RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 USP15Q9Y4E8 981 aaPredicted RBP10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 ARL5CA6NH57 179 aa10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 E9PMD0 336 aa10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 GOLGA6L22H0YM25 854 aa10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 NPTXRO95502 500 aa10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 SKIP12755 728 aa10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 SCNN1GP51170 649 aa10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 KRT17Q04695 432 aa10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 POU5F1BQ06416 359 aa10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 TFDP1Q14186 410 aa10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 CDCA2Q69YH5 1023 aaPredicted RBP10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 NOTUMQ6P988 496 aa10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 SYCE2Q6PIF2 218 aa10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 TAS1R1Q7RTX1 841 aa10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 MRPL43Q8N983 215 aaKnown RBP10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 GSTCDQ8NEC7 633 aa10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 SNX29Q8TEQ0 813 aa10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 RABGGTAQ92696 567 aa10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 PGBD4Q96DM1 585 aa10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 TMEM169Q96HH4 297 aa10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 CALR3Q96L12 384 aaKnown RBP10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 GAD1Q99259 594 aa10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 NFKBIZQ9BYH8 718 aa10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 CSRNP2Q9H175 543 aa10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 BHMT2Q9H2M3 363 aa10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 CXorf56Q9H5V9 222 aa10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 NGRNQ9NPE2 291 aaKnown RBP10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 MARCH5Q9NX47 278 aa10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 KLK14Q9P0G3 267 aa10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 PUF60Q9UHX1 559 aaKnown RBP10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 HCFC2Q9Y5Z7 792 aa10.66□□□□□ -0.7
NIF3L1-202ENST00000409020 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.65□□□□□ -0.7
NIF3L1-202ENST00000409020 ARHGEF35A5YM69 484 aa10.65□□□□□ -0.7
NIF3L1-202ENST00000409020 PI4K2BG5E9Z4 385 aa10.65□□□□□ -0.7
NIF3L1-202ENST00000409020 CLASP2O75122 1294 aaKnown RBP10.65□□□□□ -0.7
NIF3L1-202ENST00000409020 COQ9O75208 318 aa10.65□□□□□ -0.7
NIF3L1-202ENST00000409020 SSBP05455 408 aaKnown RBP eCLIP10.65□□□□□ -0.7
NIF3L1-202ENST00000409020 ITGA4P13612 1032 aa10.65□□□□□ -0.7
NIF3L1-202ENST00000409020 CYP11B2P19099 503 aa10.65□□□□□ -0.7
NIF3L1-202ENST00000409020 COL9A1P20849 921 aa10.65□□□□□ -0.7
NIF3L1-202ENST00000409020 CASQ1P31415 396 aa10.65□□□□□ -0.7
NIF3L1-202ENST00000409020 NASPP49321 788 aaPredicted RBP10.65□□□□□ -0.7
NIF3L1-202ENST00000409020 SMC1AQ14683 1233 aaKnown RBP10.65□□□□□ -0.7
NIF3L1-202ENST00000409020 ZC3H12AQ5D1E8 599 aaKnown RBP10.65□□□□□ -0.7
NIF3L1-202ENST00000409020 MCPH1Q8NEM0 835 aa10.65□□□□□ -0.7
NIF3L1-202ENST00000409020 ERMNQ8TAM6 284 aa10.65□□□□□ -0.7
NIF3L1-202ENST00000409020 PDLIM2Q96JY6 352 aa10.65□□□□□ -0.7
NIF3L1-202ENST00000409020 S1PR5Q9H228 398 aa10.65□□□□□ -0.7
NIF3L1-202ENST00000409020 FZD8Q9H461 694 aa10.65□□□□□ -0.7
NIF3L1-202ENST00000409020 PRG3Q9Y2Y8 225 aaPredicted RBP10.65□□□□□ -0.7
NIF3L1-202ENST00000409020 MORC2Q9Y6X9 1032 aaPredicted RBP10.65□□□□□ -0.7
NIF3L1-202ENST00000409020 CNTNAP2Q9UHC6 1331 aa10.64□□□□□ -0.71
NIF3L1-202ENST00000409020 A0A1B0GUA9 196 aa10.64□□□□□ -0.71
NIF3L1-202ENST00000409020 NRP1O14786 923 aa10.64□□□□□ -0.71
NIF3L1-202ENST00000409020 CXCL14O95715 111 aa10.64□□□□□ -0.71
NIF3L1-202ENST00000409020 WEE2P0C1S8 567 aa10.64□□□□□ -0.71
NIF3L1-202ENST00000409020 EPCAMP16422 314 aa10.64□□□□□ -0.71
NIF3L1-202ENST00000409020 SP100P23497 879 aaPredicted RBP10.64□□□□□ -0.71
NIF3L1-202ENST00000409020 ZRSR1Q15695 479 aaKnown RBP10.64□□□□□ -0.71
NIF3L1-202ENST00000409020 HAUS3Q68CZ6 603 aa10.64□□□□□ -0.71
NIF3L1-202ENST00000409020 ANKRD54Q6NXT1 300 aa10.64□□□□□ -0.71
NIF3L1-202ENST00000409020 COLGALT2Q8IYK4 626 aa10.64□□□□□ -0.71
NIF3L1-202ENST00000409020 DAW1Q8N136 415 aa10.64□□□□□ -0.71
NIF3L1-202ENST00000409020 GOLGA6L1Q8N7Z2 621 aa10.64□□□□□ -0.71
NIF3L1-202ENST00000409020 C12orf76Q8N812 135 aaPredicted RBP10.64□□□□□ -0.71
NIF3L1-202ENST00000409020 URGCPQ8TCY9 931 aa10.64□□□□□ -0.71
NIF3L1-202ENST00000409020 B3GALT6Q96L58 329 aa10.64□□□□□ -0.71
NIF3L1-202ENST00000409020 PLIN2Q99541 437 aa10.64□□□□□ -0.71
NIF3L1-202ENST00000409020 CDCA3Q99618 268 aaPredicted RBP10.64□□□□□ -0.71
NIF3L1-202ENST00000409020 PAAF1Q9BRP4 392 aa10.64□□□□□ -0.71
NIF3L1-202ENST00000409020 LRFN3Q9BTN0 628 aa10.64□□□□□ -0.71
NIF3L1-202ENST00000409020 RUSC1Q9BVN2 902 aa10.64□□□□□ -0.71
NIF3L1-202ENST00000409020 CCDC113Q9H0I3 377 aa10.64□□□□□ -0.71
NIF3L1-202ENST00000409020 PDZD7Q9H5P4 517 aa10.64□□□□□ -0.71
NIF3L1-202ENST00000409020 CCDC39Q9UFE4 941 aa10.64□□□□□ -0.71
NIF3L1-202ENST00000409020 MUTYHQ9UIF7 546 aa10.64□□□□□ -0.71
NIF3L1-202ENST00000409020 MUC6Q6W4X9 2439 aa10.64□□□□□ -0.71
NIF3L1-202ENST00000409020 H3BQV1 296 aa10.63□□□□□ -0.71
NIF3L1-202ENST00000409020 IPO7O95373 1038 aaKnown RBP10.63□□□□□ -0.71
NIF3L1-202ENST00000409020 IGFBP6P24592 240 aaPredicted RBP10.63□□□□□ -0.71
NIF3L1-202ENST00000409020 AXLP30530 894 aa10.63□□□□□ -0.71
NIF3L1-202ENST00000409020 OR1G1P47890 313 aa10.63□□□□□ -0.71
NIF3L1-202ENST00000409020 ATP2C1P98194 919 aaPredicted RBP10.63□□□□□ -0.71
NIF3L1-202ENST00000409020 PDIA5Q14554 519 aa10.63□□□□□ -0.71
NIF3L1-202ENST00000409020 PCBP1Q15365 356 aaKnown RBP eCLIP10.63□□□□□ -0.71
NIF3L1-202ENST00000409020 PTPN14Q15678 1187 aa10.63□□□□□ -0.71
NIF3L1-202ENST00000409020 EEF1DP3Q658K8 133 aa10.63□□□□□ -0.71
NIF3L1-202ENST00000409020 PDE12Q6L8Q7 609 aaKnown RBP10.63□□□□□ -0.71
NIF3L1-202ENST00000409020 SLC27A1Q6PCB7 646 aa10.63□□□□□ -0.71
NIF3L1-202ENST00000409020 TMEM184AQ6ZMB5 413 aa10.63□□□□□ -0.71
NIF3L1-202ENST00000409020 DTHD1Q6ZMT9 781 aa10.63□□□□□ -0.71
NIF3L1-202ENST00000409020 DDX53Q86TM3 631 aaKnown RBP10.63□□□□□ -0.71
NIF3L1-202ENST00000409020 LRRC15Q8TF66 581 aa10.63□□□□□ -0.71
NIF3L1-202ENST00000409020 SUSD6Q92537 303 aa10.63□□□□□ -0.71
NIF3L1-202ENST00000409020 CCDC51Q96ER9 411 aa10.63□□□□□ -0.71
NIF3L1-202ENST00000409020 PNMA5Q96PV4 448 aa10.63□□□□□ -0.71
NIF3L1-202ENST00000409020 TRIM6Q9C030 488 aaPredicted RBP10.63□□□□□ -0.71
NIF3L1-202ENST00000409020 CHMP5Q9NZZ3 219 aa10.63□□□□□ -0.71
NIF3L1-202ENST00000409020 PRKAG3Q9UGI9 489 aa10.63□□□□□ -0.71
NIF3L1-202ENST00000409020 SMC3Q9UQE7 1217 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms