RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ATN1P54259 1190 aaPredicted RBP15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 PIP4K2CQ8TBX8 421 aa15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 RAD54LQ92698 747 aa15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 SEPT5Q99719 369 aaPredicted RBP15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 KITP10721 976 aa15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 TOB2Q14106 344 aaPredicted RBP15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 EPHA7Q15375 998 aa15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 C11orf70Q9BRQ4 267 aa15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 RRN3P2A6NIE6 340 aa15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 E5RI56 91 aa15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 CA4P22748 312 aa15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 GFPT1Q06210 699 aaPredicted RBP15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 AP1B1Q10567 949 aa15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 BFSP2Q13515 415 aa15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 HIPK4Q8NE63 616 aa15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 EHD4Q9H223 541 aa15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 STARD7Q9NQZ5 370 aa15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 TTC7AQ9ULT0 858 aaPredicted RBP15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 CYBBP04839 570 aa15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 ICAM1P05362 532 aa15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 TAC1P20366 129 aa15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 TMEM259Q4ZIN3 620 aa15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 UNC13DQ70J99 1090 aa15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 KDELC2Q7Z4H8 507 aa15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 ASNSD1Q9NWL6 643 aa15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 VPS39Q96JC1 886 aa15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 FAM205AQ6ZU69 1335 aa15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 HSPA6P17066 643 aa15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 CAPRIN1Q14444 709 aaKnown RBP15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 ATG16L1Q676U5 607 aa15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 GSPT2Q8IYD1 628 aaKnown RBP15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 XXYLT1Q8NBI6 393 aa15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 ACER1Q8TDN7 264 aa15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 EIF2AK1Q9BQI3 630 aaKnown RBP15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 NFU1Q9UMS0 254 aa15.12■□□□□ 0.01
PCDHA11-201ENST00000398640 C2CD2LO14523 706 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 THEMIS2Q5TEJ8 643 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 RESP18Q5W5W9 173 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 XRRA1Q6P2D8 792 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 RNF25Q96BH1 459 aaPredicted RBP15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 ACAP3Q96P50 834 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 NDFIP2Q9NV92 336 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 CLCA2Q9UQC9 943 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 CCDC195A0A1B0GUA6 201 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 HNRNPCL2B2RXH8 293 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 HNRNPCL1O60812 293 aaKnown RBP15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 GCKP35557 465 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 COASYQ13057 564 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 E2F5Q15329 346 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 LMBRD2Q68DH5 695 aaPredicted RBP15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 AAASQ9NRG9 546 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 GTSE1Q9NYZ3 720 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 DNAJC6O75061 913 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 VCAM1P19320 739 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 PAPOLAP51003 745 aaKnown RBP15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 ARHGDIAP52565 204 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 TBCCQ15814 346 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 ZC3H15Q8WU90 426 aaKnown RBP15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 SIGLEC1Q9BZZ2 1709 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 ERAP1Q9NZ08 941 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 TJP2Q9UDY2 1190 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 SFMBT1Q9UHJ3 866 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 CYP2C9P11712 490 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 PPIL2Q13356 520 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 ZNF746Q6NUN9 644 aaPredicted RBP15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 TMEM35BQ8NCS4 154 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 SLC4A9Q96Q91 983 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 SH2D3AQ9BRG2 576 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 DONSONQ9NYP3 566 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 SALL1Q9NSC2 1324 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 TRAPPC3O43617 180 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 MAP2K2P36507 400 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 GYS2P54840 703 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 XKR3Q5GH77 459 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 SRBD1Q8N5C6 995 aaKnown RBP15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 EFHD1Q9BUP0 239 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 NR2E3Q9Y5X4 410 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 MYPNQ86TC9 1320 aa15.11■□□□□ 0.01
PCDHA11-201ENST00000398640 CFAP69A5D8W1 941 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 CDC27P30260 824 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 YWHABP31946 246 aaKnown RBP15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 ARL4DP49703 201 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 HERVK_113P62684 666 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 IMPG1Q17R60 797 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 TTC23LQ6PF05 361 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 PARD6BQ9BYG5 372 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 VPS11Q9H270 941 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 HMX1Q9NP08 348 aaPredicted RBP15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 DDTLA6NHG4 134 aaPredicted RBP15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 H3BRJ5 948 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 PRPF4O43172 522 aaKnown RBP eCLIP15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 ANP32DO95626 131 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 SLC8A1P32418 973 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 PEX19P40855 299 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 ST8SIA6P61647 398 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 FKBP1BP68106 108 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 TRIM59Q8IWR1 403 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 KCNQ5Q9NR82 932 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 NPHP3-ACAD11A0A0J9YXS1 232 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 PP2D1A8MPX8 630 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms