RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 LIG1P18858 919 aa18.24■□□□□ 0.51
SCAMP4-203ENST00000411971 PTPN5P54829 565 aa18.24■□□□□ 0.51
SCAMP4-203ENST00000411971 NCBP1Q09161 790 aaKnown RBP18.24■□□□□ 0.51
SCAMP4-203ENST00000411971 NT5DC1Q5TFE4 455 aa18.24■□□□□ 0.51
SCAMP4-203ENST00000411971 CWF19L1Q69YN2 538 aaKnown RBP18.24■□□□□ 0.51
SCAMP4-203ENST00000411971 C15orf39Q6ZRI6 1047 aa18.24■□□□□ 0.51
SCAMP4-203ENST00000411971 CCDC149Q6ZUS6 474 aa18.24■□□□□ 0.51
SCAMP4-203ENST00000411971 MCPH1Q8NEM0 835 aa18.24■□□□□ 0.51
SCAMP4-203ENST00000411971 CMASQ8NFW8 434 aaPredicted RBP18.24■□□□□ 0.51
SCAMP4-203ENST00000411971 COLEC11Q9BWP8 271 aa18.24■□□□□ 0.51
SCAMP4-203ENST00000411971 PRMT7Q9NVM4 692 aaPredicted RBP18.24■□□□□ 0.51
SCAMP4-203ENST00000411971 MYH11P35749 1972 aa18.23■□□□□ 0.51
SCAMP4-203ENST00000411971 ARHGEF35A5YM69 484 aa18.23■□□□□ 0.51
SCAMP4-203ENST00000411971 SPDYE4A6NLX3 237 aa18.23■□□□□ 0.51
SCAMP4-203ENST00000411971 PI15O43692 258 aa18.23■□□□□ 0.51
SCAMP4-203ENST00000411971 PAPLNO95428 1278 aa18.23■□□□□ 0.51
SCAMP4-203ENST00000411971 GLUD1P00367 558 aa18.23■□□□□ 0.51
SCAMP4-203ENST00000411971 PRKCBP05771 671 aa18.23■□□□□ 0.51
SCAMP4-203ENST00000411971 ADH1AP07327 375 aa18.23■□□□□ 0.51
SCAMP4-203ENST00000411971 CDC25AP30304 524 aa18.23■□□□□ 0.51
SCAMP4-203ENST00000411971 SAFBQ15424 915 aaKnown RBP eCLIP18.23■□□□□ 0.51
SCAMP4-203ENST00000411971 CD300LGQ6UXG3 332 aa18.23■□□□□ 0.51
SCAMP4-203ENST00000411971 KCNK18Q7Z418 384 aa18.23■□□□□ 0.51
SCAMP4-203ENST00000411971 DAW1Q8N136 415 aa18.23■□□□□ 0.51
SCAMP4-203ENST00000411971 PLCD3Q8N3E9 789 aa18.23■□□□□ 0.51
SCAMP4-203ENST00000411971 RIN2Q8WYP3 895 aaPredicted RBP18.23■□□□□ 0.51
SCAMP4-203ENST00000411971 PRIMPOLQ96LW4 560 aa18.23■□□□□ 0.51
SCAMP4-203ENST00000411971 BHMT2Q9H2M3 363 aa18.23■□□□□ 0.51
SCAMP4-203ENST00000411971 KCNK12Q9HB15 430 aa18.23■□□□□ 0.51
SCAMP4-203ENST00000411971 WDR6Q9NNW5 1121 aaKnown RBP18.23■□□□□ 0.51
SCAMP4-203ENST00000411971 STK39Q9UEW8 545 aa18.23■□□□□ 0.51
SCAMP4-203ENST00000411971 ZFHX2Q9C0A1 2572 aaPredicted RBP18.23■□□□□ 0.51
SCAMP4-203ENST00000411971 ZMYM2Q9UBW7 1377 aa18.22■□□□□ 0.51
SCAMP4-203ENST00000411971 MYH15Q9Y2K3 1946 aa18.22■□□□□ 0.51
SCAMP4-203ENST00000411971 ACKR2O00590 384 aa18.22■□□□□ 0.51
SCAMP4-203ENST00000411971 U2AF2P26368 475 aaKnown RBP eCLIP18.22■□□□□ 0.51
SCAMP4-203ENST00000411971 CCT6AP40227 531 aaKnown RBP18.22■□□□□ 0.51
SCAMP4-203ENST00000411971 NAMPTP43490 491 aa18.22■□□□□ 0.51
SCAMP4-203ENST00000411971 FXR2P51116 673 aaKnown RBP eCLIP18.22■□□□□ 0.51
SCAMP4-203ENST00000411971 TUSC3Q13454 348 aa18.22■□□□□ 0.51
SCAMP4-203ENST00000411971 PRPF4BQ13523 1007 aaKnown RBP18.22■□□□□ 0.51
SCAMP4-203ENST00000411971 HSP90AA2PQ14568 343 aaPredicted RBP18.22■□□□□ 0.51
SCAMP4-203ENST00000411971 USP41Q3LFD5 358 aa18.22■□□□□ 0.51
SCAMP4-203ENST00000411971 TAS1R3Q7RTX0 852 aa18.22■□□□□ 0.51
SCAMP4-203ENST00000411971 CEP120Q8N960 986 aa18.22■□□□□ 0.51
SCAMP4-203ENST00000411971 CLSTN3Q9BQT9 956 aa18.22■□□□□ 0.51
SCAMP4-203ENST00000411971 NT5C3AQ9H0P0 336 aa18.22■□□□□ 0.51
SCAMP4-203ENST00000411971 KIAA1024Q9UPX6 916 aa18.22■□□□□ 0.51
SCAMP4-203ENST00000411971 GDAQ9Y2T3 454 aa18.22■□□□□ 0.51
SCAMP4-203ENST00000411971 PDCD11Q14690 1871 aaKnown RBP18.22■□□□□ 0.51
SCAMP4-203ENST00000411971 CLUHO75153 1309 aa18.22■□□□□ 0.51
SCAMP4-203ENST00000411971 CITO14578 2027 aa18.22■□□□□ 0.51
SCAMP4-203ENST00000411971 E9PMD0 336 aa18.21■□□□□ 0.51
SCAMP4-203ENST00000411971 N4BP3O15049 544 aa18.21■□□□□ 0.51
SCAMP4-203ENST00000411971 MEFVO15553 781 aaPredicted RBP18.21■□□□□ 0.51
SCAMP4-203ENST00000411971 CD2BP2O95400 341 aaKnown RBP18.21■□□□□ 0.51
SCAMP4-203ENST00000411971 MAPK7Q13164 816 aa18.21■□□□□ 0.51
SCAMP4-203ENST00000411971 PTGDRQ13258 359 aa18.21■□□□□ 0.51
SCAMP4-203ENST00000411971 GLRA4Q5JXX5 417 aa18.21■□□□□ 0.51
SCAMP4-203ENST00000411971 OTOP3Q7RTS5 596 aa18.21■□□□□ 0.51
SCAMP4-203ENST00000411971 ZBTB8OSQ8IWT0 167 aa18.21■□□□□ 0.51
SCAMP4-203ENST00000411971 IGSF22Q8N9C0 903 aa18.21■□□□□ 0.51
SCAMP4-203ENST00000411971 LNX1Q8TBB1 728 aaPredicted RBP18.21■□□□□ 0.51
SCAMP4-203ENST00000411971 SMG7Q92540 1137 aaKnown RBP18.21■□□□□ 0.51
SCAMP4-203ENST00000411971 MMTAG2Q9BU76 263 aaKnown RBP18.21■□□□□ 0.51
SCAMP4-203ENST00000411971 DDX19AQ9NUU7 478 aaKnown RBP18.21■□□□□ 0.51
SCAMP4-203ENST00000411971 FNIP2Q9P278 1114 aa18.21■□□□□ 0.51
SCAMP4-203ENST00000411971 GALR2O43603 387 aaPredicted RBP18.2■□□□□ 0.5
SCAMP4-203ENST00000411971 TADA2AO75478 443 aa18.2■□□□□ 0.5
SCAMP4-203ENST00000411971 RBM25P49756 843 aaKnown RBP18.2■□□□□ 0.5
SCAMP4-203ENST00000411971 NTHL1P78549 312 aa18.2■□□□□ 0.5
SCAMP4-203ENST00000411971 ORC2Q13416 577 aaPredicted RBP18.2■□□□□ 0.5
SCAMP4-203ENST00000411971 MAPK6Q16659 721 aa18.2■□□□□ 0.5
SCAMP4-203ENST00000411971 RSPO2Q6UXX9 243 aaPredicted RBP18.2■□□□□ 0.5
SCAMP4-203ENST00000411971 HACE1Q8IYU2 909 aa18.2■□□□□ 0.5
SCAMP4-203ENST00000411971 TMEM130Q8N3G9 435 aa18.2■□□□□ 0.5
SCAMP4-203ENST00000411971 ERMNQ8TAM6 284 aa18.2■□□□□ 0.5
SCAMP4-203ENST00000411971 DEPTORQ8TB45 409 aa18.2■□□□□ 0.5
SCAMP4-203ENST00000411971 ACSF2Q96CM8 615 aaPredicted RBP18.2■□□□□ 0.5
SCAMP4-203ENST00000411971 RUSC1Q9BVN2 902 aa18.2■□□□□ 0.5
SCAMP4-203ENST00000411971 GOLGA2P5Q9HBQ8 144 aa18.2■□□□□ 0.5
SCAMP4-203ENST00000411971 LRWD1Q9UFC0 647 aa18.2■□□□□ 0.5
SCAMP4-203ENST00000411971 SSX2IPQ9Y2D8 614 aa18.2■□□□□ 0.5
SCAMP4-203ENST00000411971 THP07101 528 aa18.19■□□□□ 0.5
SCAMP4-203ENST00000411971 GBP2P32456 591 aaPredicted RBP18.19■□□□□ 0.5
SCAMP4-203ENST00000411971 HMGN5P82970 282 aaKnown RBP18.19■□□□□ 0.5
SCAMP4-203ENST00000411971 SOX4Q06945 474 aaPredicted RBP18.19■□□□□ 0.5
SCAMP4-203ENST00000411971 TDGQ13569 410 aa18.19■□□□□ 0.5
SCAMP4-203ENST00000411971 FAM171A1Q5VUB5 890 aa18.19■□□□□ 0.5
SCAMP4-203ENST00000411971 ASTLQ6HA08 431 aaPredicted RBP18.19■□□□□ 0.5
SCAMP4-203ENST00000411971 C3orf58Q8NDZ4 430 aa18.19■□□□□ 0.5
SCAMP4-203ENST00000411971 ZSCAN31Q96LW9 406 aaPredicted RBP18.19■□□□□ 0.5
SCAMP4-203ENST00000411971 PPP1R10Q96QC0 940 aaKnown RBP18.19■□□□□ 0.5
SCAMP4-203ENST00000411971 RHOBTB2Q9BYZ6 727 aa18.19■□□□□ 0.5
SCAMP4-203ENST00000411971 C2orf40Q9H1Z8 148 aa18.19■□□□□ 0.5
SCAMP4-203ENST00000411971 DUSP12Q9UNI6 340 aa18.19■□□□□ 0.5
SCAMP4-203ENST00000411971 KRBA1A5PL33 1030 aa18.18■□□□□ 0.5
SCAMP4-203ENST00000411971 ABLIM1O14639 778 aa18.18■□□□□ 0.5
SCAMP4-203ENST00000411971 NR1I2O75469 434 aa18.18■□□□□ 0.5
SCAMP4-203ENST00000411971 ZMYND10O75800 440 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms