RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 SIX1Q15475 284 aaPredicted RBP27.46■■□□□ 1.99
COL13A1-203ENST00000398969 NIPA1Q7RTP0 329 aa27.46■■□□□ 1.99
COL13A1-203ENST00000398969 SELENOSQ9BQE4 189 aa27.46■■□□□ 1.99
COL13A1-203ENST00000398969 GLIS2Q9BZE0 524 aaPredicted RBP27.46■■□□□ 1.99
COL13A1-203ENST00000398969 AGO4Q9HCK5 861 aaKnown RBP27.46■■□□□ 1.99
COL13A1-203ENST00000398969 MTUS1Q9ULD2 1270 aa27.46■■□□□ 1.99
COL13A1-203ENST00000398969 CCPG1Q9ULG6 757 aa27.46■■□□□ 1.99
COL13A1-203ENST00000398969 SMIM23A6NLE4 172 aa27.45■■□□□ 1.98
COL13A1-203ENST00000398969 ANKRD63C9JTQ0 380 aa27.45■■□□□ 1.98
COL13A1-203ENST00000398969 SPOPO43791 374 aa27.45■■□□□ 1.98
COL13A1-203ENST00000398969 RASSF9O75901 435 aa27.45■■□□□ 1.98
COL13A1-203ENST00000398969 RPS12P25398 132 aaKnown RBP27.45■■□□□ 1.98
COL13A1-203ENST00000398969 CAP2P40123 477 aa27.45■■□□□ 1.98
COL13A1-203ENST00000398969 IFI35P80217 286 aaPredicted RBP27.45■■□□□ 1.98
COL13A1-203ENST00000398969 ADCY2Q08462 1091 aa27.45■■□□□ 1.98
COL13A1-203ENST00000398969 SPP2Q13103 211 aa27.45■■□□□ 1.98
COL13A1-203ENST00000398969 CCDC105Q8IYK2 499 aa27.45■■□□□ 1.98
COL13A1-203ENST00000398969 ATXN2LQ8WWM7 1075 aaKnown RBP27.45■■□□□ 1.98
COL13A1-203ENST00000398969 SEMA4DQ92854 862 aa27.45■■□□□ 1.98
COL13A1-203ENST00000398969 ZNF317Q96PQ6 595 aaPredicted RBP27.45■■□□□ 1.98
COL13A1-203ENST00000398969 TMEM109Q9BVC6 243 aa27.45■■□□□ 1.98
COL13A1-203ENST00000398969 SLC16A4O15374 487 aa27.44■■□□□ 1.98
COL13A1-203ENST00000398969 LYPLA2O95372 231 aa27.44■■□□□ 1.98
COL13A1-203ENST00000398969 EGFRP00533 1210 aa27.44■■□□□ 1.98
COL13A1-203ENST00000398969 RARAP10276 462 aa27.44■■□□□ 1.98
COL13A1-203ENST00000398969 FGFR4P22455 802 aa27.44■■□□□ 1.98
COL13A1-203ENST00000398969 MFAP3P55082 362 aa27.44■■□□□ 1.98
COL13A1-203ENST00000398969 TKFCQ3LXA3 575 aa27.44■■□□□ 1.98
COL13A1-203ENST00000398969 C6orf118Q5T5N4 469 aa27.44■■□□□ 1.98
COL13A1-203ENST00000398969 ART4Q93070 314 aa27.44■■□□□ 1.98
COL13A1-203ENST00000398969 CCDC114Q96M63 670 aa27.44■■□□□ 1.98
COL13A1-203ENST00000398969 RUNDC3BQ96NL0 473 aa27.44■■□□□ 1.98
COL13A1-203ENST00000398969 TMEM150BA6NC51 233 aa27.44■■□□□ 1.98
COL13A1-203ENST00000398969 ZNF536O15090 1300 aa27.44■■□□□ 1.98
COL13A1-203ENST00000398969 AGTP01019 485 aa27.44■■□□□ 1.98
COL13A1-203ENST00000398969 ICAM1P05362 532 aa27.44■■□□□ 1.98
COL13A1-203ENST00000398969 YWHABP31946 246 aaKnown RBP27.44■■□□□ 1.98
COL13A1-203ENST00000398969 PTGER2P43116 358 aa27.44■■□□□ 1.98
COL13A1-203ENST00000398969 MCCD1P59942 119 aaPredicted RBP27.44■■□□□ 1.98
COL13A1-203ENST00000398969 CROCCP2Q86T23 111 aa27.44■■□□□ 1.98
COL13A1-203ENST00000398969 CBWD2Q8IUF1 395 aa27.44■■□□□ 1.98
COL13A1-203ENST00000398969 ZNF653Q96CK0 615 aa27.44■■□□□ 1.98
COL13A1-203ENST00000398969 GPRC5CQ9NQ84 441 aa27.44■■□□□ 1.98
COL13A1-203ENST00000398969 LTBP3Q9NS15 1303 aa27.44■■□□□ 1.98
COL13A1-203ENST00000398969 GTF3C4Q9UKN8 822 aa27.44■■□□□ 1.98
COL13A1-203ENST00000398969 PTPN22Q9Y2R2 807 aa27.44■■□□□ 1.98
COL13A1-203ENST00000398969 NFIBO00712 420 aa27.43■■□□□ 1.98
COL13A1-203ENST00000398969 RIPK2O43353 540 aa27.43■■□□□ 1.98
COL13A1-203ENST00000398969 NCKAP1LP55160 1127 aa27.43■■□□□ 1.98
COL13A1-203ENST00000398969 PEX3P56589 373 aa27.43■■□□□ 1.98
COL13A1-203ENST00000398969 SLMAPQ14BN4 828 aa27.43■■□□□ 1.98
COL13A1-203ENST00000398969 IWS1Q96ST2 819 aa27.43■■□□□ 1.98
COL13A1-203ENST00000398969 SLC40A1Q9NP59 571 aa27.43■■□□□ 1.98
COL13A1-203ENST00000398969 SCAF8Q9UPN6 1271 aaKnown RBP27.43■■□□□ 1.98
COL13A1-203ENST00000398969 UBIAD1Q9Y5Z9 338 aa27.43■■□□□ 1.98
COL13A1-203ENST00000398969 PASKQ96RG2 1323 aa27.43■■□□□ 1.98
COL13A1-203ENST00000398969 RARGP13631 454 aa27.43■■□□□ 1.98
COL13A1-203ENST00000398969 CYP11B1P15538 503 aa27.43■■□□□ 1.98
COL13A1-203ENST00000398969 SNRNP35Q16560 246 aaKnown RBP27.43■■□□□ 1.98
COL13A1-203ENST00000398969 TBC1D10BQ4KMP7 808 aaPredicted RBP27.43■■□□□ 1.98
COL13A1-203ENST00000398969 LACTB2Q53H82 288 aaPredicted RBP27.43■■□□□ 1.98
COL13A1-203ENST00000398969 CYFIP1Q7L576 1253 aa27.43■■□□□ 1.98
COL13A1-203ENST00000398969 C12orf50Q8NA57 414 aaPredicted RBP27.43■■□□□ 1.98
COL13A1-203ENST00000398969 UHMK1Q8TAS1 419 aaKnown RBP27.43■■□□□ 1.98
COL13A1-203ENST00000398969 EPS8L3Q8TE67 593 aaKnown RBP27.43■■□□□ 1.98
COL13A1-203ENST00000398969 KLC4Q9NSK0 619 aa27.42■■□□□ 1.98
COL13A1-203ENST00000398969 UVRAGQ9P2Y5 699 aa27.42■■□□□ 1.98
COL13A1-203ENST00000398969 ADSSP30520 456 aa27.42■■□□□ 1.98
COL13A1-203ENST00000398969 KCNJ1P48048 391 aa27.42■■□□□ 1.98
COL13A1-203ENST00000398969 RWDD2BP57060 319 aa27.42■■□□□ 1.98
COL13A1-203ENST00000398969 CDR2Q01850 454 aa27.42■■□□□ 1.98
COL13A1-203ENST00000398969 UGCGQ16739 394 aa27.42■■□□□ 1.98
COL13A1-203ENST00000398969 KRT39Q6A163 491 aa27.42■■□□□ 1.98
COL13A1-203ENST00000398969 CHADLQ6NUI6 762 aa27.42■■□□□ 1.98
COL13A1-203ENST00000398969 CLEC4DQ8WXI8 215 aa27.42■■□□□ 1.98
COL13A1-203ENST00000398969 CCT6BQ92526 530 aa27.42■■□□□ 1.98
COL13A1-203ENST00000398969 P3H4Q92791 437 aa27.42■■□□□ 1.98
COL13A1-203ENST00000398969 ASTN2O75129 1339 aaPredicted RBP27.41■■□□□ 1.98
COL13A1-203ENST00000398969 MRPS9P82933 396 aaKnown RBP27.41■■□□□ 1.98
COL13A1-203ENST00000398969 HELQQ8TDG4 1101 aa27.41■■□□□ 1.98
COL13A1-203ENST00000398969 TIPINQ9BVW5 301 aa27.41■■□□□ 1.98
COL13A1-203ENST00000398969 TNFAIP8L3Q5GJ75 292 aa27.41■■□□□ 1.98
COL13A1-203ENST00000398969 PCNX4Q63HM2 1172 aa27.41■■□□□ 1.98
COL13A1-203ENST00000398969 RNF207Q6ZRF8 634 aa27.41■■□□□ 1.98
COL13A1-203ENST00000398969 CCDC127Q96BQ5 260 aa27.41■■□□□ 1.98
COL13A1-203ENST00000398969 TULP1O00294 542 aaPredicted RBP27.4■■□□□ 1.98
COL13A1-203ENST00000398969 SCTRP47872 440 aa27.4■■□□□ 1.98
COL13A1-203ENST00000398969 PDE6CP51160 858 aa27.4■■□□□ 1.98
COL13A1-203ENST00000398969 MTMR1Q13613 665 aa27.4■■□□□ 1.98
COL13A1-203ENST00000398969 NSMFQ6X4W1 530 aa27.4■■□□□ 1.98
COL13A1-203ENST00000398969 SAAL1Q96ER3 474 aa27.4■■□□□ 1.98
COL13A1-203ENST00000398969 LRRC19Q9H756 370 aa27.4■■□□□ 1.98
COL13A1-203ENST00000398969 COQ4Q9Y3A0 265 aa27.4■■□□□ 1.98
COL13A1-203ENST00000398969 FZD9O00144 591 aa27.39■■□□□ 1.98
COL13A1-203ENST00000398969 ECEL1O95672 775 aa27.39■■□□□ 1.98
COL13A1-203ENST00000398969 SLCO1A2P46721 670 aa27.39■■□□□ 1.98
COL13A1-203ENST00000398969 GMPSP49915 693 aaPredicted RBP27.39■■□□□ 1.98
COL13A1-203ENST00000398969 MICALL2Q8IY33 904 aa27.39■■□□□ 1.98
COL13A1-203ENST00000398969 CCDC197Q8NCU1 140 aa27.39■■□□□ 1.98
COL13A1-203ENST00000398969 PARD3BQ8TEW8 1205 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms