RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 SKIP12755 728 aa25.62■■□□□ 1.69
TSPAN4-202ENST00000397396 PSMD6Q15008 389 aa25.62■■□□□ 1.69
TSPAN4-202ENST00000397396 VWA3BQ502W6 1294 aa25.62■■□□□ 1.69
TSPAN4-202ENST00000397396 DCAF17Q5H9S7 520 aaPredicted RBP25.62■■□□□ 1.69
TSPAN4-202ENST00000397396 COL13A1Q5TAT6 717 aaPredicted RBP25.62■■□□□ 1.69
TSPAN4-202ENST00000397396 APTXQ7Z2E3 356 aaKnown RBP25.62■■□□□ 1.69
TSPAN4-202ENST00000397396 THNSL1Q8IYQ7 743 aa25.62■■□□□ 1.69
TSPAN4-202ENST00000397396 MRFAP1L1Q96HT8 127 aa25.62■■□□□ 1.69
TSPAN4-202ENST00000397396 FNBP1Q96RU3 617 aa25.62■■□□□ 1.69
TSPAN4-202ENST00000397396 TRAIPQ9BWF2 469 aa25.62■■□□□ 1.69
TSPAN4-202ENST00000397396 VPS16Q9H269 839 aa25.62■■□□□ 1.69
TSPAN4-202ENST00000397396 NDST4Q9H3R1 872 aa25.62■■□□□ 1.69
TSPAN4-202ENST00000397396 RPF1Q9H9Y2 349 aaKnown RBP25.62■■□□□ 1.69
TSPAN4-202ENST00000397396 IL18RAPO95256 599 aa25.61■■□□□ 1.69
TSPAN4-202ENST00000397396 ADRB2P07550 413 aa25.61■■□□□ 1.69
TSPAN4-202ENST00000397396 ACOT2P49753 483 aa25.61■■□□□ 1.69
TSPAN4-202ENST00000397396 ZNF75DP51815 510 aa25.61■■□□□ 1.69
TSPAN4-202ENST00000397396 CRELD2Q6UXH1 353 aaPredicted RBP25.61■■□□□ 1.69
TSPAN4-202ENST00000397396 CDR2LQ86X02 465 aaPredicted RBP25.61■■□□□ 1.69
TSPAN4-202ENST00000397396 CD302Q8IX05 232 aa25.61■■□□□ 1.69
TSPAN4-202ENST00000397396 RTN4Q9NQC3 1192 aaKnown RBP25.61■■□□□ 1.69
TSPAN4-202ENST00000397396 AFPP02771 609 aaKnown RBP25.6■■□□□ 1.69
TSPAN4-202ENST00000397396 STAG3L1P0CL83 205 aa25.6■■□□□ 1.69
TSPAN4-202ENST00000397396 GTF2H1P32780 548 aa25.6■■□□□ 1.69
TSPAN4-202ENST00000397396 YARSP54577 528 aaKnown RBP25.6■■□□□ 1.69
TSPAN4-202ENST00000397396 SEPT8Q92599 483 aa25.6■■□□□ 1.69
TSPAN4-202ENST00000397396 SLC35C1Q96A29 364 aa25.6■■□□□ 1.69
TSPAN4-202ENST00000397396 ACAP3Q96P50 834 aa25.6■■□□□ 1.69
TSPAN4-202ENST00000397396 XPO4Q9C0E2 1151 aaKnown RBP25.6■■□□□ 1.69
TSPAN4-202ENST00000397396 TOPORSQ9NS56 1045 aaPredicted RBP25.6■■□□□ 1.69
TSPAN4-202ENST00000397396 KIAA0355O15063 1070 aa25.59■■□□□ 1.69
TSPAN4-202ENST00000397396 ADCY5O95622 1261 aa25.59■■□□□ 1.69
TSPAN4-202ENST00000397396 AP3M2P53677 418 aa25.59■■□□□ 1.69
TSPAN4-202ENST00000397396 MBTPS1Q14703 1052 aa25.59■■□□□ 1.69
TSPAN4-202ENST00000397396 MIIPQ5JXC2 388 aa25.59■■□□□ 1.69
TSPAN4-202ENST00000397396 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.59■■□□□ 1.69
TSPAN4-202ENST00000397396 PARD3BQ8TEW8 1205 aa25.59■■□□□ 1.69
TSPAN4-202ENST00000397396 PPP1R12CQ9BZL4 782 aa25.59■■□□□ 1.69
TSPAN4-202ENST00000397396 PLEKHA5Q9HAU0 1116 aa25.59■■□□□ 1.69
TSPAN4-202ENST00000397396 P4HA2O15460 535 aa25.58■■□□□ 1.69
TSPAN4-202ENST00000397396 CDC25BP30305 580 aa25.58■■□□□ 1.69
TSPAN4-202ENST00000397396 CETN1Q12798 172 aa25.58■■□□□ 1.69
TSPAN4-202ENST00000397396 KCNH2Q12809 1159 aa25.58■■□□□ 1.69
TSPAN4-202ENST00000397396 DSC3Q14574 896 aa25.58■■□□□ 1.69
TSPAN4-202ENST00000397396 NR1I3Q14994 352 aa25.58■■□□□ 1.69
TSPAN4-202ENST00000397396 UBXN11Q5T124 520 aa25.58■■□□□ 1.69
TSPAN4-202ENST00000397396 ZSWIM2Q8NEG5 633 aa25.58■■□□□ 1.69
TSPAN4-202ENST00000397396 TSPAN18Q96SJ8 248 aa25.58■■□□□ 1.69
TSPAN4-202ENST00000397396 HTATIP2Q9BUP3 242 aa25.58■■□□□ 1.69
TSPAN4-202ENST00000397396 EIF2AQ9BY44 585 aaKnown RBP25.58■■□□□ 1.69
TSPAN4-202ENST00000397396 ASB7Q9H672 318 aa25.58■■□□□ 1.69
TSPAN4-202ENST00000397396 C1orf112Q9NSG2 853 aa25.58■■□□□ 1.69
TSPAN4-202ENST00000397396 FAM105AQ9NUU6 356 aa25.58■■□□□ 1.69
TSPAN4-202ENST00000397396 PRKAG2Q9UGJ0 569 aa25.58■■□□□ 1.69
TSPAN4-202ENST00000397396 BRCA2P51587 3418 aa25.58■■□□□ 1.68
TSPAN4-202ENST00000397396 AP5Z1O43299 807 aa25.57■■□□□ 1.68
TSPAN4-202ENST00000397396 CXCL10P02778 98 aa25.57■■□□□ 1.68
TSPAN4-202ENST00000397396 UBXN1Q04323 297 aa25.57■■□□□ 1.68
TSPAN4-202ENST00000397396 PLEKHG4Q58EX7 1191 aa25.57■■□□□ 1.68
TSPAN4-202ENST00000397396 NT5DC4Q86YG4 428 aa25.57■■□□□ 1.68
TSPAN4-202ENST00000397396 CEP120Q8N960 986 aa25.57■■□□□ 1.68
TSPAN4-202ENST00000397396 ABHD8Q96I13 439 aa25.57■■□□□ 1.68
TSPAN4-202ENST00000397396 NAP1L5Q96NT1 182 aaPredicted RBP25.57■■□□□ 1.68
TSPAN4-202ENST00000397396 CGRRF1Q99675 332 aa25.57■■□□□ 1.68
TSPAN4-202ENST00000397396 RNF216Q9NWF9 866 aaPredicted RBP25.57■■□□□ 1.68
TSPAN4-202ENST00000397396 A0A1W2PQC6 194 aa25.56■■□□□ 1.68
TSPAN4-202ENST00000397396 GTPBP10A4D1E9 387 aaKnown RBP25.56■■□□□ 1.68
TSPAN4-202ENST00000397396 NBNO60934 754 aa25.56■■□□□ 1.68
TSPAN4-202ENST00000397396 TIMP1P01033 207 aa25.56■■□□□ 1.68
TSPAN4-202ENST00000397396 TNFSF9P41273 254 aa25.56■■□□□ 1.68
TSPAN4-202ENST00000397396 OSTNP61366 133 aa25.56■■□□□ 1.68
TSPAN4-202ENST00000397396 CLDN10P78369 228 aa25.56■■□□□ 1.68
TSPAN4-202ENST00000397396 ENOX2Q16206 610 aaKnown RBP25.56■■□□□ 1.68
TSPAN4-202ENST00000397396 ZBTB41Q5SVQ8 909 aa25.56■■□□□ 1.68
TSPAN4-202ENST00000397396 WDR49Q8IV35 697 aa25.56■■□□□ 1.68
TSPAN4-202ENST00000397396 CCDC127Q96BQ5 260 aa25.56■■□□□ 1.68
TSPAN4-202ENST00000397396 PGBD4Q96DM1 585 aa25.56■■□□□ 1.68
TSPAN4-202ENST00000397396 WNT8AQ9H1J5 351 aa25.56■■□□□ 1.68
TSPAN4-202ENST00000397396 PRDM5Q9NQX1 630 aaPredicted RBP25.56■■□□□ 1.68
TSPAN4-202ENST00000397396 IPPQ9Y573 584 aa25.56■■□□□ 1.68
TSPAN4-202ENST00000397396 PCDHB2Q9Y5E7 798 aa25.56■■□□□ 1.68
TSPAN4-202ENST00000397396 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.56■■□□□ 1.68
TSPAN4-202ENST00000397396 LRRIQ3A6PVS8 624 aaPredicted RBP25.55■■□□□ 1.68
TSPAN4-202ENST00000397396 PMM2O15305 246 aa25.55■■□□□ 1.68
TSPAN4-202ENST00000397396 ZNF623O75123 536 aa25.55■■□□□ 1.68
TSPAN4-202ENST00000397396 DLATP10515 647 aaKnown RBP25.55■■□□□ 1.68
TSPAN4-202ENST00000397396 RAG1P15918 1043 aa25.55■■□□□ 1.68
TSPAN4-202ENST00000397396 CYP2C18P33260 490 aa25.55■■□□□ 1.68
TSPAN4-202ENST00000397396 SEZ6Q53EL9 994 aa25.55■■□□□ 1.68
TSPAN4-202ENST00000397396 TMEM199Q8N511 208 aa25.55■■□□□ 1.68
TSPAN4-202ENST00000397396 ADAM2Q99965 735 aa25.55■■□□□ 1.68
TSPAN4-202ENST00000397396 TMX1Q9H3N1 280 aa25.55■■□□□ 1.68
TSPAN4-202ENST00000397396 UBN1Q9NPG3 1134 aa25.55■■□□□ 1.68
TSPAN4-202ENST00000397396 RGS18Q9NS28 235 aa25.55■■□□□ 1.68
TSPAN4-202ENST00000397396 UMODL1Q5DID0 1318 aa25.55■■□□□ 1.68
TSPAN4-202ENST00000397396 A0A0U1RQF3 1178 aa25.54■■□□□ 1.68
TSPAN4-202ENST00000397396 PFKMP08237 780 aa25.54■■□□□ 1.68
TSPAN4-202ENST00000397396 TRIM49P0CI25 452 aa25.54■■□□□ 1.68
TSPAN4-202ENST00000397396 TRIM49CP0CI26 452 aa25.54■■□□□ 1.68
TSPAN4-202ENST00000397396 CXCL8P10145 99 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms