RNA–Protein interactions for RNA: ENST00000409116.5

SNRNP27-202, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 5 BASIC

Gene SNRNP27, Length 1,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-202ENST00000409116 HACE1Q8IYU2 909 aa16.51■□□□□ 0.23
SNRNP27-202ENST00000409116 GOLGA5Q8TBA6 731 aa16.51■□□□□ 0.23
SNRNP27-202ENST00000409116 ZFP42Q96MM3 310 aa16.51■□□□□ 0.23
SNRNP27-202ENST00000409116 FAM213AQ9BRX8 229 aa16.51■□□□□ 0.23
SNRNP27-202ENST00000409116 CCDC94Q9BW85 323 aaPredicted RBP16.51■□□□□ 0.23
SNRNP27-202ENST00000409116 CXCL16Q9H2A7 254 aa16.51■□□□□ 0.23
SNRNP27-202ENST00000409116 RSAD1Q9HA92 442 aa16.51■□□□□ 0.23
SNRNP27-202ENST00000409116 HSPBP1Q9NZL4 362 aa16.51■□□□□ 0.23
SNRNP27-202ENST00000409116 INPP5FQ9Y2H2 1132 aa16.51■□□□□ 0.23
SNRNP27-202ENST00000409116 TRIM49BA6NDI0 452 aa16.5■□□□□ 0.23
SNRNP27-202ENST00000409116 PSMA7O14818 248 aa16.5■□□□□ 0.23
SNRNP27-202ENST00000409116 MEFVO15553 781 aaPredicted RBP16.5■□□□□ 0.23
SNRNP27-202ENST00000409116 TLL1O43897 1013 aa16.5■□□□□ 0.23
SNRNP27-202ENST00000409116 DGKIO75912 1065 aa16.5■□□□□ 0.23
SNRNP27-202ENST00000409116 MYOGP15173 224 aa16.5■□□□□ 0.23
SNRNP27-202ENST00000409116 SASS6Q6UVJ0 657 aa16.5■□□□□ 0.23
SNRNP27-202ENST00000409116 GLB1LQ6UWU2 654 aa16.5■□□□□ 0.23
SNRNP27-202ENST00000409116 NELFBQ8WX92 580 aa16.5■□□□□ 0.23
SNRNP27-202ENST00000409116 P2RX5Q93086 422 aa16.5■□□□□ 0.23
SNRNP27-202ENST00000409116 YME1L1Q96TA2 773 aa16.5■□□□□ 0.23
SNRNP27-202ENST00000409116 GAD1Q99259 594 aa16.5■□□□□ 0.23
SNRNP27-202ENST00000409116 CGNQ9P2M7 1197 aaKnown RBP16.5■□□□□ 0.23
SNRNP27-202ENST00000409116 TRIOBPQ9H2D6 2365 aa16.5■□□□□ 0.23
SNRNP27-202ENST00000409116 ARL5CA6NH57 179 aa16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 TBKBP1A7MCY6 615 aa16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 CALUO43852 315 aaPredicted RBP16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 OFD1O75665 1012 aa16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 NR3C1P04150 777 aa16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 CLTAP09496 248 aa16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 CXCL8P10145 99 aa16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 CCNE1P24864 410 aa16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 STX17P56962 302 aa16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 SNRPFP62306 86 aaKnown RBP16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 HTRA4P83105 476 aaPredicted RBP16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 ENOX2Q16206 610 aaKnown RBP16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 ANKRD40Q6AI12 368 aa16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 CENPPQ6IPU0 288 aa16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 CRELD2Q6UXH1 353 aaPredicted RBP16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 C12orf56Q8IXR9 622 aa16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 ABI1Q8IZP0 508 aa16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 MLKLQ8NB16 471 aa16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 EEF2KMTQ96G04 330 aa16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 DHTKD1Q96HY7 919 aaPredicted RBP16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 ACAP3Q96P50 834 aa16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 CASD1Q96PB1 797 aa16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 RAD9AQ99638 391 aa16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 TMEM117Q9H0C3 514 aa16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 RC3H2Q9HBD1 1191 aaKnown RBP16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 HCSTQ9UBK5 93 aa16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 CPSF3Q9UKF6 684 aaKnown RBP16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 TRAF3IP3Q9Y228 551 aa16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 GIT1Q9Y2X7 761 aa16.49■□□□□ 0.23
SNRNP27-202ENST00000409116 SYCE3A1L190 88 aa16.48■□□□□ 0.23
SNRNP27-202ENST00000409116 LCHNA4D1U4 455 aa16.48■□□□□ 0.23
SNRNP27-202ENST00000409116 TULP1O00294 542 aaPredicted RBP16.48■□□□□ 0.23
SNRNP27-202ENST00000409116 HOXA2O43364 376 aa16.48■□□□□ 0.23
SNRNP27-202ENST00000409116 EXTL3O43909 919 aa16.48■□□□□ 0.23
SNRNP27-202ENST00000409116 PBX2P40425 430 aa16.48■□□□□ 0.23
SNRNP27-202ENST00000409116 PPP1R2P41236 205 aa16.48■□□□□ 0.23
SNRNP27-202ENST00000409116 SCNN1GP51170 649 aa16.48■□□□□ 0.23
SNRNP27-202ENST00000409116 YARSP54577 528 aaKnown RBP16.48■□□□□ 0.23
SNRNP27-202ENST00000409116 TYRO3Q06418 890 aa16.48■□□□□ 0.23
SNRNP27-202ENST00000409116 PAK1Q13153 545 aa16.48■□□□□ 0.23
SNRNP27-202ENST00000409116 SLC10A6Q3KNW5 377 aa16.48■□□□□ 0.23
SNRNP27-202ENST00000409116 ZSCAN23Q3MJ62 389 aa16.48■□□□□ 0.23
SNRNP27-202ENST00000409116 NOMO2Q5JPE7 1267 aa16.48■□□□□ 0.23
SNRNP27-202ENST00000409116 CBWD2Q8IUF1 395 aa16.48■□□□□ 0.23
SNRNP27-202ENST00000409116 RDH13Q8NBN7 331 aa16.48■□□□□ 0.23
SNRNP27-202ENST00000409116 ZNF689Q96CS4 500 aaPredicted RBP16.48■□□□□ 0.23
SNRNP27-202ENST00000409116 SNX27Q96L92 541 aa16.48■□□□□ 0.23
SNRNP27-202ENST00000409116 RPF1Q9H9Y2 349 aaKnown RBP16.48■□□□□ 0.23
SNRNP27-202ENST00000409116 UBN1Q9NPG3 1134 aa16.48■□□□□ 0.23
SNRNP27-202ENST00000409116 DMAC2Q9NW81 257 aa16.48■□□□□ 0.23
SNRNP27-202ENST00000409116 PLAGL2Q9UPG8 496 aa16.48■□□□□ 0.23
SNRNP27-202ENST00000409116 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.47■□□□□ 0.23
SNRNP27-202ENST00000409116 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.47■□□□□ 0.23
SNRNP27-202ENST00000409116 A0A1W2PPC1 479 aa16.47■□□□□ 0.23
SNRNP27-202ENST00000409116 EXOC3O60645 756 aa16.47■□□□□ 0.23
SNRNP27-202ENST00000409116 POMCP01189 267 aa16.47■□□□□ 0.23
SNRNP27-202ENST00000409116 NR2F2P24468 414 aa16.47■□□□□ 0.23
SNRNP27-202ENST00000409116 CASP4P49662 377 aa16.47■□□□□ 0.23
SNRNP27-202ENST00000409116 STX1AQ16623 288 aa16.47■□□□□ 0.23
SNRNP27-202ENST00000409116 KYAT1Q16773 422 aa16.47■□□□□ 0.23
SNRNP27-202ENST00000409116 GLRA4Q5JXX5 417 aa16.47■□□□□ 0.23
SNRNP27-202ENST00000409116 TTI2Q6NXR4 508 aa16.47■□□□□ 0.23
SNRNP27-202ENST00000409116 SLC9A9Q8IVB4 645 aa16.47■□□□□ 0.23
SNRNP27-202ENST00000409116 GPD1LQ8N335 351 aa16.47■□□□□ 0.23
SNRNP27-202ENST00000409116 XXYLT1Q8NBI6 393 aa16.47■□□□□ 0.23
SNRNP27-202ENST00000409116 FAM212AQ96EL1 285 aa16.47■□□□□ 0.23
SNRNP27-202ENST00000409116 TSG101Q99816 390 aa16.47■□□□□ 0.23
SNRNP27-202ENST00000409116 TOPORSQ9NS56 1045 aaPredicted RBP16.47■□□□□ 0.23
SNRNP27-202ENST00000409116 MIOSQ9NXC5 875 aa16.47■□□□□ 0.23
SNRNP27-202ENST00000409116 YBX2Q9Y2T7 364 aaKnown RBP16.47■□□□□ 0.23
SNRNP27-202ENST00000409116 INSL6Q9Y581 213 aa16.47■□□□□ 0.23
SNRNP27-202ENST00000409116 TRANK1O15050 2925 aa16.47■□□□□ 0.23
SNRNP27-202ENST00000409116 LACTBL1A8MY62 500 aa16.46■□□□□ 0.23
SNRNP27-202ENST00000409116 PTGESO14684 152 aa16.46■□□□□ 0.23
SNRNP27-202ENST00000409116 KIAA0391O15091 583 aaKnown RBP16.46■□□□□ 0.23
SNRNP27-202ENST00000409116 ARHGEF15O94989 841 aa16.46■□□□□ 0.23
SNRNP27-202ENST00000409116 LDHAP00338 332 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms