RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 FBXO41Q8TF61 875 aa19.28■□□□□ 0.68
COL18A1-204ENST00000400337 COG1Q8WTW3 980 aa19.28■□□□□ 0.68
COL18A1-204ENST00000400337 AGBL1Q96MI9 1066 aa19.28■□□□□ 0.68
COL18A1-204ENST00000400337 LMCD1Q9NZU5 365 aa19.28■□□□□ 0.68
COL18A1-204ENST00000400337 SMARCA1P28370 1054 aa19.28■□□□□ 0.68
COL18A1-204ENST00000400337 NCAPHQ15003 741 aa19.28■□□□□ 0.68
COL18A1-204ENST00000400337 TPX2Q9ULW0 747 aaKnown RBP19.28■□□□□ 0.68
COL18A1-204ENST00000400337 IQCA1LA6NCM1 817 aa19.28■□□□□ 0.68
COL18A1-204ENST00000400337 RPA1P27694 616 aa19.28■□□□□ 0.68
COL18A1-204ENST00000400337 PEX19P40855 299 aa19.28■□□□□ 0.68
COL18A1-204ENST00000400337 ARSEP51690 589 aa19.28■□□□□ 0.68
COL18A1-204ENST00000400337 KYAT1Q16773 422 aa19.28■□□□□ 0.68
COL18A1-204ENST00000400337 CDKL3Q8IVW4 592 aaPredicted RBP19.28■□□□□ 0.68
COL18A1-204ENST00000400337 GGA3Q9NZ52 723 aa19.28■□□□□ 0.68
COL18A1-204ENST00000400337 PIK3C2BO00750 1634 aa19.28■□□□□ 0.68
COL18A1-204ENST00000400337 FXR2P51116 673 aaKnown RBP eCLIP19.27■□□□□ 0.684e-7■■■■□ 23.8
COL18A1-204ENST00000400337 MXD4Q14582 209 aaPredicted RBP19.27■□□□□ 0.68
COL18A1-204ENST00000400337 KITP10721 976 aa19.27■□□□□ 0.68
COL18A1-204ENST00000400337 PPP4CP60510 307 aa19.27■□□□□ 0.68
COL18A1-204ENST00000400337 EMC2Q15006 297 aa19.27■□□□□ 0.68
COL18A1-204ENST00000400337 ATP6V1G3Q96LB4 118 aa19.27■□□□□ 0.68
COL18A1-204ENST00000400337 TARSL2A2RTX5 802 aaKnown RBP19.27■□□□□ 0.68
COL18A1-204ENST00000400337 KCNJ6P48051 423 aa19.27■□□□□ 0.68
COL18A1-204ENST00000400337 PRKCEQ02156 737 aa19.27■□□□□ 0.68
COL18A1-204ENST00000400337 NCOA4Q13772 614 aa19.27■□□□□ 0.68
COL18A1-204ENST00000400337 LRRC14Q15048 493 aa19.27■□□□□ 0.68
COL18A1-204ENST00000400337 C18orf8Q96DM3 657 aa19.27■□□□□ 0.68
COL18A1-204ENST00000400337 SERPINI1Q99574 410 aa19.27■□□□□ 0.68
COL18A1-204ENST00000400337 GMNCA6NCL1 334 aa19.27■□□□□ 0.67
COL18A1-204ENST00000400337 ATXN8OSP0DMR3 200 aa19.27■□□□□ 0.67
COL18A1-204ENST00000400337 MX2P20592 715 aa19.27■□□□□ 0.67
COL18A1-204ENST00000400337 SLC1A1P43005 524 aa19.27■□□□□ 0.67
COL18A1-204ENST00000400337 KLK7P49862 253 aa19.27■□□□□ 0.67
COL18A1-204ENST00000400337 SH3BGRP55822 239 aaPredicted RBP19.27■□□□□ 0.67
COL18A1-204ENST00000400337 TKFCQ3LXA3 575 aa19.27■□□□□ 0.67
COL18A1-204ENST00000400337 HIPK4Q8NE63 616 aa19.27■□□□□ 0.67
COL18A1-204ENST00000400337 SCG3Q8WXD2 468 aaKnown RBP19.27■□□□□ 0.67
COL18A1-204ENST00000400337 HPCAL4Q9UM19 191 aa19.27■□□□□ 0.67
COL18A1-204ENST00000400337 APOBEC2Q9Y235 224 aaKnown RBP19.27■□□□□ 0.67
COL18A1-204ENST00000400337 NSUN2Q08J23 767 aaKnown RBP eCLIP19.26■□□□□ 0.67
COL18A1-204ENST00000400337 NDUFAF2Q8N183 169 aa19.26■□□□□ 0.67
COL18A1-204ENST00000400337 ATP11CQ8NB49 1132 aa19.26■□□□□ 0.67
COL18A1-204ENST00000400337 BFARQ9NZS9 450 aa19.26■□□□□ 0.67
COL18A1-204ENST00000400337 SNX9Q9Y5X1 595 aa19.26■□□□□ 0.67
COL18A1-204ENST00000400337 TNPO2O14787 897 aaKnown RBP19.26■□□□□ 0.67
COL18A1-204ENST00000400337 SLC26A4O43511 780 aa19.26■□□□□ 0.67
COL18A1-204ENST00000400337 COPS2P61201 443 aa19.26■□□□□ 0.67
COL18A1-204ENST00000400337 KIAA1755Q5JYT7 1200 aa19.26■□□□□ 0.67
COL18A1-204ENST00000400337 ENGASEQ8NFI3 743 aa19.26■□□□□ 0.67
COL18A1-204ENST00000400337 SMARCAD1Q9H4L7 1026 aa19.26■□□□□ 0.67
COL18A1-204ENST00000400337 PPME1Q9Y570 386 aa19.26■□□□□ 0.67
COL18A1-204ENST00000400337 CCDC195A0A1B0GUA6 201 aa19.26■□□□□ 0.67
COL18A1-204ENST00000400337 GYPCP04921 128 aa19.26■□□□□ 0.67
COL18A1-204ENST00000400337 FGFR4P22455 802 aa19.26■□□□□ 0.67
COL18A1-204ENST00000400337 KIF19Q2TAC6 998 aa19.26■□□□□ 0.67
COL18A1-204ENST00000400337 TNIP3Q96KP6 325 aa19.26■□□□□ 0.67
COL18A1-204ENST00000400337 RIT2Q99578 217 aa19.26■□□□□ 0.67
COL18A1-204ENST00000400337 INO80Q9ULG1 1556 aaPredicted RBP19.26■□□□□ 0.67
COL18A1-204ENST00000400337 H3BRJ5 948 aa19.26■□□□□ 0.67
COL18A1-204ENST00000400337 MYOZ2Q9NPC6 264 aa19.26■□□□□ 0.67
COL18A1-204ENST00000400337 DCTN4Q9UJW0 460 aa19.26■□□□□ 0.67
COL18A1-204ENST00000400337 CEP170BQ9Y4F5 1589 aaPredicted RBP19.26■□□□□ 0.67
COL18A1-204ENST00000400337 KPNA7A9QM74 516 aa19.26■□□□□ 0.67
COL18A1-204ENST00000400337 KCNH7Q9NS40 1196 aa19.26■□□□□ 0.67
COL18A1-204ENST00000400337 TECPR2O15040 1411 aa19.25■□□□□ 0.67
COL18A1-204ENST00000400337 GMPSP49915 693 aaPredicted RBP19.25■□□□□ 0.67
COL18A1-204ENST00000400337 TAF11Q15544 211 aa19.25■□□□□ 0.67
COL18A1-204ENST00000400337 CATSPER3Q86XQ3 398 aa19.25■□□□□ 0.67
COL18A1-204ENST00000400337 SMIM24O75264 130 aa19.25■□□□□ 0.67
COL18A1-204ENST00000400337 RECQLP46063 649 aaPredicted RBP19.25■□□□□ 0.67
COL18A1-204ENST00000400337 HABP4Q5JVS0 413 aaKnown RBP19.25■□□□□ 0.67
COL18A1-204ENST00000400337 STYK1Q6J9G0 422 aa19.25■□□□□ 0.67
COL18A1-204ENST00000400337 ATL2Q8NHH9 583 aa19.25■□□□□ 0.67
COL18A1-204ENST00000400337 MOV10L1Q9BXT6 1211 aaKnown RBP19.25■□□□□ 0.67
COL18A1-204ENST00000400337 SLC13A1Q9BZW2 595 aa19.25■□□□□ 0.67
COL18A1-204ENST00000400337 UVRAGQ9P2Y5 699 aa19.25■□□□□ 0.67
COL18A1-204ENST00000400337 SPECC1L-ADORA2AF8WAN1 911 aa19.25■□□□□ 0.67
COL18A1-204ENST00000400337 DYNC1LI2O43237 492 aaPredicted RBP19.25■□□□□ 0.67
COL18A1-204ENST00000400337 TRPA1O75762 1119 aa19.25■□□□□ 0.67
COL18A1-204ENST00000400337 DRP2Q13474 957 aa19.25■□□□□ 0.67
COL18A1-204ENST00000400337 RNF219Q5W0B1 726 aaPredicted RBP19.25■□□□□ 0.67
COL18A1-204ENST00000400337 ZC3H13Q5T200 1668 aaKnown RBP19.25■□□□□ 0.67
COL18A1-204ENST00000400337 PPP1R3GB7ZBB8 358 aa19.25■□□□□ 0.67
COL18A1-204ENST00000400337 GYG2O15488 501 aa19.25■□□□□ 0.67
COL18A1-204ENST00000400337 MAP3K7O43318 606 aa19.25■□□□□ 0.67
COL18A1-204ENST00000400337 EIF3EP60228 445 aaKnown RBP19.25■□□□□ 0.67
COL18A1-204ENST00000400337 POU5F1BQ06416 359 aa19.25■□□□□ 0.67
COL18A1-204ENST00000400337 MMS22LQ6ZRQ5 1243 aa19.25■□□□□ 0.67
COL18A1-204ENST00000400337 CCNYL1Q8N7R7 359 aa19.25■□□□□ 0.67
COL18A1-204ENST00000400337 FGFR1OP2Q9NVK5 253 aa19.25■□□□□ 0.67
COL18A1-204ENST00000400337 GTSE1Q9NYZ3 720 aa19.25■□□□□ 0.67
COL18A1-204ENST00000400337 APOL1O14791 398 aa19.24■□□□□ 0.67
COL18A1-204ENST00000400337 ITPRIPL1Q6GPH6 555 aa19.24■□□□□ 0.67
COL18A1-204ENST00000400337 FRA10AC1Q70Z53 315 aa19.24■□□□□ 0.67
COL18A1-204ENST00000400337 RBBP8NLQ8NC74 664 aaPredicted RBP19.24■□□□□ 0.67
COL18A1-204ENST00000400337 TGS1Q96RS0 853 aaKnown RBP19.24■□□□□ 0.67
COL18A1-204ENST00000400337 CYTH2Q99418 400 aa19.24■□□□□ 0.67
COL18A1-204ENST00000400337 DEFB129Q9H1M3 183 aa19.24■□□□□ 0.67
COL18A1-204ENST00000400337 BTBD8Q5XKL5 378 aa19.24■□□□□ 0.67
COL18A1-204ENST00000400337 SPON2Q9BUD6 331 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms