RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 HSDL1Q3SXM5 330 aa26.45■■□□□ 1.82
VRK2-202ENST00000412104 EAPPQ56P03 285 aaPredicted RBP26.45■■□□□ 1.82
VRK2-202ENST00000412104 WDR78Q5VTH9 848 aa26.45■■□□□ 1.82
VRK2-202ENST00000412104 LMBRD2Q68DH5 695 aaPredicted RBP26.45■■□□□ 1.82
VRK2-202ENST00000412104 CRELD2Q6UXH1 353 aaPredicted RBP26.45■■□□□ 1.82
VRK2-202ENST00000412104 FBXO16Q8IX29 292 aaPredicted RBP26.45■■□□□ 1.82
VRK2-202ENST00000412104 RHOT2Q8IXI1 618 aa26.45■■□□□ 1.82
VRK2-202ENST00000412104 AENQ8WTP8 325 aaKnown RBP26.45■■□□□ 1.82
VRK2-202ENST00000412104 FNBP1Q96RU3 617 aa26.45■■□□□ 1.82
VRK2-202ENST00000412104 PI4K2AQ9BTU6 479 aa26.45■■□□□ 1.82
VRK2-202ENST00000412104 TARS2Q9BW92 718 aaKnown RBP26.45■■□□□ 1.82
VRK2-202ENST00000412104 MROH8Q9H579 483 aa26.45■■□□□ 1.82
VRK2-202ENST00000412104 ANKFY1Q9P2R3 1169 aa26.45■■□□□ 1.82
VRK2-202ENST00000412104 POLR3GO15318 223 aaPredicted RBP26.44■■□□□ 1.82
VRK2-202ENST00000412104 RTN2O75298 545 aa26.44■■□□□ 1.82
VRK2-202ENST00000412104 FMO1Q01740 532 aa26.44■■□□□ 1.82
VRK2-202ENST00000412104 TERF2Q15554 542 aa26.44■■□□□ 1.82
VRK2-202ENST00000412104 TRIM50Q86XT4 487 aa26.44■■□□□ 1.82
VRK2-202ENST00000412104 BBXQ8WY36 941 aaPredicted RBP26.44■■□□□ 1.82
VRK2-202ENST00000412104 GLG1Q92896 1179 aa26.44■■□□□ 1.82
VRK2-202ENST00000412104 KRT12Q99456 494 aa26.44■■□□□ 1.82
VRK2-202ENST00000412104 VIPAS39Q9H9C1 493 aa26.44■■□□□ 1.82
VRK2-202ENST00000412104 PPME1Q9Y570 386 aa26.44■■□□□ 1.82
VRK2-202ENST00000412104 NOP56O00567 594 aaKnown RBP26.43■■□□□ 1.82
VRK2-202ENST00000412104 ADCY3O60266 1144 aa26.43■■□□□ 1.82
VRK2-202ENST00000412104 LGR5O75473 907 aa26.43■■□□□ 1.82
VRK2-202ENST00000412104 CYP11B1P15538 503 aa26.43■■□□□ 1.82
VRK2-202ENST00000412104 MARK3P27448 753 aa26.43■■□□□ 1.82
VRK2-202ENST00000412104 TNFRSF8P28908 595 aa26.43■■□□□ 1.82
VRK2-202ENST00000412104 PDE6CP51160 858 aa26.43■■□□□ 1.82
VRK2-202ENST00000412104 ERVK-9P63128 1117 aa26.43■■□□□ 1.82
VRK2-202ENST00000412104 GCNT1Q02742 428 aa26.43■■□□□ 1.82
VRK2-202ENST00000412104 LDLRAD1Q5T700 205 aa26.43■■□□□ 1.82
VRK2-202ENST00000412104 DHX38Q92620 1227 aaKnown RBP26.43■■□□□ 1.82
VRK2-202ENST00000412104 MSTO1Q9BUK6 570 aa26.43■■□□□ 1.82
VRK2-202ENST00000412104 PGRMC1O00264 195 aaKnown RBP26.43■■□□□ 1.82
VRK2-202ENST00000412104 MMEP08473 750 aa26.43■■□□□ 1.82
VRK2-202ENST00000412104 GZMAP12544 262 aa26.43■■□□□ 1.82
VRK2-202ENST00000412104 TNNI1P19237 187 aa26.43■■□□□ 1.82
VRK2-202ENST00000412104 HADHBP55084 474 aaKnown RBP26.43■■□□□ 1.82
VRK2-202ENST00000412104 TNNC1P63316 161 aa26.43■■□□□ 1.82
VRK2-202ENST00000412104 SNAPC2Q13487 334 aa26.43■■□□□ 1.82
VRK2-202ENST00000412104 ZACNQ401N2 412 aa26.43■■□□□ 1.82
VRK2-202ENST00000412104 ENOSF1Q7L5Y1 443 aa26.43■■□□□ 1.82
VRK2-202ENST00000412104 GDAP1L1Q96MZ0 367 aa26.43■■□□□ 1.82
VRK2-202ENST00000412104 C1orf112Q9NSG2 853 aa26.43■■□□□ 1.82
VRK2-202ENST00000412104 NOC2LQ9Y3T9 749 aaKnown RBP26.43■■□□□ 1.82
VRK2-202ENST00000412104 SCN4AP35499 1836 aa26.42■■□□□ 1.82
VRK2-202ENST00000412104 A0A0B4J269 797 aa26.42■■□□□ 1.82
VRK2-202ENST00000412104 TCEAL1Q15170 157 aa26.42■■□□□ 1.82
VRK2-202ENST00000412104 ZBTB41Q5SVQ8 909 aa26.42■■□□□ 1.82
VRK2-202ENST00000412104 RASGEF1CQ8N431 466 aa26.42■■□□□ 1.82
VRK2-202ENST00000412104 MORC4Q8TE76 937 aa26.42■■□□□ 1.82
VRK2-202ENST00000412104 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.42■■□□□ 1.82
VRK2-202ENST00000412104 ACBD3Q9H3P7 528 aa26.42■■□□□ 1.82
VRK2-202ENST00000412104 RBAKQ9NYW8 714 aaPredicted RBP26.42■■□□□ 1.82
VRK2-202ENST00000412104 PTPRJQ12913 1337 aa26.42■■□□□ 1.82
VRK2-202ENST00000412104 ADGRA2Q96PE1 1338 aa26.42■■□□□ 1.82
VRK2-202ENST00000412104 A0A0U1RQG5 324 aaPredicted RBP26.41■■□□□ 1.82
VRK2-202ENST00000412104 LDHAP00338 332 aaKnown RBP26.41■■□□□ 1.82
VRK2-202ENST00000412104 C4BPAP04003 597 aaKnown RBP26.41■■□□□ 1.82
VRK2-202ENST00000412104 GPC5P78333 572 aa26.41■■□□□ 1.82
VRK2-202ENST00000412104 CDR2Q01850 454 aa26.41■■□□□ 1.82
VRK2-202ENST00000412104 TDRD10Q5VZ19 366 aaKnown RBP26.41■■□□□ 1.82
VRK2-202ENST00000412104 PRPF31Q8WWY3 499 aaKnown RBP26.41■■□□□ 1.82
VRK2-202ENST00000412104 TAF1DQ9H5J8 278 aaPredicted RBP26.41■■□□□ 1.82
VRK2-202ENST00000412104 ZCCHC17Q9NP64 241 aaKnown RBP26.41■■□□□ 1.82
VRK2-202ENST00000412104 CTTNBP2NLQ9P2B4 639 aa26.41■■□□□ 1.82
VRK2-202ENST00000412104 HPCAL4Q9UM19 191 aa26.41■■□□□ 1.82
VRK2-202ENST00000412104 GLI1P08151 1106 aa26.41■■□□□ 1.82
VRK2-202ENST00000412104 CCDC62Q6P9F0 684 aa26.41■■□□□ 1.82
VRK2-202ENST00000412104 ATP8B4Q8TF62 1192 aa26.41■■□□□ 1.82
VRK2-202ENST00000412104 SCFD2Q8WU76 684 aa26.41■■□□□ 1.82
VRK2-202ENST00000412104 FAM81BQ96LP2 452 aa26.41■■□□□ 1.82
VRK2-202ENST00000412104 SPATA33Q96N06 139 aa26.41■■□□□ 1.82
VRK2-202ENST00000412104 ZBTB42B2RXF5 422 aa26.4■■□□□ 1.82
VRK2-202ENST00000412104 DDX3YO15523 660 aaKnown RBP26.4■■□□□ 1.82
VRK2-202ENST00000412104 HEXIM1O94992 359 aaKnown RBP26.4■■□□□ 1.82
VRK2-202ENST00000412104 HLA-DRAP01903 254 aa26.4■■□□□ 1.82
VRK2-202ENST00000412104 CYP2C8P10632 490 aa26.4■■□□□ 1.82
VRK2-202ENST00000412104 IER5Q5VY09 327 aa26.4■■□□□ 1.82
VRK2-202ENST00000412104 PLPPR4Q7Z2D5 763 aa26.4■■□□□ 1.82
VRK2-202ENST00000412104 DHX37Q8IY37 1157 aaKnown RBP26.4■■□□□ 1.82
VRK2-202ENST00000412104 SHCBP1Q8NEM2 672 aa26.4■■□□□ 1.82
VRK2-202ENST00000412104 DDX1Q92499 740 aaKnown RBP26.4■■□□□ 1.82
VRK2-202ENST00000412104 CALR3Q96L12 384 aaKnown RBP26.4■■□□□ 1.82
VRK2-202ENST00000412104 GLTPD2A6NH11 291 aa26.39■■□□□ 1.82
VRK2-202ENST00000412104 KRT5P13647 590 aa26.39■■□□□ 1.82
VRK2-202ENST00000412104 PIK3CAP42336 1068 aa26.39■■□□□ 1.82
VRK2-202ENST00000412104 COPS5Q92905 334 aa26.39■■□□□ 1.82
VRK2-202ENST00000412104 ZBTB9Q96C00 473 aa26.39■■□□□ 1.82
VRK2-202ENST00000412104 EFCC1Q9HA90 598 aa26.39■■□□□ 1.82
VRK2-202ENST00000412104 GDF3Q9NR23 364 aa26.39■■□□□ 1.82
VRK2-202ENST00000412104 EPHB4P54760 987 aa26.39■■□□□ 1.81
VRK2-202ENST00000412104 DMTNQ08495 405 aa26.39■■□□□ 1.81
VRK2-202ENST00000412104 MKRN4PQ13434 485 aaPredicted RBP26.39■■□□□ 1.81
VRK2-202ENST00000412104 BIRC3Q13489 604 aa26.39■■□□□ 1.81
VRK2-202ENST00000412104 PLCB4Q15147 1175 aa26.39■■□□□ 1.81
VRK2-202ENST00000412104 C11orf63Q6NUN7 778 aa26.39■■□□□ 1.81
VRK2-202ENST00000412104 KLHL7Q8IXQ5 586 aa26.39■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms