RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 ADPGKQ9BRR6 497 aa17■□□□□ 0.31
SHANK2-204ENST00000409530 TRIM6Q9C030 488 aaPredicted RBP17■□□□□ 0.31
SHANK2-204ENST00000409530 IMPACTQ9P2X3 320 aa17■□□□□ 0.31
SHANK2-204ENST00000409530 SIK3Q9Y2K2 1263 aa17■□□□□ 0.31
SHANK2-204ENST00000409530 TTC26A0AVF1 554 aa16.99■□□□□ 0.31
SHANK2-204ENST00000409530 PROZP22891 400 aa16.99■□□□□ 0.31
SHANK2-204ENST00000409530 NCBP1Q09161 790 aaKnown RBP16.99■□□□□ 0.31
SHANK2-204ENST00000409530 FAM187BQ17R55 369 aa16.99■□□□□ 0.31
SHANK2-204ENST00000409530 EXOC3L4Q17RC7 722 aa16.99■□□□□ 0.31
SHANK2-204ENST00000409530 ZNF618Q5T7W0 954 aa16.99■□□□□ 0.31
SHANK2-204ENST00000409530 GJB7Q6PEY0 223 aa16.99■□□□□ 0.31
SHANK2-204ENST00000409530 NME8Q8N427 588 aa16.99■□□□□ 0.31
SHANK2-204ENST00000409530 NEK11Q8NG66 645 aa16.99■□□□□ 0.31
SHANK2-204ENST00000409530 PARD3BQ8TEW8 1205 aa16.99■□□□□ 0.31
SHANK2-204ENST00000409530 ERGIC2Q96RQ1 377 aa16.99■□□□□ 0.31
SHANK2-204ENST00000409530 PTPRHQ9HD43 1115 aa16.99■□□□□ 0.31
SHANK2-204ENST00000409530 AGPAT5Q9NUQ2 364 aa16.99■□□□□ 0.31
SHANK2-204ENST00000409530 OGDHLQ9ULD0 1010 aa16.99■□□□□ 0.31
SHANK2-204ENST00000409530 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.99■□□□□ 0.31
SHANK2-204ENST00000409530 A0A1W2PQC6 194 aa16.99■□□□□ 0.31
SHANK2-204ENST00000409530 ARVCFO00192 962 aa16.99■□□□□ 0.31
SHANK2-204ENST00000409530 FAM189A1O60320 539 aa16.99■□□□□ 0.31
SHANK2-204ENST00000409530 RPS6KA5O75582 802 aa16.99■□□□□ 0.31
SHANK2-204ENST00000409530 LDHAP00338 332 aaKnown RBP16.99■□□□□ 0.31
SHANK2-204ENST00000409530 TBX2Q13207 712 aaPredicted RBP16.99■□□□□ 0.31
SHANK2-204ENST00000409530 BIRC3Q13489 604 aa16.99■□□□□ 0.31
SHANK2-204ENST00000409530 ITIH6Q6UXX5 1313 aa16.99■□□□□ 0.31
SHANK2-204ENST00000409530 AKR1B15C9JRZ8 316 aaPredicted RBP16.98■□□□□ 0.31
SHANK2-204ENST00000409530 HOXA11P31270 313 aaPredicted RBP16.98■□□□□ 0.31
SHANK2-204ENST00000409530 CDC42EP1Q00587 391 aa16.98■□□□□ 0.31
SHANK2-204ENST00000409530 PPP2R3AQ06190 1150 aa16.98■□□□□ 0.31
SHANK2-204ENST00000409530 TWF2Q6IBS0 349 aaKnown RBP16.98■□□□□ 0.31
SHANK2-204ENST00000409530 NOTUMQ6P988 496 aa16.98■□□□□ 0.31
SHANK2-204ENST00000409530 GBP6Q6ZN66 633 aa16.98■□□□□ 0.31
SHANK2-204ENST00000409530 KCNN1Q92952 543 aa16.98■□□□□ 0.31
SHANK2-204ENST00000409530 MFSD14AQ96MC6 490 aa16.98■□□□□ 0.31
SHANK2-204ENST00000409530 TMEM117Q9H0C3 514 aa16.98■□□□□ 0.31
SHANK2-204ENST00000409530 NXF3Q9H4D5 531 aaKnown RBP16.98■□□□□ 0.31
SHANK2-204ENST00000409530 ANK1P16157 1881 aa16.98■□□□□ 0.31
SHANK2-204ENST00000409530 MFAP3LO75121 409 aa16.97■□□□□ 0.31
SHANK2-204ENST00000409530 STAG3L1P0CL83 205 aa16.97■□□□□ 0.31
SHANK2-204ENST00000409530 CD52P31358 61 aa16.97■□□□□ 0.31
SHANK2-204ENST00000409530 GSDMDP57764 484 aa16.97■□□□□ 0.31
SHANK2-204ENST00000409530 POLR2FP61218 127 aaKnown RBP16.97■□□□□ 0.31
SHANK2-204ENST00000409530 PTK7Q13308 1070 aa16.97■□□□□ 0.31
SHANK2-204ENST00000409530 ENOX2Q16206 610 aaKnown RBP16.97■□□□□ 0.31
SHANK2-204ENST00000409530 CACNA2D4Q7Z3S7 1137 aa16.97■□□□□ 0.31
SHANK2-204ENST00000409530 LRRC8AQ8IWT6 810 aa16.97■□□□□ 0.31
SHANK2-204ENST00000409530 TC2NQ8N9U0 490 aa16.97■□□□□ 0.31
SHANK2-204ENST00000409530 CCDC150Q8NCX0 1101 aa16.97■□□□□ 0.31
SHANK2-204ENST00000409530 KIAA1586Q9HCI6 787 aa16.97■□□□□ 0.31
SHANK2-204ENST00000409530 A0A1B0GUA9 196 aa16.97■□□□□ 0.31
SHANK2-204ENST00000409530 SGPL1O95470 568 aa16.97■□□□□ 0.31
SHANK2-204ENST00000409530 KRT9P35527 623 aa16.97■□□□□ 0.31
SHANK2-204ENST00000409530 TFAMQ00059 246 aaKnown RBP16.97■□□□□ 0.31
SHANK2-204ENST00000409530 RAPGEF1Q13905 1077 aa16.97■□□□□ 0.31
SHANK2-204ENST00000409530 SLC27A1Q6PCB7 646 aa16.97■□□□□ 0.31
SHANK2-204ENST00000409530 BRSK2Q8IWQ3 736 aa16.97■□□□□ 0.31
SHANK2-204ENST00000409530 MTMR12Q9C0I1 747 aa16.97■□□□□ 0.31
SHANK2-204ENST00000409530 INTS2Q9H0H0 1204 aaKnown RBP16.97■□□□□ 0.31
SHANK2-204ENST00000409530 AGO3Q9H9G7 860 aaKnown RBP16.97■□□□□ 0.31
SHANK2-204ENST00000409530 RPF1Q9H9Y2 349 aaKnown RBP16.97■□□□□ 0.31
SHANK2-204ENST00000409530 SNTG2Q9NY99 539 aa16.97■□□□□ 0.31
SHANK2-204ENST00000409530 CPSF3Q9UKF6 684 aaKnown RBP16.97■□□□□ 0.31
SHANK2-204ENST00000409530 ST3GAL5Q9UNP4 418 aa16.97■□□□□ 0.31
SHANK2-204ENST00000409530 KIAA0100Q14667 2235 aaKnown RBP16.97■□□□□ 0.31
SHANK2-204ENST00000409530 CITO14578 2027 aa16.96■□□□□ 0.31
SHANK2-204ENST00000409530 KIAA0391O15091 583 aaKnown RBP16.96■□□□□ 0.31
SHANK2-204ENST00000409530 CKBP12277 381 aa16.96■□□□□ 0.31
SHANK2-204ENST00000409530 AKAP5P24588 427 aa16.96■□□□□ 0.31
SHANK2-204ENST00000409530 PON1P27169 355 aa16.96■□□□□ 0.31
SHANK2-204ENST00000409530 MGAT3Q09327 533 aa16.96■□□□□ 0.31
SHANK2-204ENST00000409530 PSMD6Q15008 389 aa16.96■□□□□ 0.31
SHANK2-204ENST00000409530 TRIM65Q6PJ69 517 aa16.96■□□□□ 0.31
SHANK2-204ENST00000409530 USP37Q86T82 979 aa16.96■□□□□ 0.31
SHANK2-204ENST00000409530 OR5B17Q8NGF7 314 aa16.96■□□□□ 0.31
SHANK2-204ENST00000409530 PI4K2AQ9BTU6 479 aa16.96■□□□□ 0.31
SHANK2-204ENST00000409530 AJAP1Q9UKB5 411 aaPredicted RBP16.96■□□□□ 0.31
SHANK2-204ENST00000409530 FHOD1Q9Y613 1164 aa16.96■□□□□ 0.31
SHANK2-204ENST00000409530 MAPK13O15264 365 aa16.96■□□□□ 0.3
SHANK2-204ENST00000409530 PNMA6AP0CW24 399 aaPredicted RBP16.96■□□□□ 0.3
SHANK2-204ENST00000409530 MCF2P10911 925 aa16.96■□□□□ 0.3
SHANK2-204ENST00000409530 ARID5AQ03989 594 aa16.96■□□□□ 0.3
SHANK2-204ENST00000409530 PAK2Q13177 524 aa16.96■□□□□ 0.3
SHANK2-204ENST00000409530 SCARA3Q6AZY7 606 aa16.96■□□□□ 0.3
SHANK2-204ENST00000409530 C17orf53Q8N3J3 647 aaPredicted RBP16.96■□□□□ 0.3
SHANK2-204ENST00000409530 TAS1R2Q8TE23 839 aa16.96■□□□□ 0.3
SHANK2-204ENST00000409530 TMEM174Q8WUU8 243 aa16.96■□□□□ 0.3
SHANK2-204ENST00000409530 ZNF516Q92618 1163 aa16.96■□□□□ 0.3
SHANK2-204ENST00000409530 CXCL16Q9H2A7 254 aa16.96■□□□□ 0.3
SHANK2-204ENST00000409530 KLK14Q9P0G3 267 aa16.96■□□□□ 0.3
SHANK2-204ENST00000409530 LUC7L2Q9Y383 392 aaKnown RBP16.96■□□□□ 0.3
SHANK2-204ENST00000409530 TRIP11Q15643 1979 aa16.95■□□□□ 0.3
SHANK2-204ENST00000409530 PIK3CAP42336 1068 aa16.95■□□□□ 0.3
SHANK2-204ENST00000409530 PTPN11Q06124 597 aaPredicted RBP16.95■□□□□ 0.3
SHANK2-204ENST00000409530 TRIM14Q14142 442 aa16.95■□□□□ 0.3
SHANK2-204ENST00000409530 GLRA4Q5JXX5 417 aa16.95■□□□□ 0.3
SHANK2-204ENST00000409530 SV2AQ7L0J3 742 aa16.95■□□□□ 0.3
SHANK2-204ENST00000409530 RRAGAQ7L523 313 aa16.95■□□□□ 0.3
SHANK2-204ENST00000409530 RNF169Q8NCN4 708 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms