RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 BCO2Q9BYV7 579 aa13.28□□□□□ -0.28
SPTLC1P3-201ENST00000403408 OSBPL6Q9BZF3 934 aa13.28□□□□□ -0.28
SPTLC1P3-201ENST00000403408 CSRNP2Q9H175 543 aa13.28□□□□□ -0.28
SPTLC1P3-201ENST00000403408 ZSCAN32Q9NX65 697 aa13.28□□□□□ -0.28
SPTLC1P3-201ENST00000403408 KLK14Q9P0G3 267 aa13.28□□□□□ -0.28
SPTLC1P3-201ENST00000403408 DPP7Q9UHL4 492 aa13.28□□□□□ -0.28
SPTLC1P3-201ENST00000403408 ADAM28Q9UKQ2 775 aa13.28□□□□□ -0.28
SPTLC1P3-201ENST00000403408 AKAP13Q12802 2813 aa13.28□□□□□ -0.28
SPTLC1P3-201ENST00000403408 DSPP15924 2871 aaKnown RBP13.27□□□□□ -0.28
SPTLC1P3-201ENST00000403408 ADRB1P08588 477 aa13.27□□□□□ -0.29
SPTLC1P3-201ENST00000403408 ARF4P18085 180 aaPredicted RBP13.27□□□□□ -0.29
SPTLC1P3-201ENST00000403408 QARSP47897 775 aaKnown RBP13.27□□□□□ -0.29
SPTLC1P3-201ENST00000403408 PTENP60484 403 aa13.27□□□□□ -0.29
SPTLC1P3-201ENST00000403408 MBTD1Q05BQ5 628 aa13.27□□□□□ -0.29
SPTLC1P3-201ENST00000403408 MTAPQ13126 283 aa13.27□□□□□ -0.29
SPTLC1P3-201ENST00000403408 EMC2Q15006 297 aa13.27□□□□□ -0.29
SPTLC1P3-201ENST00000403408 LPAL2Q16609 132 aa13.27□□□□□ -0.29
SPTLC1P3-201ENST00000403408 RSPO2Q6UXX9 243 aaPredicted RBP13.27□□□□□ -0.29
SPTLC1P3-201ENST00000403408 NPAS3Q8IXF0 933 aa13.27□□□□□ -0.29
SPTLC1P3-201ENST00000403408 BICD2Q8TD16 824 aa13.27□□□□□ -0.29
SPTLC1P3-201ENST00000403408 ATRIPQ8WXE1 791 aa13.27□□□□□ -0.29
SPTLC1P3-201ENST00000403408 ING5Q8WYH8 240 aa13.27□□□□□ -0.29
SPTLC1P3-201ENST00000403408 HAS1Q92839 578 aa13.27□□□□□ -0.29
SPTLC1P3-201ENST00000403408 KCNB2Q92953 911 aa13.27□□□□□ -0.29
SPTLC1P3-201ENST00000403408 COLEC11Q9BWP8 271 aa13.27□□□□□ -0.29
SPTLC1P3-201ENST00000403408 UBN1Q9NPG3 1134 aa13.27□□□□□ -0.29
SPTLC1P3-201ENST00000403408 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.27□□□□□ -0.29
SPTLC1P3-201ENST00000403408 RGL1Q9NZL6 768 aa13.27□□□□□ -0.29
SPTLC1P3-201ENST00000403408 DNMT3BQ9UBC3 853 aaKnown RBP13.27□□□□□ -0.29
SPTLC1P3-201ENST00000403408 COL4A2P08572 1712 aa13.27□□□□□ -0.29
SPTLC1P3-201ENST00000403408 RALGAPA1Q6GYQ0 2036 aa13.27□□□□□ -0.29
SPTLC1P3-201ENST00000403408 TTLL13PA6NNM8 815 aa13.26□□□□□ -0.29
SPTLC1P3-201ENST00000403408 KIF4AO95239 1232 aa13.26□□□□□ -0.29
SPTLC1P3-201ENST00000403408 C8AP07357 584 aa13.26□□□□□ -0.29
SPTLC1P3-201ENST00000403408 IFNAR1P17181 557 aa13.26□□□□□ -0.29
SPTLC1P3-201ENST00000403408 HOXC13P31276 330 aa13.26□□□□□ -0.29
SPTLC1P3-201ENST00000403408 PPP2R5CQ13362 524 aa13.26□□□□□ -0.29
SPTLC1P3-201ENST00000403408 TRIP11Q15643 1979 aa13.26□□□□□ -0.29
SPTLC1P3-201ENST00000403408 NAB2Q15742 525 aa13.26□□□□□ -0.29
SPTLC1P3-201ENST00000403408 ST3GAL2Q16842 350 aa13.26□□□□□ -0.29
SPTLC1P3-201ENST00000403408 SLC5A9Q2M3M2 681 aa13.26□□□□□ -0.29
SPTLC1P3-201ENST00000403408 TPRG1Q6ZUI0 275 aa13.26□□□□□ -0.29
SPTLC1P3-201ENST00000403408 IFNLR1Q8IU57 520 aaPredicted RBP13.26□□□□□ -0.29
SPTLC1P3-201ENST00000403408 CNNM3Q8NE01 707 aa13.26□□□□□ -0.29
SPTLC1P3-201ENST00000403408 SLC7A3Q8WY07 619 aa13.26□□□□□ -0.29
SPTLC1P3-201ENST00000403408 RNF26Q9BY78 433 aaPredicted RBP13.26□□□□□ -0.29
SPTLC1P3-201ENST00000403408 AGXT2Q9BYV1 514 aa13.26□□□□□ -0.29
SPTLC1P3-201ENST00000403408 KCNMB3Q9NPA1 279 aa13.26□□□□□ -0.29
SPTLC1P3-201ENST00000403408 HEBP1Q9NRV9 189 aa13.26□□□□□ -0.29
SPTLC1P3-201ENST00000403408 CDV3Q9UKY7 258 aaKnown RBP13.26□□□□□ -0.29
SPTLC1P3-201ENST00000403408 USP18Q9UMW8 372 aa13.26□□□□□ -0.29
SPTLC1P3-201ENST00000403408 GIT1Q9Y2X7 761 aa13.26□□□□□ -0.29
SPTLC1P3-201ENST00000403408 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.26□□□□□ -0.29
SPTLC1P3-201ENST00000403408 ZFP37Q9Y6Q3 630 aaPredicted RBP13.26□□□□□ -0.29
SPTLC1P3-201ENST00000403408 LAMA5O15230 3695 aa13.25□□□□□ -0.29
SPTLC1P3-201ENST00000403408 CCDC196A0A1B0GTZ2 297 aa13.25□□□□□ -0.29
SPTLC1P3-201ENST00000403408 PRR5-ARHGAP8B1AHC4 643 aa13.25□□□□□ -0.29
SPTLC1P3-201ENST00000403408 PTGESO14684 152 aa13.25□□□□□ -0.29
SPTLC1P3-201ENST00000403408 DTNBO60941 627 aa13.25□□□□□ -0.29
SPTLC1P3-201ENST00000403408 FCARP24071 287 aa13.25□□□□□ -0.29
SPTLC1P3-201ENST00000403408 NLRP5P59047 1200 aa13.25□□□□□ -0.29
SPTLC1P3-201ENST00000403408 CCT2P78371 535 aaKnown RBP13.25□□□□□ -0.29
SPTLC1P3-201ENST00000403408 IRX6P78412 446 aaPredicted RBP13.25□□□□□ -0.29
SPTLC1P3-201ENST00000403408 ARHGAP8P85298 464 aa13.25□□□□□ -0.29
SPTLC1P3-201ENST00000403408 LMNB2Q03252 620 aa13.25□□□□□ -0.29
SPTLC1P3-201ENST00000403408 SPIRE1Q08AE8 756 aa13.25□□□□□ -0.29
SPTLC1P3-201ENST00000403408 CAPSQ13938 189 aa13.25□□□□□ -0.29
SPTLC1P3-201ENST00000403408 INF2Q27J81 1249 aa13.25□□□□□ -0.29
SPTLC1P3-201ENST00000403408 ZBTB41Q5SVQ8 909 aa13.25□□□□□ -0.29
SPTLC1P3-201ENST00000403408 RNF20Q5VTR2 975 aa13.25□□□□□ -0.29
SPTLC1P3-201ENST00000403408 TANGO2Q6ICL3 276 aa13.25□□□□□ -0.29
SPTLC1P3-201ENST00000403408 ELMSAN1Q6PJG2 1045 aa13.25□□□□□ -0.29
SPTLC1P3-201ENST00000403408 CD300LGQ6UXG3 332 aa13.25□□□□□ -0.29
SPTLC1P3-201ENST00000403408 PIK3R5Q8WYR1 880 aa13.25□□□□□ -0.29
SPTLC1P3-201ENST00000403408 JPH2Q9BR39 696 aaPredicted RBP13.25□□□□□ -0.29
SPTLC1P3-201ENST00000403408 LXNQ9BS40 222 aa13.25□□□□□ -0.29
SPTLC1P3-201ENST00000403408 RTKNQ9BST9 563 aa13.25□□□□□ -0.29
SPTLC1P3-201ENST00000403408 DDX25Q9UHL0 483 aaKnown RBP13.25□□□□□ -0.29
SPTLC1P3-201ENST00000403408 PCDHA4Q9UN74 947 aa13.25□□□□□ -0.29
SPTLC1P3-201ENST00000403408 NCANO14594 1321 aa13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 CASTOR2A6NHX0 329 aa13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 GDF9O60383 454 aa13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 ERLIN2O94905 339 aa13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 NPTXRO95502 500 aa13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 P4HBP07237 508 aaKnown RBP13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 HNRNPA1P09651 372 aaKnown RBP eCLIP13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 PDIA3P30101 505 aaKnown RBP13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 AXLP30530 894 aa13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 YWHABP31946 246 aaKnown RBP13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 RFC5P40937 340 aa13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 RPS9P46781 194 aaKnown RBP13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 DMWDQ09019 674 aa13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 SPEM2Q0P670 501 aa13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 CTTNQ14247 550 aaKnown RBP13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 GAS6Q14393 721 aa13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 HSP90AA2PQ14568 343 aaPredicted RBP13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 PPM1LQ5SGD2 360 aa13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 NOTUMQ6P988 496 aa13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 MOXD1Q6UVY6 613 aa13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 MTSS1LQ765P7 747 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms