RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 USP38Q8NB14 1042 aa14.64□□□□□ -0.07
LIMS1-205ENST00000410093 DEPTORQ8TB45 409 aa14.64□□□□□ -0.07
LIMS1-205ENST00000410093 FAM71BQ8TC56 605 aa14.64□□□□□ -0.07
LIMS1-205ENST00000410093 ZNF296Q8WUU4 475 aaPredicted RBP14.64□□□□□ -0.07
LIMS1-205ENST00000410093 BSNDQ8WZ55 320 aa14.64□□□□□ -0.07
LIMS1-205ENST00000410093 HES6Q96HZ4 224 aa14.64□□□□□ -0.07
LIMS1-205ENST00000410093 ASCC2Q9H1I8 757 aaPredicted RBP14.64□□□□□ -0.07
LIMS1-205ENST00000410093 AZI2Q9H6S1 392 aa14.64□□□□□ -0.07
LIMS1-205ENST00000410093 PNMA3Q9UL41 463 aa14.64□□□□□ -0.07
LIMS1-205ENST00000410093 CCL15-CCL14A0A0B4J2E2 113 aa14.63□□□□□ -0.07
LIMS1-205ENST00000410093 LRRIQ3A6PVS8 624 aaPredicted RBP14.63□□□□□ -0.07
LIMS1-205ENST00000410093 K7ERI5 159 aa14.63□□□□□ -0.07
LIMS1-205ENST00000410093 PGRMC1O00264 195 aaKnown RBP14.63□□□□□ -0.07
LIMS1-205ENST00000410093 KCNK3O14649 394 aa14.63□□□□□ -0.07
LIMS1-205ENST00000410093 NCK2O43639 380 aa14.63□□□□□ -0.07
LIMS1-205ENST00000410093 UBA1P22314 1058 aaKnown RBP14.63□□□□□ -0.07
LIMS1-205ENST00000410093 GJA5P36382 358 aa14.63□□□□□ -0.07
LIMS1-205ENST00000410093 STAT5BP51692 787 aa14.63□□□□□ -0.07
LIMS1-205ENST00000410093 GPC5P78333 572 aa14.63□□□□□ -0.07
LIMS1-205ENST00000410093 SP2Q02086 613 aa14.63□□□□□ -0.07
LIMS1-205ENST00000410093 SURF1Q15526 300 aa14.63□□□□□ -0.07
LIMS1-205ENST00000410093 TARBP2Q15633 366 aaKnown RBP14.63□□□□□ -0.07
LIMS1-205ENST00000410093 CCL15Q16663 113 aa14.63□□□□□ -0.07
LIMS1-205ENST00000410093 IER5Q5VY09 327 aa14.63□□□□□ -0.07
LIMS1-205ENST00000410093 ZPBP2Q6X784 338 aa14.63□□□□□ -0.07
LIMS1-205ENST00000410093 SEPT14Q6ZU15 432 aa14.63□□□□□ -0.07
LIMS1-205ENST00000410093 DAAM2Q86T65 1068 aa14.63□□□□□ -0.07
LIMS1-205ENST00000410093 GOLGA6L1Q8N7Z2 621 aa14.63□□□□□ -0.07
LIMS1-205ENST00000410093 OLIG1Q8TAK6 271 aa14.63□□□□□ -0.07
LIMS1-205ENST00000410093 SLC35G2Q8TBE7 412 aa14.63□□□□□ -0.07
LIMS1-205ENST00000410093 PSPC1Q8WXF1 523 aaKnown RBP14.63□□□□□ -0.07
LIMS1-205ENST00000410093 BBXQ8WY36 941 aaPredicted RBP14.63□□□□□ -0.07
LIMS1-205ENST00000410093 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.63□□□□□ -0.07
LIMS1-205ENST00000410093 CFHR5Q9BXR6 569 aa14.63□□□□□ -0.07
LIMS1-205ENST00000410093 CARD9Q9H257 536 aa14.63□□□□□ -0.07
LIMS1-205ENST00000410093 GSTTP1A0A1W2PQM5 241 aa14.62□□□□□ -0.07
LIMS1-205ENST00000410093 SOWAHBA6NEL2 793 aa14.62□□□□□ -0.07
LIMS1-205ENST00000410093 MAFO75444 373 aaPredicted RBP14.62□□□□□ -0.07
LIMS1-205ENST00000410093 LGR5O75473 907 aa14.62□□□□□ -0.07
LIMS1-205ENST00000410093 CETPP11597 493 aa14.62□□□□□ -0.07
LIMS1-205ENST00000410093 CXCR5P32302 372 aa14.62□□□□□ -0.07
LIMS1-205ENST00000410093 PDE6CP51160 858 aa14.62□□□□□ -0.07
LIMS1-205ENST00000410093 CNTN2Q02246 1040 aa14.62□□□□□ -0.07
LIMS1-205ENST00000410093 DMTNQ08495 405 aa14.62□□□□□ -0.07
LIMS1-205ENST00000410093 SNAPC2Q13487 334 aa14.62□□□□□ -0.07
LIMS1-205ENST00000410093 MXD4Q14582 209 aaPredicted RBP14.62□□□□□ -0.07
LIMS1-205ENST00000410093 KCTD2Q14681 263 aa14.62□□□□□ -0.07
LIMS1-205ENST00000410093 PKN2Q16513 984 aaKnown RBP14.62□□□□□ -0.07
LIMS1-205ENST00000410093 WDR44Q5JSH3 913 aa14.62□□□□□ -0.07
LIMS1-205ENST00000410093 SLC39A4Q6P5W5 647 aa14.62□□□□□ -0.07
LIMS1-205ENST00000410093 C15orf39Q6ZRI6 1047 aa14.62□□□□□ -0.07
LIMS1-205ENST00000410093 NT5DC3Q86UY8 548 aa14.62□□□□□ -0.07
LIMS1-205ENST00000410093 PLEKHO2Q8TD55 490 aa14.62□□□□□ -0.07
LIMS1-205ENST00000410093 AENQ8WTP8 325 aaKnown RBP14.62□□□□□ -0.07
LIMS1-205ENST00000410093 SCFD2Q8WU76 684 aa14.62□□□□□ -0.07
LIMS1-205ENST00000410093 CAVIN3Q969G5 261 aa14.62□□□□□ -0.07
LIMS1-205ENST00000410093 TRIM11Q96F44 468 aa14.62□□□□□ -0.07
LIMS1-205ENST00000410093 FNBP1Q96RU3 617 aa14.62□□□□□ -0.07
LIMS1-205ENST00000410093 RPS6KC1Q96S38 1066 aa14.62□□□□□ -0.07
LIMS1-205ENST00000410093 CEP89Q96ST8 783 aa14.62□□□□□ -0.07
LIMS1-205ENST00000410093 LRRC1Q9BTT6 524 aa14.62□□□□□ -0.07
LIMS1-205ENST00000410093 C2orf40Q9H1Z8 148 aa14.62□□□□□ -0.07
LIMS1-205ENST00000410093 SLITRK6Q9H5Y7 841 aa14.62□□□□□ -0.07
LIMS1-205ENST00000410093 AGO2Q9UKV8 859 aaKnown RBP14.62□□□□□ -0.07
LIMS1-205ENST00000410093 DNAJC25-GNG10A0A024R161 153 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 ASB14A6NK59 587 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 TISP43B9A030 160 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 IGF2BP3O00425 579 aaKnown RBP eCLIP14.61□□□□□ -0.07
LIMS1-205ENST00000410093 ATP4AP20648 1035 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 OAS2P29728 719 aaKnown RBP14.61□□□□□ -0.07
LIMS1-205ENST00000410093 CDR2Q01850 454 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 PAK2Q13177 524 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 SV2AQ7L0J3 742 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 ARHGEF19Q8IW93 802 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 PPM1KQ8N3J5 372 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 HELQQ8TDG4 1101 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 EPS8L1Q8TE68 723 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 CNKSR2Q8WXI2 1034 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 CCDC127Q96BQ5 260 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 SH2D3AQ9BRG2 576 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 GDF3Q9NR23 364 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 C1orf112Q9NSG2 853 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 RBM12Q9NTZ6 932 aaKnown RBP14.61□□□□□ -0.07
LIMS1-205ENST00000410093 PSD3Q9NYI0 1048 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 UVRAGQ9P2Y5 699 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 SLC45A1Q9Y2W3 748 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 ADGRA3Q8IWK6 1321 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 ZNFX1Q9P2E3 1918 aaKnown RBP14.61□□□□□ -0.07
LIMS1-205ENST00000410093 GOLGA8IPA6NC78 632 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 GOLGA8JA6NMD2 632 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 TMCO5BA8MYB1 307 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 ADCY3O60266 1144 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 LRRN2O75325 713 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 MYBL1P10243 752 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 GLRA2P23416 452 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 PRPF4BQ13523 1007 aaKnown RBP14.61□□□□□ -0.07
LIMS1-205ENST00000410093 CUL1Q13616 776 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 ALS2CLQ60I27 953 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 MAATS1Q7Z4T9 603 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 GPIHBP1Q8IV16 184 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms