RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 KIFC3Q9BVG8 833 aa19.06■□□□□ 0.64
HLA-DQB1-204ENST00000399084 AGO2Q9UKV8 859 aaKnown RBP19.06■□□□□ 0.64
HLA-DQB1-204ENST00000399084 ALG6Q9Y672 507 aa19.06■□□□□ 0.64
HLA-DQB1-204ENST00000399084 CYP26A1O43174 497 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 RAD51CO43502 376 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 FARP2O94887 1054 aaPredicted RBP19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 SGPL1O95470 568 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 MYBL1P10243 752 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 CHRNB2P17787 502 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 ATP4AP20648 1035 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 GBP1P32455 592 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 GGCXP38435 758 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 USP8P40818 1118 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 DNA2P51530 1060 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 STAT5BP51692 787 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 GRM1Q13255 1194 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 TRMT1LQ7Z2T5 733 aaKnown RBP19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 NOP9Q86U38 636 aaKnown RBP19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 CD302Q8IX05 232 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 ZSWIM2Q8NEG5 633 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 TAS1R2Q8TE23 839 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 SLC20A1Q8WUM9 679 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 LRRC45Q96CN5 670 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 CEP89Q96ST8 783 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 FAM213AQ9BRX8 229 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 PLVAPQ9BX97 442 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 FAM114A2Q9NRY5 505 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 BTBD7Q9P203 1132 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 PRDM4Q9UKN5 801 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 KCNH4Q9UQ05 1017 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 PCDHB2Q9Y5E7 798 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 PTPRFP10586 1907 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 GSTTP1A0A1W2PQM5 241 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 AGPSO00116 658 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 MAFO75444 373 aaPredicted RBP19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 UBA1P22314 1058 aaKnown RBP19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 SLC26A2P50443 739 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 CNTN2Q02246 1040 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 TREML2Q5T2D2 321 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 IER5Q5VY09 327 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 ACAD10Q6JQN1 1059 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 SEPT14Q6ZU15 432 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 ARHGEF26Q96DR7 871 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 RAB17Q9H0T7 212 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 TAS2R14Q9NYV8 317 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 FZD1Q9UP38 647 aa19.05■□□□□ 0.64
HLA-DQB1-204ENST00000399084 FAM187AA6NFU0 413 aa19.04■□□□□ 0.64
HLA-DQB1-204ENST00000399084 GLRA2P23416 452 aa19.04■□□□□ 0.64
HLA-DQB1-204ENST00000399084 CARSP49589 748 aaKnown RBP19.04■□□□□ 0.64
HLA-DQB1-204ENST00000399084 PTENP60484 403 aa19.04■□□□□ 0.64
HLA-DQB1-204ENST00000399084 FMO1Q01740 532 aa19.04■□□□□ 0.64
HLA-DQB1-204ENST00000399084 SURF1Q15526 300 aa19.04■□□□□ 0.64
HLA-DQB1-204ENST00000399084 SPDYCQ5MJ68 293 aa19.04■□□□□ 0.64
HLA-DQB1-204ENST00000399084 TRIM72Q6ZMU5 477 aa19.04■□□□□ 0.64
HLA-DQB1-204ENST00000399084 FASTKD5Q7L8L6 764 aaKnown RBP19.04■□□□□ 0.64
HLA-DQB1-204ENST00000399084 IQCKQ8N0W5 287 aa19.04■□□□□ 0.64
HLA-DQB1-204ENST00000399084 BBXQ8WY36 941 aaPredicted RBP19.04■□□□□ 0.64
HLA-DQB1-204ENST00000399084 AZI2Q9H6S1 392 aa19.04■□□□□ 0.64
HLA-DQB1-204ENST00000399084 AVENQ9NQS1 362 aaPredicted RBP19.04■□□□□ 0.64
HLA-DQB1-204ENST00000399084 AGTPBP1Q9UPW5 1226 aa19.04■□□□□ 0.64
HLA-DQB1-204ENST00000399084 PAPPA2Q9BXP8 1791 aa19.04■□□□□ 0.64
HLA-DQB1-204ENST00000399084 LCTP09848 1927 aa19.04■□□□□ 0.64
HLA-DQB1-204ENST00000399084 A0A0B4J269 797 aa19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 SOWAHBA6NEL2 793 aa19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 SPDYE5A6NIY4 337 aa19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 RPS6KA5O75582 802 aa19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 C4BPAP04003 597 aaKnown RBP19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 DLATP10515 647 aaKnown RBP19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 TBXAS1P24557 533 aaPredicted RBP19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 DRG2P55039 364 aaKnown RBP19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 SP4Q02446 784 aa19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 DHX34Q14147 1143 aaKnown RBP19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 MXD4Q14582 209 aaPredicted RBP19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 PLPPR4Q7Z2D5 763 aa19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 NCAPG2Q86XI2 1143 aa19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 PALB2Q86YC2 1186 aa19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 KLHL7Q8IXQ5 586 aa19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 GTF3C2Q8WUA4 911 aaPredicted RBP19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 DDX1Q92499 740 aaKnown RBP19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 RNPC3Q96LT9 517 aaKnown RBP19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 PCDHB18PQ96TA0 734 aa19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 NFU1Q9UMS0 254 aa19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 COG5Q9UP83 839 aa19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 UTP11Q9Y3A2 253 aaKnown RBP19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 UNCXA6NJT0 531 aa19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 ADCY3O60266 1144 aa19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 CTNNA2P26232 953 aa19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 HSPA9P38646 679 aaKnown RBP19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 PPIL2Q13356 520 aa19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 CFAP58Q5T655 872 aa19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 SLC47A2Q86VL8 602 aa19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 CASKIN2Q8WXE0 1202 aa19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 IFT81Q8WYA0 676 aa19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 GOLPH3Q9H4A6 298 aa19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 MROH8Q9H579 483 aa19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 FAM204AQ9H8W3 233 aa19.03■□□□□ 0.64
HLA-DQB1-204ENST00000399084 SBF1O95248 1867 aa19.02■□□□□ 0.64
HLA-DQB1-204ENST00000399084 LGR5O75473 907 aa19.02■□□□□ 0.63
HLA-DQB1-204ENST00000399084 FGGP02679 453 aa19.02■□□□□ 0.63
HLA-DQB1-204ENST00000399084 POTEJP0CG39 1038 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms