RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 FOXN3O00409 490 aaPredicted RBP16.37■□□□□ 0.21
COL25A1-201ENST00000399126 B4GALT5O43286 388 aa16.37■□□□□ 0.21
COL25A1-201ENST00000399126 EXTL3O43909 919 aa16.37■□□□□ 0.21
COL25A1-201ENST00000399126 PPFIA4O75335 1185 aa16.37■□□□□ 0.21
COL25A1-201ENST00000399126 MMP3P08254 477 aa16.37■□□□□ 0.21
COL25A1-201ENST00000399126 KLRC1P26715 233 aa16.37■□□□□ 0.21
COL25A1-201ENST00000399126 SOX5P35711 763 aa16.37■□□□□ 0.21
COL25A1-201ENST00000399126 CDCA2Q69YH5 1023 aaPredicted RBP16.37■□□□□ 0.21
COL25A1-201ENST00000399126 SV2AQ7L0J3 742 aa16.37■□□□□ 0.21
COL25A1-201ENST00000399126 PI4K2AQ9BTU6 479 aa16.37■□□□□ 0.21
COL25A1-201ENST00000399126 TMEM134Q9H6X4 195 aa16.37■□□□□ 0.21
COL25A1-201ENST00000399126 MRFAP1Q9Y605 127 aa16.37■□□□□ 0.21
COL25A1-201ENST00000399126 A0A0B4J269 797 aa16.37■□□□□ 0.21
COL25A1-201ENST00000399126 ZNF233A6NK53 670 aa16.37■□□□□ 0.21
COL25A1-201ENST00000399126 H3BRB1 525 aa16.37■□□□□ 0.21
COL25A1-201ENST00000399126 IQCF3P0C7M6 154 aa16.37■□□□□ 0.21
COL25A1-201ENST00000399126 TNFSF9P41273 254 aa16.37■□□□□ 0.21
COL25A1-201ENST00000399126 OLFML2BQ68BL8 750 aa16.37■□□□□ 0.21
COL25A1-201ENST00000399126 KRT39Q6A163 491 aa16.37■□□□□ 0.21
COL25A1-201ENST00000399126 GET4Q7L5D6 327 aaPredicted RBP16.37■□□□□ 0.21
COL25A1-201ENST00000399126 TCP11Q8WWU5 503 aa16.37■□□□□ 0.21
COL25A1-201ENST00000399126 KCNN1Q92952 543 aa16.37■□□□□ 0.21
COL25A1-201ENST00000399126 TUT1Q9H6E5 874 aaKnown RBP16.37■□□□□ 0.21
COL25A1-201ENST00000399126 TLL2Q9Y6L7 1015 aa16.37■□□□□ 0.21
COL25A1-201ENST00000399126 ERICH4A6NGS2 130 aa16.36■□□□□ 0.21
COL25A1-201ENST00000399126 DYNC1LI2O43237 492 aaPredicted RBP16.36■□□□□ 0.21
COL25A1-201ENST00000399126 MOCS3O95396 460 aa16.36■□□□□ 0.21
COL25A1-201ENST00000399126 CCDC172P0C7W6 258 aa16.36■□□□□ 0.21
COL25A1-201ENST00000399126 PRKCIP41743 596 aa16.36■□□□□ 0.21
COL25A1-201ENST00000399126 STAT1P42224 750 aa16.36■□□□□ 0.21
COL25A1-201ENST00000399126 MCCD1P59942 119 aaPredicted RBP16.36■□□□□ 0.21
COL25A1-201ENST00000399126 NCBP1Q09161 790 aaKnown RBP16.36■□□□□ 0.21
COL25A1-201ENST00000399126 MXD4Q14582 209 aaPredicted RBP16.36■□□□□ 0.21
COL25A1-201ENST00000399126 MICAL1Q8TDZ2 1067 aa16.36■□□□□ 0.21
COL25A1-201ENST00000399126 MYO6Q9UM54 1294 aa16.36■□□□□ 0.21
COL25A1-201ENST00000399126 CTAGE9A4FU28 777 aa16.36■□□□□ 0.21
COL25A1-201ENST00000399126 N4BP1O75113 896 aaKnown RBP16.36■□□□□ 0.21
COL25A1-201ENST00000399126 VTNP04004 478 aa16.36■□□□□ 0.21
COL25A1-201ENST00000399126 ATP1A1P05023 1023 aaKnown RBP16.36■□□□□ 0.21
COL25A1-201ENST00000399126 PRKCBP05771 671 aa16.36■□□□□ 0.21
COL25A1-201ENST00000399126 SATB1Q01826 763 aa16.36■□□□□ 0.21
COL25A1-201ENST00000399126 TNFAIP2Q03169 654 aa16.36■□□□□ 0.21
COL25A1-201ENST00000399126 ICE2Q659A1 982 aa16.36■□□□□ 0.21
COL25A1-201ENST00000399126 IFNLR1Q8IU57 520 aaPredicted RBP16.36■□□□□ 0.21
COL25A1-201ENST00000399126 TMC2Q8TDI7 906 aa16.36■□□□□ 0.21
COL25A1-201ENST00000399126 KREMEN1Q96MU8 473 aa16.36■□□□□ 0.21
COL25A1-201ENST00000399126 NAPGQ99747 312 aaPredicted RBP16.36■□□□□ 0.21
COL25A1-201ENST00000399126 TMEM8AQ9HCN3 771 aa16.36■□□□□ 0.21
COL25A1-201ENST00000399126 ACP6Q9NPH0 428 aa16.36■□□□□ 0.21
COL25A1-201ENST00000399126 MGAMO43451 1857 aa16.36■□□□□ 0.21
COL25A1-201ENST00000399126 GOLGA6CA6NDK9 693 aa16.35■□□□□ 0.21
COL25A1-201ENST00000399126 GOLGA6BA6NDN3 693 aa16.35■□□□□ 0.21
COL25A1-201ENST00000399126 INO80B-WBP1J3KQ70 363 aa16.35■□□□□ 0.21
COL25A1-201ENST00000399126 P4HA2O15460 535 aa16.35■□□□□ 0.21
COL25A1-201ENST00000399126 BUB1O43683 1085 aa16.35■□□□□ 0.21
COL25A1-201ENST00000399126 GOLGA6DP0CG33 693 aa16.35■□□□□ 0.21
COL25A1-201ENST00000399126 CETN1Q12798 172 aa16.35■□□□□ 0.21
COL25A1-201ENST00000399126 USP6NLQ92738 828 aa16.35■□□□□ 0.21
COL25A1-201ENST00000399126 INO80BQ9C086 356 aaPredicted RBP16.35■□□□□ 0.21
COL25A1-201ENST00000399126 GOLGA6AQ9NYA3 693 aa16.35■□□□□ 0.21
COL25A1-201ENST00000399126 RBAKQ9NYW8 714 aaPredicted RBP16.35■□□□□ 0.21
COL25A1-201ENST00000399126 MYO1AQ9UBC5 1043 aa16.35■□□□□ 0.21
COL25A1-201ENST00000399126 ZNF865P0CJ78 1059 aaPredicted RBP16.35■□□□□ 0.21
COL25A1-201ENST00000399126 SCP2P22307 547 aa16.35■□□□□ 0.21
COL25A1-201ENST00000399126 PALB2Q86YC2 1186 aa16.35■□□□□ 0.21
COL25A1-201ENST00000399126 PPM1KQ8N3J5 372 aa16.35■□□□□ 0.21
COL25A1-201ENST00000399126 SDR16C5Q8N3Y7 309 aa16.35■□□□□ 0.21
COL25A1-201ENST00000399126 LNX1Q8TBB1 728 aaPredicted RBP16.35■□□□□ 0.21
COL25A1-201ENST00000399126 TSPAN18Q96SJ8 248 aa16.35■□□□□ 0.21
COL25A1-201ENST00000399126 ACO2Q99798 780 aaKnown RBP16.35■□□□□ 0.21
COL25A1-201ENST00000399126 ARHGAP39Q9C0H5 1083 aa16.35■□□□□ 0.21
COL25A1-201ENST00000399126 RASSF4Q9H2L5 321 aa16.35■□□□□ 0.21
COL25A1-201ENST00000399126 DDX3XO00571 662 aaKnown RBP eCLIP16.34■□□□□ 0.21
COL25A1-201ENST00000399126 ABLIM1O14639 778 aa16.34■□□□□ 0.21
COL25A1-201ENST00000399126 CLDN3O15551 220 aa16.34■□□□□ 0.21
COL25A1-201ENST00000399126 GAS2O43903 313 aaKnown RBP16.34■□□□□ 0.21
COL25A1-201ENST00000399126 FAM189A1O60320 539 aa16.34■□□□□ 0.21
COL25A1-201ENST00000399126 ABCD1P33897 745 aa16.34■□□□□ 0.21
COL25A1-201ENST00000399126 EFNA5P52803 228 aa16.34■□□□□ 0.21
COL25A1-201ENST00000399126 MAPK6Q16659 721 aa16.34■□□□□ 0.21
COL25A1-201ENST00000399126 IQSEC1Q6DN90 963 aa16.34■□□□□ 0.21
COL25A1-201ENST00000399126 GLYCTKQ8IVS8 523 aa16.34■□□□□ 0.21
COL25A1-201ENST00000399126 ZBTB8OSQ8IWT0 167 aa16.34■□□□□ 0.21
COL25A1-201ENST00000399126 TATDN2Q93075 761 aa16.34■□□□□ 0.21
COL25A1-201ENST00000399126 TCHPQ9BT92 498 aa16.34■□□□□ 0.21
COL25A1-201ENST00000399126 MRPL4Q9BYD3 311 aaKnown RBP16.34■□□□□ 0.21
COL25A1-201ENST00000399126 IFT122Q9HBG6 1241 aa16.34■□□□□ 0.21
COL25A1-201ENST00000399126 GJD2Q9UKL4 321 aa16.34■□□□□ 0.21
COL25A1-201ENST00000399126 TRIP12Q14669 1992 aaPredicted RBP16.34■□□□□ 0.21
COL25A1-201ENST00000399126 DCAF8L1A6NGE4 600 aa16.34■□□□□ 0.21
COL25A1-201ENST00000399126 FERP16591 822 aa16.34■□□□□ 0.21
COL25A1-201ENST00000399126 TNNI1P19237 187 aa16.34■□□□□ 0.21
COL25A1-201ENST00000399126 ZNF484Q5JVG2 852 aa16.34■□□□□ 0.21
COL25A1-201ENST00000399126 MARCH8Q5T0T0 291 aa16.34■□□□□ 0.21
COL25A1-201ENST00000399126 CYP4F22Q6NT55 531 aa16.34■□□□□ 0.21
COL25A1-201ENST00000399126 FBXL13Q8NEE6 735 aa16.34■□□□□ 0.21
COL25A1-201ENST00000399126 SLC20A1Q8WUM9 679 aa16.34■□□□□ 0.21
COL25A1-201ENST00000399126 ZCCHC17Q9NP64 241 aaKnown RBP16.34■□□□□ 0.21
COL25A1-201ENST00000399126 RAB20Q9NX57 234 aa16.34■□□□□ 0.21
COL25A1-201ENST00000399126 SLC5A4Q9NY91 659 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms