RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 MTMR1Q13613 665 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 ALCAMQ13740 583 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 DAB2IPQ5VWQ8 1189 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 B4GALNT4Q76KP1 1039 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 FAM83AQ86UY5 434 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 SLC13A5Q86YT5 568 aaPredicted RBP10.59□□□□□ -0.71
MSH2-202ENST00000406134 FLAD1Q8NFF5 587 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 EPS8L3Q8TE67 593 aaKnown RBP10.59□□□□□ -0.71
MSH2-202ENST00000406134 SLCO2A1Q92959 643 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 PGM2Q96G03 612 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 NUP85Q9BW27 656 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 ZNF341Q9BYN7 854 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 RAB17Q9H0T7 212 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 MYPNQ86TC9 1320 aa10.59□□□□□ -0.71
MSH2-202ENST00000406134 MIF4GDA9UHW6 222 aaKnown RBP10.58□□□□□ -0.72
MSH2-202ENST00000406134 WNT10BO00744 389 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 RIPK2O43353 540 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 ITGBL1O95965 494 aaPredicted RBP10.58□□□□□ -0.72
MSH2-202ENST00000406134 EDN1P05305 212 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 COILP38432 576 aaPredicted RBP10.58□□□□□ -0.72
MSH2-202ENST00000406134 KCNJ1P48048 391 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 MXI1P50539 228 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 PLTPP55058 493 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 RPS6P62753 249 aaKnown RBP10.58□□□□□ -0.72
MSH2-202ENST00000406134 MESDQ14696 234 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 CCDC137Q6PK04 289 aaKnown RBP10.58□□□□□ -0.72
MSH2-202ENST00000406134 STXBP4Q6ZWJ1 553 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 C3orf20Q8ND61 904 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 REPS2Q8NFH8 660 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 CENPTQ96BT3 561 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 FAM129AQ9BZQ8 928 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 RAVER2Q9HCJ3 691 aaKnown RBP10.58□□□□□ -0.72
MSH2-202ENST00000406134 ZNF277Q9NRM2 450 aaPredicted RBP10.58□□□□□ -0.72
MSH2-202ENST00000406134 SEPT11Q9NVA2 429 aaKnown RBP10.58□□□□□ -0.72
MSH2-202ENST00000406134 CTTNBP2NLQ9P2B4 639 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 UMODL1Q5DID0 1318 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 MYCNP04198 464 aaPredicted RBP10.58□□□□□ -0.72
MSH2-202ENST00000406134 FGFR4P22455 802 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 CHRNA3P32297 505 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 CLDN10P78369 228 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 CDR2Q01850 454 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 CCDC13Q8IYE1 715 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 ZNF564Q8TBZ8 553 aaPredicted RBP10.58□□□□□ -0.72
MSH2-202ENST00000406134 SEC16BQ96JE7 1060 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 NTPCRQ9BSD7 190 aaKnown RBP10.58□□□□□ -0.72
MSH2-202ENST00000406134 TMEM109Q9BVC6 243 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 CENPHQ9H3R5 247 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 XPNPEP1Q9NQW7 623 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 PXMP2Q9NR77 195 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 LARSQ9P2J5 1176 aaKnown RBP10.58□□□□□ -0.72
MSH2-202ENST00000406134 TMEM110-MUSTN1A8MSY1 372 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 KRT71Q3SY84 523 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 RUFY4Q6ZNE9 571 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 FAM228AQ86W67 206 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 CCT6BQ92526 530 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 FAM107BQ9H098 131 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 LRRC19Q9H756 370 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 BPTFQ12830 3046 aa10.58□□□□□ -0.72
MSH2-202ENST00000406134 ZSWIM8A7E2V4 1837 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 EIF2AK2P19525 551 aaKnown RBP10.57□□□□□ -0.72
MSH2-202ENST00000406134 CNGA1P29973 690 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 CHKAP35790 457 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 DLGAP5Q15398 846 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 ANKRD20A8PQ5CZ79 823 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 NSMFQ6X4W1 530 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 SPATS2Q86XZ4 545 aaKnown RBP10.57□□□□□ -0.72
MSH2-202ENST00000406134 PDCD2LQ9BRP1 358 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 PI4K2AQ9BTU6 479 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 DDX23Q9BUQ8 820 aaKnown RBP10.57□□□□□ -0.72
MSH2-202ENST00000406134 WNT8AQ9H1J5 351 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 KCNG1Q9UIX4 513 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 GTF3C4Q9UKN8 822 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 FOXO6A8MYZ6 492 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 OAS1P00973 400 aaKnown RBP10.57□□□□□ -0.72
MSH2-202ENST00000406134 SNRPFP62306 86 aaKnown RBP10.57□□□□□ -0.72
MSH2-202ENST00000406134 CYP24A1Q07973 514 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 TRAF1Q13077 416 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 IFT88Q13099 833 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 KLF1Q13351 362 aaPredicted RBP10.57□□□□□ -0.72
MSH2-202ENST00000406134 AUHQ13825 339 aaKnown RBP10.57□□□□□ -0.72
MSH2-202ENST00000406134 CLEC16AQ2KHT3 1053 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 MMS22LQ6ZRQ5 1243 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 TMX4Q9H1E5 349 aaPredicted RBP10.57□□□□□ -0.72
MSH2-202ENST00000406134 CCDC134Q9H6E4 229 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 AZI2Q9H6S1 392 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 EHMT1Q9H9B1 1298 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 TMEM8AQ9HCN3 771 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 CHST7Q9NS84 486 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 CAPN7Q9Y6W3 813 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 FSCN2O14926 492 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 KRT13P13646 458 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 CHN1P15882 459 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 CREB1P16220 341 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 EIF3BP55884 814 aaKnown RBP10.57□□□□□ -0.72
MSH2-202ENST00000406134 ICE2Q659A1 982 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 SV2AQ7L0J3 742 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 XPO6Q96QU8 1125 aaKnown RBP10.57□□□□□ -0.72
MSH2-202ENST00000406134 SENP7Q9BQF6 1050 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 VEZTQ9HBM0 779 aa10.57□□□□□ -0.72
MSH2-202ENST00000406134 BCCIPQ9P287 314 aaKnown RBP eCLIP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms