RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 SPATA32Q96LK8 384 aa15.45■□□□□ 0.06
HLA-DQB1-202ENST00000399079 ASB2Q96Q27 587 aa15.45■□□□□ 0.06
HLA-DQB1-202ENST00000399079 RPS6KC1Q96S38 1066 aa15.45■□□□□ 0.06
HLA-DQB1-202ENST00000399079 VN1R3Q9BXE9 311 aa15.45■□□□□ 0.06
HLA-DQB1-202ENST00000399079 ENTPD7Q9NQZ7 604 aa15.45■□□□□ 0.06
HLA-DQB1-202ENST00000399079 CLDND1Q9NY35 253 aa15.45■□□□□ 0.06
HLA-DQB1-202ENST00000399079 TBX20Q9UMR3 447 aa15.45■□□□□ 0.06
HLA-DQB1-202ENST00000399079 COG5Q9UP83 839 aa15.45■□□□□ 0.06
HLA-DQB1-202ENST00000399079 FAN1Q9Y2M0 1017 aa15.45■□□□□ 0.06
HLA-DQB1-202ENST00000399079 C5orf42Q9H799 3197 aa15.44■□□□□ 0.06
HLA-DQB1-202ENST00000399079 POLR2DO15514 142 aaKnown RBP15.44■□□□□ 0.06
HLA-DQB1-202ENST00000399079 TOM1L1O75674 476 aa15.44■□□□□ 0.06
HLA-DQB1-202ENST00000399079 IDEP14735 1019 aa15.44■□□□□ 0.06
HLA-DQB1-202ENST00000399079 KRT85P78386 507 aa15.44■□□□□ 0.06
HLA-DQB1-202ENST00000399079 DLX2Q07687 328 aaPredicted RBP15.44■□□□□ 0.06
HLA-DQB1-202ENST00000399079 GLRA4Q5JXX5 417 aa15.44■□□□□ 0.06
HLA-DQB1-202ENST00000399079 RESP18Q5W5W9 173 aa15.44■□□□□ 0.06
HLA-DQB1-202ENST00000399079 VPS52Q8N1B4 723 aa15.44■□□□□ 0.06
HLA-DQB1-202ENST00000399079 AUTS2Q8WXX7 1259 aa15.44■□□□□ 0.06
HLA-DQB1-202ENST00000399079 BICD1Q96G01 975 aa15.44■□□□□ 0.06
HLA-DQB1-202ENST00000399079 PAAF1Q9BRP4 392 aa15.44■□□□□ 0.06
HLA-DQB1-202ENST00000399079 TMEM175Q9BSA9 504 aa15.44■□□□□ 0.06
HLA-DQB1-202ENST00000399079 HAPLN2Q9GZV7 340 aa15.44■□□□□ 0.06
HLA-DQB1-202ENST00000399079 TBC1D7Q9P0N9 293 aa15.44■□□□□ 0.06
HLA-DQB1-202ENST00000399079 H0YCG3 227 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 H3BQ06 376 aaPredicted RBP15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 LTBRP36941 435 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 GRM5P41594 1212 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 RBM10P98175 930 aaKnown RBP15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 GTF2BQ00403 316 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 GRIK3Q13003 919 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 COL19A1Q14993 1142 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 TPRNQ4KMQ1 711 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 ZPBP2Q6X784 338 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 ZNF720Q7Z2F6 126 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 DDX53Q86TM3 631 aaKnown RBP15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 IQUBQ8NA54 791 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 PABPC5Q96DU9 382 aaKnown RBP15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 TLE6Q9H808 572 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 GDPD2Q9HCC8 539 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 KBTBD4Q9NVX7 518 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 MARCH5Q9NX47 278 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 HNRNPDLO14979 420 aaKnown RBP15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 CLDN3O15551 220 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 THP07101 528 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 MCF2P10911 925 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 CA8P35219 290 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 MATR3P43243 847 aaKnown RBP eCLIP15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 NOLC1Q14978 699 aaKnown RBP eCLIP15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 NAB2Q15742 525 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 CTC1Q2NKJ3 1217 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 TJAP1Q5JTD0 557 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 APBB1IPQ7Z5R6 666 aaPredicted RBP15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 KCNN1Q92952 543 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 PPP2R3CQ969Q6 453 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 CCDC94Q9BW85 323 aaPredicted RBP15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 ZBP1Q9H171 429 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 IKZF4Q9H2S9 585 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 NGRNQ9NPE2 291 aaKnown RBP15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 FAM13BQ9NYF5 915 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 ATP6V1DQ9Y5K8 247 aa15.43■□□□□ 0.06
HLA-DQB1-202ENST00000399079 TDRD15B5MCY1 1934 aaKnown RBP15.42■□□□□ 0.06
HLA-DQB1-202ENST00000399079 ZMYM2Q9UBW7 1377 aa15.42■□□□□ 0.06
HLA-DQB1-202ENST00000399079 CASTOR2A6NHX0 329 aa15.42■□□□□ 0.06
HLA-DQB1-202ENST00000399079 TISP43B9A030 160 aa15.42■□□□□ 0.06
HLA-DQB1-202ENST00000399079 MEFVO15553 781 aaPredicted RBP15.42■□□□□ 0.06
HLA-DQB1-202ENST00000399079 TBX10O75333 385 aa15.42■□□□□ 0.06
HLA-DQB1-202ENST00000399079 CASP1P29466 404 aa15.42■□□□□ 0.06
HLA-DQB1-202ENST00000399079 LIG4P49917 911 aa15.42■□□□□ 0.06
HLA-DQB1-202ENST00000399079 MCL1Q07820 350 aa15.42■□□□□ 0.06
HLA-DQB1-202ENST00000399079 KCNA1Q09470 495 aa15.42■□□□□ 0.06
HLA-DQB1-202ENST00000399079 ADAM15Q13444 863 aa15.42■□□□□ 0.06
HLA-DQB1-202ENST00000399079 HERC4Q5GLZ8 1057 aaPredicted RBP15.42■□□□□ 0.06
HLA-DQB1-202ENST00000399079 PDE12Q6L8Q7 609 aaKnown RBP15.42■□□□□ 0.06
HLA-DQB1-202ENST00000399079 SLC39A4Q6P5W5 647 aa15.42■□□□□ 0.06
HLA-DQB1-202ENST00000399079 TAS1R1Q7RTX1 841 aa15.42■□□□□ 0.06
HLA-DQB1-202ENST00000399079 MAP4K3Q8IVH8 894 aa15.42■□□□□ 0.06
HLA-DQB1-202ENST00000399079 MRPL43Q8N983 215 aaKnown RBP15.42■□□□□ 0.06
HLA-DQB1-202ENST00000399079 ACAP3Q96P50 834 aa15.42■□□□□ 0.06
HLA-DQB1-202ENST00000399079 FGFBP2Q9BYJ0 223 aa15.42■□□□□ 0.06
HLA-DQB1-202ENST00000399079 TNMDQ9H2S6 317 aa15.42■□□□□ 0.06
HLA-DQB1-202ENST00000399079 CUEDC2Q9H467 287 aa15.42■□□□□ 0.06
HLA-DQB1-202ENST00000399079 MRPL44Q9H9J2 332 aaKnown RBP15.42■□□□□ 0.06
HLA-DQB1-202ENST00000399079 PANK4Q9NVE7 773 aa15.42■□□□□ 0.06
HLA-DQB1-202ENST00000399079 KCNH3Q9ULD8 1083 aa15.42■□□□□ 0.06
HLA-DQB1-202ENST00000399079 A0A1B0GVL5 298 aa15.41■□□□□ 0.06
HLA-DQB1-202ENST00000399079 FRMD3A2A2Y4 597 aa15.41■□□□□ 0.06
HLA-DQB1-202ENST00000399079 CARNS1A5YM72 827 aa15.41■□□□□ 0.06
HLA-DQB1-202ENST00000399079 C2orf71A6NGG8 1288 aa15.41■□□□□ 0.06
HLA-DQB1-202ENST00000399079 ANKRD63C9JTQ0 380 aa15.41■□□□□ 0.06
HLA-DQB1-202ENST00000399079 CXCL14O95715 111 aa15.41■□□□□ 0.06
HLA-DQB1-202ENST00000399079 GLP2RO95838 553 aa15.41■□□□□ 0.06
HLA-DQB1-202ENST00000399079 GAP43P17677 238 aa15.41■□□□□ 0.06
HLA-DQB1-202ENST00000399079 IGFBP6P24592 240 aaPredicted RBP15.41■□□□□ 0.06
HLA-DQB1-202ENST00000399079 CASP5P51878 434 aa15.41■□□□□ 0.06
HLA-DQB1-202ENST00000399079 YARSP54577 528 aaKnown RBP15.41■□□□□ 0.06
HLA-DQB1-202ENST00000399079 TUSC3Q13454 348 aa15.41■□□□□ 0.06
HLA-DQB1-202ENST00000399079 SMC1AQ14683 1233 aaKnown RBP15.41■□□□□ 0.06
HLA-DQB1-202ENST00000399079 AAK1Q2M2I8 961 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms