RNA–Protein interactions for RNA: ENST00000409057.5

PBRM1-205, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-205ENST00000409057 CEP19Q96LK0 163 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 PCSK1NQ9UHG2 260 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 SNX5Q9Y5X3 404 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 OVOS2A0A0G2JMS6 1433 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 LMTK2Q8IWU2 1503 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 SCP2P22307 547 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 SDC4P31431 198 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 PRPF38AQ8NAV1 312 aaKnown RBP11.33□□□□□ -0.6
PBRM1-205ENST00000409057 USP38Q8NB14 1042 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 ALKBH8Q96BT7 664 aaKnown RBP11.33□□□□□ -0.6
PBRM1-205ENST00000409057 ZBTB18Q99592 522 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 EPB41L4AQ9HCS5 686 aaPredicted RBP11.33□□□□□ -0.6
PBRM1-205ENST00000409057 SLC40A1Q9NP59 571 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 GTSE1Q9NYZ3 720 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 ADA2Q9NZK5 511 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 FBXO40Q9UH90 709 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 PPME1Q9Y570 386 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 FAM47DPA6NHR8 397 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 EYA4O95677 639 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 PSMC1P62191 440 aaKnown RBP11.33□□□□□ -0.6
PBRM1-205ENST00000409057 TEX9Q8N6V9 391 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 CCNYL1Q8N7R7 359 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 FOXP3Q9BZS1 431 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 RANBP17Q9H2T7 1088 aaKnown RBP11.33□□□□□ -0.6
PBRM1-205ENST00000409057 PPCSQ9HAB8 311 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 DLC1Q96QB1 1528 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 ROR1Q01973 937 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 BIRC2Q13490 618 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 NKX1-1Q15270 411 aaPredicted RBP11.33□□□□□ -0.6
PBRM1-205ENST00000409057 SNRNP48Q6IEG0 339 aaKnown RBP11.33□□□□□ -0.6
PBRM1-205ENST00000409057 ABI1Q8IZP0 508 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 OR6B3Q8NGW1 331 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 ANKS1AQ92625 1134 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 GFM2Q969S9 779 aaKnown RBP11.33□□□□□ -0.6
PBRM1-205ENST00000409057 RBM15Q96T37 977 aaKnown RBP eCLIP11.33□□□□□ -0.6
PBRM1-205ENST00000409057 SENP2Q9HC62 589 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 PARVAQ9NVD7 372 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 MTMR4Q9NYA4 1195 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 BFARQ9NZS9 450 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 L1RE1Q9UN81 338 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 IQSEC2Q5JU85 1478 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 PDS5AQ29RF7 1337 aaKnown RBP11.32□□□□□ -0.6
PBRM1-205ENST00000409057 ARHGDIAP52565 204 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 PSMC5P62195 406 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 TAP1Q03518 808 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 MED21Q13503 144 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 EPHA7Q15375 998 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 PNKPQ96T60 521 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 GABBR1Q9UBS5 961 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 POLR1AO95602 1720 aaPredicted RBP11.32□□□□□ -0.6
PBRM1-205ENST00000409057 TYK2P29597 1187 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 IREB2P48200 963 aaKnown RBP11.32□□□□□ -0.6
PBRM1-205ENST00000409057 ZNF543Q08ER8 600 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 TSTA3Q13630 321 aaPredicted RBP11.32□□□□□ -0.6
PBRM1-205ENST00000409057 EFTUD2Q15029 972 aaKnown RBP eCLIP11.32□□□□□ -0.6
PBRM1-205ENST00000409057 LONRF1Q17RB8 773 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 EDRF1Q3B7T1 1238 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 DNAL1Q4LDG9 190 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 CEP55Q53EZ4 464 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 DALRD3Q5D0E6 543 aaKnown RBP11.32□□□□□ -0.6
PBRM1-205ENST00000409057 HEATR6Q6AI08 1181 aaKnown RBP11.32□□□□□ -0.6
PBRM1-205ENST00000409057 CATSPER4Q7RTX7 472 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 HAUS6Q7Z4H7 955 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 LONP2Q86WA8 852 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 JAMLQ86YT9 394 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 CNPY4Q8N129 248 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 DTNBP1Q96EV8 351 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 SMARCAL1Q9NZC9 954 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 DBR1Q9UK59 544 aaKnown RBP11.32□□□□□ -0.6
PBRM1-205ENST00000409057 ARHGEF37A1IGU5 675 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 E2F6O75461 281 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 RANBP1P43487 201 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 RBM43Q6ZSC3 357 aaKnown RBP11.32□□□□□ -0.6
PBRM1-205ENST00000409057 RFX8Q6ZV50 586 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 C3orf20Q8ND61 904 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 PSPC1Q8WXF1 523 aaKnown RBP11.32□□□□□ -0.6
PBRM1-205ENST00000409057 ERP27Q96DN0 273 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 ERGIC2Q96RQ1 377 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 ERP44Q9BS26 406 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 FAM49AQ9H0Q0 323 aaPredicted RBP11.32□□□□□ -0.6
PBRM1-205ENST00000409057 APEX2Q9UBZ4 518 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 SUGT1Q9Y2Z0 365 aa11.32□□□□□ -0.6
PBRM1-205ENST00000409057 TYW5A2RUC4 315 aaKnown RBP11.31□□□□□ -0.6
PBRM1-205ENST00000409057 SYCE1LA8MT33 242 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 SPP2Q13103 211 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 ZNF772Q68DY9 489 aaPredicted RBP11.31□□□□□ -0.6
PBRM1-205ENST00000409057 RHPN2Q8IUC4 686 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 EXT2Q93063 718 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 DONSONQ9NYP3 566 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 RGL1Q9NZL6 768 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 CEP152O94986 1710 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 SLC4A1P02730 911 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 KDSRQ06136 332 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 ZNF568Q3ZCX4 644 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 KDM7AQ6ZMT4 941 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 CDKL3Q8IVW4 592 aaPredicted RBP11.31□□□□□ -0.6
PBRM1-205ENST00000409057 DTX3LQ8TDB6 740 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 RNF139Q8WU17 664 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 DNAJC9Q8WXX5 260 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 TSSK1BQ9BXA7 367 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms