RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 GLB1LQ6UWU2 654 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 ARRDC4Q8NCT1 418 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 CCNYQ8ND76 341 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 MAML3Q96JK9 1138 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 EPC1Q9H2F5 836 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 PRMT7Q9NVM4 692 aaPredicted RBP12.22□□□□□ -0.45
SNX13-202ENST00000409604 PCDH10Q9P2E7 1040 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 ZNF536O15090 1300 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 CHD4Q14839 1912 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 CCDC85CA6NKD9 419 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 SERPING1P05155 500 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 ATXN8OSP0DMR3 200 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 ACAT1P24752 427 aaKnown RBP12.22□□□□□ -0.45
SNX13-202ENST00000409604 NOP14P78316 857 aaKnown RBP12.22□□□□□ -0.45
SNX13-202ENST00000409604 NME3Q13232 169 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 PPP2R5CQ13362 524 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 NAA30Q147X3 362 aaPredicted RBP12.22□□□□□ -0.45
SNX13-202ENST00000409604 E2F4Q16254 413 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 CCDC117Q8IWD4 279 aaPredicted RBP12.22□□□□□ -0.45
SNX13-202ENST00000409604 SOCS4Q8WXH5 440 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 RNF25Q96BH1 459 aaPredicted RBP12.22□□□□□ -0.45
SNX13-202ENST00000409604 INPP4AQ96PE3 977 aaPredicted RBP12.22□□□□□ -0.45
SNX13-202ENST00000409604 HSD17B14Q9BPX1 270 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 LBHD1Q9BQE6 289 aaPredicted RBP12.22□□□□□ -0.45
SNX13-202ENST00000409604 STIM2Q9P246 746 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 URB1O60287 2271 aaKnown RBP12.22□□□□□ -0.45
SNX13-202ENST00000409604 PIK3CDO00329 1044 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 FARP2O94887 1054 aaPredicted RBP12.22□□□□□ -0.45
SNX13-202ENST00000409604 HSD17B4P51659 736 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 SLC12A3P55017 1021 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 BPIFB4P59827 614 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 DLG4P78352 724 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 SYCP2LQ5T4T6 812 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 C4orf32Q8N8J7 132 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 UBLCP1Q8WVY7 318 aaPredicted RBP12.22□□□□□ -0.45
SNX13-202ENST00000409604 FAM118BQ9BPY3 351 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 ZNF148Q9UQR1 794 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 RRN3P2A6NIE6 340 aa12.21□□□□□ -0.45
SNX13-202ENST00000409604 GOLGA8CPA6NN73 597 aa12.21□□□□□ -0.45
SNX13-202ENST00000409604 TREHO43280 583 aa12.21□□□□□ -0.45
SNX13-202ENST00000409604 EVI5O60447 810 aa12.21□□□□□ -0.45
SNX13-202ENST00000409604 GRK4P32298 578 aa12.21□□□□□ -0.45
SNX13-202ENST00000409604 CALCOCO2Q13137 446 aa12.21□□□□□ -0.45
SNX13-202ENST00000409604 NBPF20Q3BBV1 942 aa12.21□□□□□ -0.45
SNX13-202ENST00000409604 HS1BP3Q53T59 392 aa12.21□□□□□ -0.45
SNX13-202ENST00000409604 FERMT1Q9BQL6 677 aa12.21□□□□□ -0.45
SNX13-202ENST00000409604 SLC15A5A6NIM6 579 aa12.21□□□□□ -0.45
SNX13-202ENST00000409604 SPATA31C2B4DYI2 1134 aa12.21□□□□□ -0.45
SNX13-202ENST00000409604 SMPD1P17405 629 aa12.21□□□□□ -0.45
SNX13-202ENST00000409604 ARL1P40616 181 aaPredicted RBP12.21□□□□□ -0.45
SNX13-202ENST00000409604 MYL6P60660 151 aa12.21□□□□□ -0.45
SNX13-202ENST00000409604 IQSEC1Q6DN90 963 aa12.21□□□□□ -0.45
SNX13-202ENST00000409604 NOTUMQ6P988 496 aa12.21□□□□□ -0.45
SNX13-202ENST00000409604 CEP112Q8N8E3 955 aa12.21□□□□□ -0.45
SNX13-202ENST00000409604 PCSK9Q8NBP7 692 aaKnown RBP12.21□□□□□ -0.45
SNX13-202ENST00000409604 NPLOC4Q8TAT6 608 aa12.21□□□□□ -0.45
SNX13-202ENST00000409604 KAT5Q92993 513 aa12.21□□□□□ -0.45
SNX13-202ENST00000409604 ACSF2Q96CM8 615 aaPredicted RBP12.21□□□□□ -0.45
SNX13-202ENST00000409604 GAD1Q99259 594 aa12.21□□□□□ -0.45
SNX13-202ENST00000409604 KIAA1586Q9HCI6 787 aa12.21□□□□□ -0.45
SNX13-202ENST00000409604 TMEM39AQ9NV64 488 aa12.21□□□□□ -0.45
SNX13-202ENST00000409604 MAP3K20Q9NYL2 800 aaKnown RBP12.21□□□□□ -0.45
SNX13-202ENST00000409604 WRAP73Q9P2S5 460 aaPredicted RBP12.21□□□□□ -0.45
SNX13-202ENST00000409604 GABRQQ9UN88 632 aa12.21□□□□□ -0.45
SNX13-202ENST00000409604 FOXN3O00409 490 aaPredicted RBP12.21□□□□□ -0.46
SNX13-202ENST00000409604 GYPCP04921 128 aa12.21□□□□□ -0.46
SNX13-202ENST00000409604 ZBTB48P10074 688 aaPredicted RBP12.21□□□□□ -0.46
SNX13-202ENST00000409604 BRD2P25440 801 aaKnown RBP12.21□□□□□ -0.46
SNX13-202ENST00000409604 SLC7A5Q01650 507 aa12.21□□□□□ -0.46
SNX13-202ENST00000409604 ARSHQ5FYA8 562 aa12.21□□□□□ -0.46
SNX13-202ENST00000409604 C1orf186Q6ZWK4 172 aa12.21□□□□□ -0.46
SNX13-202ENST00000409604 TATDN2Q93075 761 aa12.21□□□□□ -0.46
SNX13-202ENST00000409604 HPDLQ96IR7 371 aa12.21□□□□□ -0.46
SNX13-202ENST00000409604 ARFGAP3Q9NP61 516 aa12.21□□□□□ -0.46
SNX13-202ENST00000409604 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.2□□□□□ -0.46
SNX13-202ENST00000409604 NT5C1B-RDH14C9J2C7 533 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 PI4K2BG5E9Z4 385 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 SCAMP3O14828 347 aaKnown RBP12.2□□□□□ -0.46
SNX13-202ENST00000409604 CYP3A4P08684 503 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 GLRA2P23416 452 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 PSMC1P62191 440 aaKnown RBP12.2□□□□□ -0.46
SNX13-202ENST00000409604 EEF1DP3Q658K8 133 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 SV2AQ7L0J3 742 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 FMNL3Q8IVF7 1028 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 ERO1AQ96HE7 468 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 PGLYRP2Q96PD5 576 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 PPANQ9NQ55 473 aaKnown RBP12.2□□□□□ -0.46
SNX13-202ENST00000409604 SMARCAL1Q9NZC9 954 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 CEP72Q9P209 647 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 MAP3K6O95382 1288 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 SMIM10L2AP0DMW4 78 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 SMIM10L2BP0DMW5 78 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 TNFSF9P41273 254 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 RWDD4Q6NW29 188 aaKnown RBP12.2□□□□□ -0.46
SNX13-202ENST00000409604 FRMD5Q7Z6J6 570 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 ACOT1Q86TX2 421 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 TRIM58Q8NG06 486 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 SPIRE2Q8WWL2 714 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 APBA2Q99767 749 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 MTG1Q9BT17 334 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms