RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 RASGEF1CQ8N431 466 aa21.68■■□□□ 1.06
USP39-204ENST00000409766 SCFD2Q8WU76 684 aa21.68■■□□□ 1.06
USP39-204ENST00000409766 ZBTB45Q96K62 511 aaPredicted RBP21.68■■□□□ 1.06
USP39-204ENST00000409766 GPR20Q99678 358 aa21.68■■□□□ 1.06
USP39-204ENST00000409766 FAM170AA1A519 330 aa21.68■■□□□ 1.06
USP39-204ENST00000409766 EDN1P05305 212 aa21.68■■□□□ 1.06
USP39-204ENST00000409766 CYP11B1P15538 503 aa21.68■■□□□ 1.06
USP39-204ENST00000409766 TNNT3P45378 269 aaPredicted RBP21.68■■□□□ 1.06
USP39-204ENST00000409766 ACOT2P49753 483 aa21.68■■□□□ 1.06
USP39-204ENST00000409766 FMO1Q01740 532 aa21.68■■□□□ 1.06
USP39-204ENST00000409766 DMTNQ08495 405 aa21.68■■□□□ 1.06
USP39-204ENST00000409766 HSDL1Q3SXM5 330 aa21.68■■□□□ 1.06
USP39-204ENST00000409766 CELF3Q5SZQ8 465 aaKnown RBP21.68■■□□□ 1.06
USP39-204ENST00000409766 TAF3Q5VWG9 929 aa21.68■■□□□ 1.06
USP39-204ENST00000409766 ARMC9Q7Z3E5 817 aa21.68■■□□□ 1.06
USP39-204ENST00000409766 FAM84AQ96KN4 292 aa21.68■■□□□ 1.06
USP39-204ENST00000409766 FAM167AQ96KS9 214 aa21.68■■□□□ 1.06
USP39-204ENST00000409766 KRT12Q99456 494 aa21.68■■□□□ 1.06
USP39-204ENST00000409766 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.68■■□□□ 1.063e-12■■□□□ 13.8
USP39-204ENST00000409766 TARS2Q9BW92 718 aaKnown RBP21.68■■□□□ 1.06
USP39-204ENST00000409766 AZI2Q9H6S1 392 aa21.68■■□□□ 1.06
USP39-204ENST00000409766 PPME1Q9Y570 386 aa21.68■■□□□ 1.06
USP39-204ENST00000409766 A0A0B4J269 797 aa21.67■■□□□ 1.06
USP39-204ENST00000409766 ADCY3O60266 1144 aa21.67■■□□□ 1.06
USP39-204ENST00000409766 LGR5O75473 907 aa21.67■■□□□ 1.06
USP39-204ENST00000409766 GLI1P08151 1106 aa21.67■■□□□ 1.06
USP39-204ENST00000409766 DRP2Q13474 957 aa21.67■■□□□ 1.06
USP39-204ENST00000409766 ZACNQ401N2 412 aa21.67■■□□□ 1.06
USP39-204ENST00000409766 ENOSF1Q7L5Y1 443 aa21.67■■□□□ 1.06
USP39-204ENST00000409766 ELMO3Q96BJ8 720 aa21.67■■□□□ 1.06
USP39-204ENST00000409766 CALR3Q96L12 384 aaKnown RBP21.67■■□□□ 1.06
USP39-204ENST00000409766 GDAP1L1Q96MZ0 367 aa21.67■■□□□ 1.06
USP39-204ENST00000409766 FNBP1Q96RU3 617 aa21.67■■□□□ 1.06
USP39-204ENST00000409766 PI4K2AQ9BTU6 479 aa21.67■■□□□ 1.06
USP39-204ENST00000409766 MROH8Q9H579 483 aa21.67■■□□□ 1.06
USP39-204ENST00000409766 HPCAL4Q9UM19 191 aa21.67■■□□□ 1.06
USP39-204ENST00000409766 PGRMC1O00264 195 aaKnown RBP21.67■■□□□ 1.06
USP39-204ENST00000409766 C4BPAP04003 597 aaKnown RBP21.67■■□□□ 1.06
USP39-204ENST00000409766 MMEP08473 750 aa21.67■■□□□ 1.06
USP39-204ENST00000409766 GJA5P36382 358 aa21.67■■□□□ 1.06
USP39-204ENST00000409766 TNNC1P63316 161 aa21.67■■□□□ 1.06
USP39-204ENST00000409766 GPC5P78333 572 aa21.67■■□□□ 1.06
USP39-204ENST00000409766 LDLRAD1Q5T700 205 aa21.67■■□□□ 1.06
USP39-204ENST00000409766 MORC4Q8TE76 937 aa21.67■■□□□ 1.06
USP39-204ENST00000409766 BBXQ8WY36 941 aaPredicted RBP21.67■■□□□ 1.06
USP39-204ENST00000409766 DHX38Q92620 1227 aaKnown RBP21.67■■□□□ 1.06
USP39-204ENST00000409766 ACBD3Q9H3P7 528 aa21.67■■□□□ 1.06
USP39-204ENST00000409766 GDF3Q9NR23 364 aa21.67■■□□□ 1.06
USP39-204ENST00000409766 ADGRA2Q96PE1 1338 aa21.66■■□□□ 1.06
USP39-204ENST00000409766 LDHAP00338 332 aaKnown RBP21.66■■□□□ 1.06
USP39-204ENST00000409766 FAM193AP78312 1265 aa21.66■■□□□ 1.06
USP39-204ENST00000409766 CDR2Q01850 454 aa21.66■■□□□ 1.06
USP39-204ENST00000409766 LMBRD2Q68DH5 695 aaPredicted RBP21.66■■□□□ 1.06
USP39-204ENST00000409766 CCDC62Q6P9F0 684 aa21.66■■□□□ 1.06
USP39-204ENST00000409766 PRPF31Q8WWY3 499 aaKnown RBP21.66■■□□□ 1.06
USP39-204ENST00000409766 DDX1Q92499 740 aaKnown RBP21.66■■□□□ 1.06
USP39-204ENST00000409766 GLG1Q92896 1179 aa21.66■■□□□ 1.06
USP39-204ENST00000409766 NOC2LQ9Y3T9 749 aaKnown RBP21.66■■□□□ 1.06
USP39-204ENST00000409766 PTPRJQ12913 1337 aa21.65■■□□□ 1.06
USP39-204ENST00000409766 ZC3H4Q9UPT8 1303 aaKnown RBP21.65■■□□□ 1.06
USP39-204ENST00000409766 DDX3YO15523 660 aaKnown RBP21.65■■□□□ 1.06
USP39-204ENST00000409766 TNNI1P19237 187 aa21.65■■□□□ 1.06
USP39-204ENST00000409766 AARSP49588 968 aaKnown RBP eCLIP21.65■■□□□ 1.06
USP39-204ENST00000409766 PDE6CP51160 858 aa21.65■■□□□ 1.06
USP39-204ENST00000409766 GPR162Q16538 588 aa21.65■■□□□ 1.06
USP39-204ENST00000409766 TDRD10Q5VZ19 366 aaKnown RBP21.65■■□□□ 1.06
USP39-204ENST00000409766 IFT20Q8IY31 132 aa21.65■■□□□ 1.06
USP39-204ENST00000409766 FAM81BQ96LP2 452 aa21.65■■□□□ 1.06
USP39-204ENST00000409766 MSTO1Q9BUK6 570 aa21.65■■□□□ 1.06
USP39-204ENST00000409766 RBAKQ9NYW8 714 aaPredicted RBP21.65■■□□□ 1.06
USP39-204ENST00000409766 ANKFY1Q9P2R3 1169 aa21.65■■□□□ 1.06
USP39-204ENST00000409766 ZBTB42B2RXF5 422 aa21.65■■□□□ 1.06
USP39-204ENST00000409766 HEXIM1O94992 359 aaKnown RBP21.65■■□□□ 1.06
USP39-204ENST00000409766 EPHB4P54760 987 aa21.65■■□□□ 1.06
USP39-204ENST00000409766 ERVK-9P63128 1117 aa21.65■■□□□ 1.06
USP39-204ENST00000409766 ZBTB41Q5SVQ8 909 aa21.65■■□□□ 1.06
USP39-204ENST00000409766 PLPPR4Q7Z2D5 763 aa21.65■■□□□ 1.06
USP39-204ENST00000409766 TRIM50Q86XT4 487 aa21.65■■□□□ 1.06
USP39-204ENST00000409766 FBXO16Q8IX29 292 aaPredicted RBP21.65■■□□□ 1.06
USP39-204ENST00000409766 C1orf112Q9NSG2 853 aa21.65■■□□□ 1.06
USP39-204ENST00000409766 CTTNBP2NLQ9P2B4 639 aa21.65■■□□□ 1.06
USP39-204ENST00000409766 TTC7AQ9ULT0 858 aaPredicted RBP21.65■■□□□ 1.06
USP39-204ENST00000409766 A0A0U1RQG5 324 aaPredicted RBP21.64■■□□□ 1.05
USP39-204ENST00000409766 NOP56O00567 594 aaKnown RBP21.64■■□□□ 1.05
USP39-204ENST00000409766 GRIN3BO60391 1043 aa21.64■■□□□ 1.05
USP39-204ENST00000409766 MARK3P27448 753 aa21.64■■□□□ 1.05
USP39-204ENST00000409766 MKRN4PQ13434 485 aaPredicted RBP21.64■■□□□ 1.05
USP39-204ENST00000409766 SNAPC2Q13487 334 aa21.64■■□□□ 1.05
USP39-204ENST00000409766 IER5Q5VY09 327 aa21.64■■□□□ 1.05
USP39-204ENST00000409766 C11orf63Q6NUN7 778 aa21.64■■□□□ 1.05
USP39-204ENST00000409766 GLTPD2A6NH11 291 aa21.63■■□□□ 1.05
USP39-204ENST00000409766 RAD51CO43502 376 aa21.63■■□□□ 1.05
USP39-204ENST00000409766 MTA2O94776 668 aa21.63■■□□□ 1.05
USP39-204ENST00000409766 HLA-DRAP01903 254 aa21.63■■□□□ 1.05
USP39-204ENST00000409766 EFNA5P52803 228 aa21.63■■□□□ 1.05
USP39-204ENST00000409766 WDR78Q5VTH9 848 aa21.63■■□□□ 1.05
USP39-204ENST00000409766 DCAF12L1Q5VU92 463 aa21.63■■□□□ 1.05
USP39-204ENST00000409766 EMBQ6PCB8 327 aa21.63■■□□□ 1.05
USP39-204ENST00000409766 ZPBP2Q6X784 338 aa21.63■■□□□ 1.05
USP39-204ENST00000409766 KLHL7Q8IXQ5 586 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms