RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 STRIP1Q5VSL9 837 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 TRIM72Q6ZMU5 477 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 XXYLT1Q8NBI6 393 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 SH3TC2Q8TF17 1288 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 CNKSR2Q8WXI2 1034 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 SLC5A5Q92911 643 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 PRMT1Q99873 361 aaKnown RBP5.81□□□□□ -1.48
PTPRD-205ENST00000397611 SSU72Q9NP77 194 aaKnown RBP5.81□□□□□ -1.48
PTPRD-205ENST00000397611 PACSIN2Q9UNF0 486 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-205ENST00000397611 SNX24Q9Y343 169 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 TSHRP16473 764 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 ALDH1B1P30837 517 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 RNASELQ05823 741 aaKnown RBP5.81□□□□□ -1.48
PTPRD-205ENST00000397611 LLGL1Q15334 1064 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 ADGRF4Q8IZF3 695 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 CCDC89Q8N998 374 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 HIPK4Q8NE63 616 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 GRK7Q8WTQ7 553 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 FBXL18Q96ME1 805 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 NTPCRQ9BSD7 190 aaKnown RBP5.81□□□□□ -1.48
PTPRD-205ENST00000397611 DDX47Q9H0S4 455 aaKnown RBP5.81□□□□□ -1.48
PTPRD-205ENST00000397611 STOML1Q9UBI4 398 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-205ENST00000397611 GNAT1P11488 350 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 SLC9A1P19634 815 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 MX2P20592 715 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 ICA1Q05084 483 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 CTAGE3PQ8IX95 158 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 FAXDC2Q96IV6 333 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 PITPNM3Q9BZ71 974 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 TBC1D22BQ9NU19 505 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 GCNT4Q9P109 453 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 TXNDC16Q9P2K2 825 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 MRPL11Q9Y3B7 192 aaKnown RBP5.81□□□□□ -1.48
PTPRD-205ENST00000397611 POTEB3A0JP26 581 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 POTECB2RU33 542 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 CHMP2AO43633 222 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 PHF2O75151 1096 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 FAM155BO75949 473 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 ACSL3O95573 720 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 LMNAP02545 664 aaKnown RBP5.81□□□□□ -1.48
PTPRD-205ENST00000397611 FGGP02679 453 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 BMP3P12645 472 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 ERFP50548 548 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 SLC12A3P55017 1021 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 GPC5P78333 572 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 MAP3K21Q5TCX8 1036 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 CYP4F22Q6NT55 531 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 RINT1Q6NUQ1 792 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 POTEBQ6S5H4 581 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 RFX8Q6ZV50 586 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 FRMD8Q9BZ67 464 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-205ENST00000397611 ANKEF1Q9NU02 776 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 ZFP69BQ9UJL9 534 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 ALG6Q9Y672 507 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 CCT8L1PA6NM43 557 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 E7ENQ6 273 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 CHN1P15882 459 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 KCNA3P22001 575 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 BFSP1Q12934 665 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 PIGWQ7Z7B1 504 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 CATSPER3Q86XQ3 398 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 OLIG1Q8TAK6 271 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 REEP2Q9BRK0 252 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 FAM124BQ9H5Z6 455 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-205ENST00000397611 AGPAT3Q9NRZ7 376 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 ETAA1Q9NY74 926 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 LGALS13Q9UHV8 139 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 TRPC6Q9Y210 931 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 IGLV3-22A0A075B6J6 115 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 A0A0G2JND7 137 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 F5H6K3 240 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 UBTFL6P0CB48 400 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-205ENST00000397611 PEX5P50542 639 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 KLRC3Q07444 240 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 EAPPQ56P03 285 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-205ENST00000397611 DPH6Q7L8W6 267 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 PALM2Q8IXS6 379 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 TEKT4Q8WW24 435 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 WHRNQ9P202 907 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 JAG2Q9Y219 1238 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 ASTN1O14525 1302 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 ECEL1O95672 775 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 POLD1P28340 1107 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 MXI1P50539 228 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 PMS2P54278 862 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 SLC13A5Q86YT5 568 aaPredicted RBP5.8□□□□□ -1.48
PTPRD-205ENST00000397611 ARHGAP18Q8N392 663 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 FBXO25Q8TCJ0 367 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.8□□□□□ -1.48
PTPRD-205ENST00000397611 PSMD10O75832 226 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 CCND1P24385 295 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 FIZ1Q96SL8 496 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 DNAJC12Q9UKB3 198 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 IGF2BP3O00425 579 aaKnown RBP eCLIP5.8□□□□□ -1.48
PTPRD-205ENST00000397611 CAND2O75155 1236 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 ESRRAP11474 423 aaPredicted RBP5.8□□□□□ -1.48
PTPRD-205ENST00000397611 CENPCQ03188 943 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 TDRPQ86YL5 185 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 FAM71AQ8IYT1 594 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms