RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 CCDC94Q9BW85 323 aaPredicted RBP21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 FGFBP2Q9BYJ0 223 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 ALG13Q9NP73 1137 aaKnown RBP21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 EXOC7Q9UPT5 735 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 NLRC5Q86WI3 1866 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 GRM6O15303 877 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 FGF18O76093 207 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 DDHD2O94830 711 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 MYBP10242 640 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 PBX3P40426 434 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 SLC39A4Q6P5W5 647 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 STXBP4Q6ZWJ1 553 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 FMR1NBQ8N0W7 255 aaPredicted RBP21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 CEP120Q8N960 986 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 TMEM87AQ8NBN3 555 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 SPPL3Q8TCT6 385 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 MRPL38Q96DV4 380 aaKnown RBP21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 FAM193BQ96PV7 902 aaPredicted RBP21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 RPS6KC1Q96S38 1066 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 GBP3Q9H0R5 595 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 LMAN2LQ9H0V9 348 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 TOPORSQ9NS56 1045 aaPredicted RBP21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 MIOSQ9NXC5 875 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 SPG21Q9NZD8 308 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 A0A0B4J269 797 aa21.7■■□□□ 1.06
PDLIM2-207ENST00000409417 B4GALT3O60512 393 aa21.7■■□□□ 1.06
PDLIM2-207ENST00000409417 HARSP12081 509 aaKnown RBP21.7■■□□□ 1.06
PDLIM2-207ENST00000409417 MATR3P43243 847 aaKnown RBP eCLIP21.7■■□□□ 1.06
PDLIM2-207ENST00000409417 YARSP54577 528 aaKnown RBP21.7■■□□□ 1.06
PDLIM2-207ENST00000409417 OSTNP61366 133 aa21.7■■□□□ 1.06
PDLIM2-207ENST00000409417 FAM160A1Q05DH4 1040 aa21.7■■□□□ 1.06
PDLIM2-207ENST00000409417 DSC1Q08554 894 aa21.7■■□□□ 1.06
PDLIM2-207ENST00000409417 KCNA1Q09470 495 aa21.7■■□□□ 1.06
PDLIM2-207ENST00000409417 GRIK3Q13003 919 aa21.7■■□□□ 1.06
PDLIM2-207ENST00000409417 SNW1Q13573 536 aaKnown RBP21.7■■□□□ 1.06
PDLIM2-207ENST00000409417 FAM26FQ5R3K3 315 aa21.7■■□□□ 1.06
PDLIM2-207ENST00000409417 ENGASEQ8NFI3 743 aa21.7■■□□□ 1.06
PDLIM2-207ENST00000409417 HPS3Q969F9 1004 aa21.7■■□□□ 1.06
PDLIM2-207ENST00000409417 CCDC34Q96HJ3 373 aa21.7■■□□□ 1.06
PDLIM2-207ENST00000409417 ACAP3Q96P50 834 aa21.7■■□□□ 1.06
PDLIM2-207ENST00000409417 HAPLN2Q9GZV7 340 aa21.7■■□□□ 1.06
PDLIM2-207ENST00000409417 DNAJB4Q9UDY4 337 aa21.7■■□□□ 1.06
PDLIM2-207ENST00000409417 STYXL1Q9Y6J8 313 aa21.7■■□□□ 1.06
PDLIM2-207ENST00000409417 SLC34A2O95436 690 aa21.69■■□□□ 1.06
PDLIM2-207ENST00000409417 GALTP07902 379 aa21.69■■□□□ 1.06
PDLIM2-207ENST00000409417 PLCB3Q01970 1234 aa21.69■■□□□ 1.06
PDLIM2-207ENST00000409417 UBE3AQ05086 875 aa21.69■■□□□ 1.06
PDLIM2-207ENST00000409417 KYAT1Q16773 422 aa21.69■■□□□ 1.06
PDLIM2-207ENST00000409417 SLFN12LQ6IEE8 588 aa21.69■■□□□ 1.06
PDLIM2-207ENST00000409417 KANK3Q6NY19 840 aa21.69■■□□□ 1.06
PDLIM2-207ENST00000409417 COLGALT2Q8IYK4 626 aa21.69■■□□□ 1.06
PDLIM2-207ENST00000409417 SLC39A11Q8N1S5 342 aa21.69■■□□□ 1.06
PDLIM2-207ENST00000409417 MAFAQ8NHW3 353 aaPredicted RBP21.69■■□□□ 1.06
PDLIM2-207ENST00000409417 TMEM175Q9BSA9 504 aa21.69■■□□□ 1.06
PDLIM2-207ENST00000409417 MYO7AQ13402 2215 aa21.69■■□□□ 1.06
PDLIM2-207ENST00000409417 ANKRD63C9JTQ0 380 aa21.68■■□□□ 1.06
PDLIM2-207ENST00000409417 PTGESO14684 152 aa21.68■■□□□ 1.06
PDLIM2-207ENST00000409417 EIF3DO15371 548 aaKnown RBP eCLIP21.68■■□□□ 1.06
PDLIM2-207ENST00000409417 KLRC4O43908 158 aa21.68■■□□□ 1.06
PDLIM2-207ENST00000409417 ALDH2P05091 517 aa21.68■■□□□ 1.06
PDLIM2-207ENST00000409417 ALKAL1Q6UXT8 129 aa21.68■■□□□ 1.06
PDLIM2-207ENST00000409417 GLIS3Q8NEA6 775 aa21.68■■□□□ 1.06
PDLIM2-207ENST00000409417 MSTO1Q9BUK6 570 aa21.68■■□□□ 1.06
PDLIM2-207ENST00000409417 TMEM206Q9H813 350 aa21.68■■□□□ 1.06
PDLIM2-207ENST00000409417 LZTS1Q9Y250 596 aa21.68■■□□□ 1.06
PDLIM2-207ENST00000409417 EYSQ5T1H1 3165 aa21.67■■□□□ 1.06
PDLIM2-207ENST00000409417 KIAA1671Q9BY89 1806 aa21.67■■□□□ 1.06
PDLIM2-207ENST00000409417 FAM189A1O60320 539 aa21.67■■□□□ 1.06
PDLIM2-207ENST00000409417 PRPF6O94906 941 aaKnown RBP21.67■■□□□ 1.06
PDLIM2-207ENST00000409417 THP07101 528 aa21.67■■□□□ 1.06
PDLIM2-207ENST00000409417 CLTAP09496 248 aa21.67■■□□□ 1.06
PDLIM2-207ENST00000409417 SLC11A1P49279 550 aa21.67■■□□□ 1.06
PDLIM2-207ENST00000409417 KRT17Q04695 432 aa21.67■■□□□ 1.06
PDLIM2-207ENST00000409417 CAMK1Q14012 370 aa21.67■■□□□ 1.06
PDLIM2-207ENST00000409417 XKR4Q5GH76 650 aa21.67■■□□□ 1.06
PDLIM2-207ENST00000409417 EPM2AIP1Q7L775 607 aaPredicted RBP21.67■■□□□ 1.06
PDLIM2-207ENST00000409417 SYCP3Q8IZU3 236 aa21.67■■□□□ 1.06
PDLIM2-207ENST00000409417 CXCL16Q9H2A7 254 aa21.67■■□□□ 1.06
PDLIM2-207ENST00000409417 EXOC1Q9NV70 894 aa21.67■■□□□ 1.06
PDLIM2-207ENST00000409417 PUF60Q9UHX1 559 aaKnown RBP21.67■■□□□ 1.06
PDLIM2-207ENST00000409417 COL4A4P53420 1690 aaPredicted RBP21.67■■□□□ 1.06
PDLIM2-207ENST00000409417 TISP43B9A030 160 aa21.66■■□□□ 1.06
PDLIM2-207ENST00000409417 NT5C1B-RDH14C9J2C7 533 aa21.66■■□□□ 1.06
PDLIM2-207ENST00000409417 OGTO15294 1046 aa21.66■■□□□ 1.06
PDLIM2-207ENST00000409417 GADD45BO75293 160 aaPredicted RBP21.66■■□□□ 1.06
PDLIM2-207ENST00000409417 NR1I2O75469 434 aa21.66■■□□□ 1.06
PDLIM2-207ENST00000409417 DNAJB1P25685 340 aa21.66■■□□□ 1.06
PDLIM2-207ENST00000409417 ADSSP30520 456 aa21.66■■□□□ 1.06
PDLIM2-207ENST00000409417 DPYDQ12882 1025 aa21.66■■□□□ 1.06
PDLIM2-207ENST00000409417 POSTNQ15063 836 aa21.66■■□□□ 1.06
PDLIM2-207ENST00000409417 CLEC17AQ6ZS10 378 aa21.66■■□□□ 1.06
PDLIM2-207ENST00000409417 POF1BQ8WVV4 589 aa21.66■■□□□ 1.06
PDLIM2-207ENST00000409417 IGSF21Q96ID5 467 aa21.66■■□□□ 1.06
PDLIM2-207ENST00000409417 SNX27Q96L92 541 aa21.66■■□□□ 1.06
PDLIM2-207ENST00000409417 IKZF4Q9H2S9 585 aa21.66■■□□□ 1.06
PDLIM2-207ENST00000409417 FAN1Q9Y2M0 1017 aa21.66■■□□□ 1.06
PDLIM2-207ENST00000409417 PRUNE2Q8WUY3 3088 aa21.66■■□□□ 1.06
PDLIM2-207ENST00000409417 SMIM28A0A1B0GU29 152 aa21.65■■□□□ 1.06
PDLIM2-207ENST00000409417 RPN1P04843 607 aaKnown RBP21.65■■□□□ 1.06
PDLIM2-207ENST00000409417 PSMD2Q13200 908 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms