RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 ZBTB33Q86T24 672 aa16.15■□□□□ 0.18
SUMO1-207ENST00000409498 TMEM192Q8IY95 271 aa16.15■□□□□ 0.18
SUMO1-207ENST00000409498 CEP120Q8N960 986 aa16.15■□□□□ 0.18
SUMO1-207ENST00000409498 URGCPQ8TCY9 931 aa16.15■□□□□ 0.18
SUMO1-207ENST00000409498 P2RX5Q93086 422 aa16.15■□□□□ 0.18
SUMO1-207ENST00000409498 GAD1Q99259 594 aa16.15■□□□□ 0.18
SUMO1-207ENST00000409498 CCDC94Q9BW85 323 aaPredicted RBP16.15■□□□□ 0.18
SUMO1-207ENST00000409498 GTPBP4Q9BZE4 634 aaKnown RBP16.15■□□□□ 0.18
SUMO1-207ENST00000409498 RMND1Q9NWS8 449 aa16.15■□□□□ 0.18
SUMO1-207ENST00000409498 MIOSQ9NXC5 875 aa16.15■□□□□ 0.18
SUMO1-207ENST00000409498 CGNQ9P2M7 1197 aaKnown RBP16.15■□□□□ 0.18
SUMO1-207ENST00000409498 PCDHA5Q9Y5H7 936 aa16.15■□□□□ 0.18
SUMO1-207ENST00000409498 TGFB1I1O43294 461 aa16.14■□□□□ 0.17
SUMO1-207ENST00000409498 RECQL4O94761 1208 aa16.14■□□□□ 0.17
SUMO1-207ENST00000409498 SMC2O95347 1197 aa16.14■□□□□ 0.17
SUMO1-207ENST00000409498 CLTAP09496 248 aa16.14■□□□□ 0.17
SUMO1-207ENST00000409498 IBSPP21815 317 aaPredicted RBP16.14■□□□□ 0.17
SUMO1-207ENST00000409498 MLH1P40692 756 aa16.14■□□□□ 0.17
SUMO1-207ENST00000409498 AFF1P51825 1210 aaKnown RBP16.14■□□□□ 0.17
SUMO1-207ENST00000409498 DSC1Q08554 894 aa16.14■□□□□ 0.17
SUMO1-207ENST00000409498 EPC2Q52LR7 807 aa16.14■□□□□ 0.17
SUMO1-207ENST00000409498 C12orf56Q8IXR9 622 aa16.14■□□□□ 0.17
SUMO1-207ENST00000409498 ACAP3Q96P50 834 aa16.14■□□□□ 0.17
SUMO1-207ENST00000409498 C17orf80Q9BSJ5 609 aa16.14■□□□□ 0.17
SUMO1-207ENST00000409498 GBP3Q9H0R5 595 aa16.14■□□□□ 0.17
SUMO1-207ENST00000409498 NRDE2Q9H7Z3 1164 aa16.14■□□□□ 0.17
SUMO1-207ENST00000409498 PLEKHA5Q9HAU0 1116 aa16.14■□□□□ 0.17
SUMO1-207ENST00000409498 ANKFY1Q9P2R3 1169 aa16.14■□□□□ 0.17
SUMO1-207ENST00000409498 PARP2Q9UGN5 583 aa16.14■□□□□ 0.17
SUMO1-207ENST00000409498 CPSF3Q9UKF6 684 aaKnown RBP16.14■□□□□ 0.17
SUMO1-207ENST00000409498 CITO14578 2027 aa16.13■□□□□ 0.17
SUMO1-207ENST00000409498 TISP43B9A030 160 aa16.13■□□□□ 0.17
SUMO1-207ENST00000409498 PTGESO14684 152 aa16.13■□□□□ 0.17
SUMO1-207ENST00000409498 MEFVO15553 781 aaPredicted RBP16.13■□□□□ 0.17
SUMO1-207ENST00000409498 KIF20AO95235 890 aa16.13■□□□□ 0.17
SUMO1-207ENST00000409498 LDHAP00338 332 aaKnown RBP16.13■□□□□ 0.17
SUMO1-207ENST00000409498 LAG3P18627 525 aa16.13■□□□□ 0.17
SUMO1-207ENST00000409498 POU3F3P20264 500 aaPredicted RBP16.13■□□□□ 0.17
SUMO1-207ENST00000409498 GRIK3Q13003 919 aa16.13■□□□□ 0.17
SUMO1-207ENST00000409498 NAB2Q15742 525 aa16.13■□□□□ 0.17
SUMO1-207ENST00000409498 KNOP1Q1ED39 458 aaKnown RBP16.13■□□□□ 0.17
SUMO1-207ENST00000409498 SLC10A6Q3KNW5 377 aa16.13■□□□□ 0.17
SUMO1-207ENST00000409498 SPRED2Q7Z698 418 aa16.13■□□□□ 0.17
SUMO1-207ENST00000409498 THNSL1Q8IYQ7 743 aa16.13■□□□□ 0.17
SUMO1-207ENST00000409498 SYCP3Q8IZU3 236 aa16.13■□□□□ 0.17
SUMO1-207ENST00000409498 GUF1Q8N442 669 aaKnown RBP16.13■□□□□ 0.17
SUMO1-207ENST00000409498 SMARCE1Q969G3 411 aa16.13■□□□□ 0.17
SUMO1-207ENST00000409498 ZFP42Q96MM3 310 aa16.13■□□□□ 0.17
SUMO1-207ENST00000409498 TSPAN18Q96SJ8 248 aa16.13■□□□□ 0.17
SUMO1-207ENST00000409498 TMEM175Q9BSA9 504 aa16.13■□□□□ 0.17
SUMO1-207ENST00000409498 MSTO1Q9BUK6 570 aa16.13■□□□□ 0.17
SUMO1-207ENST00000409498 APOL6Q9BWW8 343 aa16.13■□□□□ 0.17
SUMO1-207ENST00000409498 IKZF4Q9H2S9 585 aa16.13■□□□□ 0.17
SUMO1-207ENST00000409498 AAASQ9NRG9 546 aa16.13■□□□□ 0.17
SUMO1-207ENST00000409498 TOPORSQ9NS56 1045 aaPredicted RBP16.13■□□□□ 0.17
SUMO1-207ENST00000409498 CNTN3Q9P232 1028 aa16.13■□□□□ 0.17
SUMO1-207ENST00000409498 AGO2Q9UKV8 859 aaKnown RBP16.13■□□□□ 0.17
SUMO1-207ENST00000409498 LAMA2P24043 3122 aaKnown RBP16.13■□□□□ 0.17
SUMO1-207ENST00000409498 TDRD15B5MCY1 1934 aaKnown RBP16.13■□□□□ 0.17
SUMO1-207ENST00000409498 TTC26A0AVF1 554 aa16.12■□□□□ 0.17
SUMO1-207ENST00000409498 H3BNC9 293 aa16.12■□□□□ 0.17
SUMO1-207ENST00000409498 DDHD2O94830 711 aa16.12■□□□□ 0.17
SUMO1-207ENST00000409498 KCNE1P15382 129 aa16.12■□□□□ 0.17
SUMO1-207ENST00000409498 SCNN1GP51170 649 aa16.12■□□□□ 0.17
SUMO1-207ENST00000409498 YARSP54577 528 aaKnown RBP16.12■□□□□ 0.17
SUMO1-207ENST00000409498 GRIN2CQ14957 1233 aa16.12■□□□□ 0.17
SUMO1-207ENST00000409498 ZNF658Q5TYW1 1059 aaPredicted RBP16.12■□□□□ 0.17
SUMO1-207ENST00000409498 CRELD2Q6UXH1 353 aaPredicted RBP16.12■□□□□ 0.17
SUMO1-207ENST00000409498 ZNF280BQ86YH2 543 aa16.12■□□□□ 0.17
SUMO1-207ENST00000409498 CD302Q8IX05 232 aa16.12■□□□□ 0.17
SUMO1-207ENST00000409498 COLGALT2Q8IYK4 626 aa16.12■□□□□ 0.17
SUMO1-207ENST00000409498 COLGALT1Q8NBJ5 622 aa16.12■□□□□ 0.17
SUMO1-207ENST00000409498 POMGNT1Q8WZA1 660 aa16.12■□□□□ 0.17
SUMO1-207ENST00000409498 SNX27Q96L92 541 aa16.12■□□□□ 0.17
SUMO1-207ENST00000409498 FBXL18Q96ME1 805 aa16.12■□□□□ 0.17
SUMO1-207ENST00000409498 KCTD10Q9H3F6 313 aa16.12■□□□□ 0.17
SUMO1-207ENST00000409498 MTMR10Q9NXD2 777 aa16.12■□□□□ 0.17
SUMO1-207ENST00000409498 KLK14Q9P0G3 267 aa16.12■□□□□ 0.17
SUMO1-207ENST00000409498 INPP5FQ9Y2H2 1132 aa16.12■□□□□ 0.17
SUMO1-207ENST00000409498 GDAQ9Y2T3 454 aa16.12■□□□□ 0.17
SUMO1-207ENST00000409498 TRIP11Q15643 1979 aa16.12■□□□□ 0.17
SUMO1-207ENST00000409498 PDXKO00764 312 aa16.11■□□□□ 0.17
SUMO1-207ENST00000409498 LPXNO60711 386 aa16.11■□□□□ 0.17
SUMO1-207ENST00000409498 POMCP01189 267 aa16.11■□□□□ 0.17
SUMO1-207ENST00000409498 THP07101 528 aa16.11■□□□□ 0.17
SUMO1-207ENST00000409498 GALTP07902 379 aa16.11■□□□□ 0.17
SUMO1-207ENST00000409498 TNFSF9P41273 254 aa16.11■□□□□ 0.17
SUMO1-207ENST00000409498 MATR3P43243 847 aaKnown RBP eCLIP16.11■□□□□ 0.17
SUMO1-207ENST00000409498 PLCB3Q01970 1234 aa16.11■□□□□ 0.17
SUMO1-207ENST00000409498 MYBPC2Q14324 1141 aa16.11■□□□□ 0.17
SUMO1-207ENST00000409498 NFIL3Q16649 462 aa16.11■□□□□ 0.17
SUMO1-207ENST00000409498 KCNT2Q6UVM3 1135 aa16.11■□□□□ 0.17
SUMO1-207ENST00000409498 GOLGA5Q8TBA6 731 aa16.11■□□□□ 0.17
SUMO1-207ENST00000409498 GPT2Q8TD30 523 aa16.11■□□□□ 0.17
SUMO1-207ENST00000409498 PPP1R10Q96QC0 940 aaKnown RBP16.11■□□□□ 0.17
SUMO1-207ENST00000409498 RPS6KC1Q96S38 1066 aa16.11■□□□□ 0.17
SUMO1-207ENST00000409498 CBWD1Q9BRT8 395 aa16.11■□□□□ 0.17
SUMO1-207ENST00000409498 CXCL16Q9H2A7 254 aa16.11■□□□□ 0.17
SUMO1-207ENST00000409498 CLSTN2Q9H4D0 955 aa16.11■□□□□ 0.17
SUMO1-207ENST00000409498 AGPAT3Q9NRZ7 376 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms