RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 ZNF653Q96CK0 615 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 MTFR1LQ9H019 292 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 TPX2Q9ULW0 747 aaKnown RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 PIN4Q9Y237 131 aaKnown RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 PCDHA5Q9Y5H7 936 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 FAM47DPA6NHR8 397 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 HSPA4LO95757 839 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 KIF23Q02241 960 aaPredicted RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 ILF2Q12905 390 aaKnown RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 CDH18Q13634 790 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 SUZ12Q15022 739 aaKnown RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 TKFCQ3LXA3 575 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 ST13P5Q8NFI4 369 aaPredicted RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 CERKQ8TCT0 537 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 TRIT1Q9H3H1 467 aaKnown RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 ZNF304Q9HCX3 659 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 KRT84Q9NSB2 600 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 TBC1D7Q9P0N9 293 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 MYPNQ86TC9 1320 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 STK36Q9NRP7 1315 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 B2RBV5 119 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 KIAA0391O15091 583 aaKnown RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 H2AFZP0C0S5 128 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 ITGB6P18564 788 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 CDH2P19022 906 aaPredicted RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 CRKLP46109 303 aaKnown RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 FKBP3Q00688 224 aaKnown RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 RAD51AP2Q09MP3 1159 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 CNTN1Q12860 1018 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 TRIM65Q6PJ69 517 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 H2AFVQ71UI9 128 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 DYMQ7RTS9 669 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 PLEKHA8Q96JA3 519 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 POP1Q99575 1024 aaKnown RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 MRPL9Q9BYD2 267 aaKnown RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 TMEM245Q9H330 911 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 CRYL1Q9Y2S2 319 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 WWP2O00308 870 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 NKRFO15226 690 aaKnown RBP eCLIP5.29□□□□□ -1.56
TTC3-204ENST00000399017 SNRNP200O75643 2136 aaKnown RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 CMA1P23946 247 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 VAMP7P51809 220 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 TNNI3KQ59H18 835 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 NOSTRINQ8IVI9 506 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 KLHL7Q8IXQ5 586 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 PDIK1LQ8N165 341 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 DEPDC7Q96QD5 511 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 SPON2Q9BUD6 331 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 DSCC1Q9BVC3 393 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 UBXN6Q9BZV1 441 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 PTPRZ1P23471 2315 aaPredicted RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 SAMD9Q5K651 1589 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 VPS4BO75351 444 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 ADCY5O95622 1261 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 C4BPBP20851 252 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 ST13P50502 369 aaKnown RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 TGFB2P61812 414 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 IL9RQ01113 521 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 CYP24A1Q07973 514 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 PPIL2Q13356 520 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 BEND3Q5T5X7 828 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 SPATS2Q86XZ4 545 aaKnown RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 B4GALNT2Q8NHY0 566 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 ARHGEF26Q96DR7 871 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 FRMD8Q9BZ67 464 aaPredicted RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 PTCH1Q13635 1447 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 TTLL8A6PVC2 850 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 MTSS1O43312 755 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 ODC1P11926 461 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 PIK3R1P27986 724 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 SLFN5Q08AF3 891 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 ADAM9Q13443 819 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 DCTN2Q13561 401 aaKnown RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 CYTH1Q15438 398 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 ZSCAN30Q86W11 494 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 CALML6Q8TD86 181 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 SARS2Q9NP81 518 aaKnown RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 INTS7Q9NVH2 962 aaKnown RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 SUCOQ9UBS9 1254 aaKnown RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 GH1P01241 217 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 IL31Q6EBC2 164 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 SH3GL3Q99963 347 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 NMRK2Q9NPI5 230 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 ARL15Q9NXU5 204 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 RPAP1Q9BWH6 1393 aaPredicted RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 P4HA2O15460 535 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 ECDO95905 644 aaPredicted RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 CKMP06732 381 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 RRM1P23921 792 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 GPR1P46091 355 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 PPP3CCP48454 512 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 ATP1A2P50993 1020 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 ATP2C1P98194 919 aaPredicted RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 ZNF284Q2VY69 593 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 ATP13A4Q4VNC1 1196 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 USP39Q53GS9 565 aaKnown RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 SYCP2LQ5T4T6 812 aa5.29□□□□□ -1.56
TTC3-204ENST00000399017 HEATR6Q6AI08 1181 aaKnown RBP5.29□□□□□ -1.56
TTC3-204ENST00000399017 SNRNP48Q6IEG0 339 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms