RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 FAM187BQ17R55 369 aa16.21■□□□□ 0.19
CAPN3-207ENST00000397200 TMEM132AQ24JP5 1023 aa16.21■□□□□ 0.19
CAPN3-207ENST00000397200 LRRC8DQ7L1W4 858 aa16.21■□□□□ 0.19
CAPN3-207ENST00000397200 HS2ST1Q7LGA3 356 aa16.21■□□□□ 0.19
CAPN3-207ENST00000397200 CATSPER4Q7RTX7 472 aa16.21■□□□□ 0.19
CAPN3-207ENST00000397200 HIPK3Q9H422 1215 aa16.21■□□□□ 0.19
CAPN3-207ENST00000397200 TMEM39AQ9NV64 488 aa16.21■□□□□ 0.19
CAPN3-207ENST00000397200 TYW1Q9NV66 732 aaKnown RBP16.21■□□□□ 0.19
CAPN3-207ENST00000397200 EPN1Q9Y6I3 576 aaPredicted RBP16.21■□□□□ 0.19
CAPN3-207ENST00000397200 TANC1Q9C0D5 1861 aa16.2■□□□□ 0.18
CAPN3-207ENST00000397200 PDXKO00764 312 aa16.2■□□□□ 0.18
CAPN3-207ENST00000397200 CALUO43852 315 aaPredicted RBP16.2■□□□□ 0.18
CAPN3-207ENST00000397200 FGFR4P22455 802 aa16.2■□□□□ 0.18
CAPN3-207ENST00000397200 LIG4P49917 911 aa16.2■□□□□ 0.18
CAPN3-207ENST00000397200 RBM10P98175 930 aaKnown RBP16.2■□□□□ 0.18
CAPN3-207ENST00000397200 NFIL3Q16649 462 aa16.2■□□□□ 0.18
CAPN3-207ENST00000397200 CCDC170Q8IYT3 715 aa16.2■□□□□ 0.18
CAPN3-207ENST00000397200 GOLGA5Q8TBA6 731 aa16.2■□□□□ 0.18
CAPN3-207ENST00000397200 MYO1AQ9UBC5 1043 aa16.2■□□□□ 0.18
CAPN3-207ENST00000397200 TBX21Q9UL17 535 aa16.2■□□□□ 0.18
CAPN3-207ENST00000397200 NOC2LQ9Y3T9 749 aaKnown RBP16.2■□□□□ 0.18
CAPN3-207ENST00000397200 ALPK3Q96L96 1907 aa16.2■□□□□ 0.18
CAPN3-207ENST00000397200 CNTNAP2Q9UHC6 1331 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 A0A0U1RQJ8 604 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 TGFB1I1O43294 461 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 RPS6KA5O75582 802 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 PIGRP01833 764 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 EDN1P05305 212 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 GHRP10912 638 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 CASQ1P31415 396 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 AMHR2Q16671 573 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 FBXO47Q5MNV8 452 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 TRAF7Q6Q0C0 670 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 ZPBP2Q6X784 338 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 ZNF397Q8NF99 534 aaPredicted RBP16.19■□□□□ 0.18
CAPN3-207ENST00000397200 ATRIPQ8WXE1 791 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 TARS2Q9BW92 718 aaKnown RBP16.19■□□□□ 0.18
CAPN3-207ENST00000397200 PPP1R12CQ9BZL4 782 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 IKZF4Q9H2S9 585 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 CGNQ9P2M7 1197 aaKnown RBP16.19■□□□□ 0.18
CAPN3-207ENST00000397200 PLAGL2Q9UPG8 496 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 USP20Q9Y2K6 914 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 SQORQ9Y6N5 450 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 B4GALT5O43286 388 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 TSPAN1O60635 241 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 SNRPFP62306 86 aaKnown RBP16.19■□□□□ 0.18
CAPN3-207ENST00000397200 KCNMA1Q12791 1236 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 TSR1Q2NL82 804 aaKnown RBP16.19■□□□□ 0.18
CAPN3-207ENST00000397200 CCDC40Q4G0X9 1142 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 TSHZ1Q6ZSZ6 1077 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 FAM228AQ86W67 206 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 USP38Q8NB14 1042 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 BAP1Q92560 729 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 ACO2Q99798 780 aaKnown RBP16.19■□□□□ 0.18
CAPN3-207ENST00000397200 PRDM5Q9NQX1 630 aaPredicted RBP16.19■□□□□ 0.18
CAPN3-207ENST00000397200 AGPAT3Q9NRZ7 376 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 MRFAP1Q9Y605 127 aa16.19■□□□□ 0.18
CAPN3-207ENST00000397200 UMODL1Q5DID0 1318 aa16.18■□□□□ 0.18
CAPN3-207ENST00000397200 TTLL13PA6NNM8 815 aa16.18■□□□□ 0.18
CAPN3-207ENST00000397200 EIF3CLB5ME19 914 aaKnown RBP16.18■□□□□ 0.18
CAPN3-207ENST00000397200 CETN3O15182 167 aa16.18■□□□□ 0.18
CAPN3-207ENST00000397200 EPHB6O15197 1021 aa16.18■□□□□ 0.18
CAPN3-207ENST00000397200 SLC16A3O15427 465 aaKnown RBP16.18■□□□□ 0.18
CAPN3-207ENST00000397200 KIF5CO60282 957 aa16.18■□□□□ 0.18
CAPN3-207ENST00000397200 PPP2R3AQ06190 1150 aa16.18■□□□□ 0.18
CAPN3-207ENST00000397200 PAK2Q13177 524 aa16.18■□□□□ 0.18
CAPN3-207ENST00000397200 LPIN1Q14693 890 aa16.18■□□□□ 0.18
CAPN3-207ENST00000397200 ATF7IP2Q5U623 682 aa16.18■□□□□ 0.18
CAPN3-207ENST00000397200 FRMD5Q7Z6J6 570 aa16.18■□□□□ 0.18
CAPN3-207ENST00000397200 CPB2Q96IY4 423 aa16.18■□□□□ 0.18
CAPN3-207ENST00000397200 EIF3CQ99613 913 aaKnown RBP16.18■□□□□ 0.18
CAPN3-207ENST00000397200 HTATIP2Q9BUP3 242 aa16.18■□□□□ 0.18
CAPN3-207ENST00000397200 LZTFL1Q9NQ48 299 aa16.18■□□□□ 0.18
CAPN3-207ENST00000397200 ZNHIT6Q9NWK9 470 aaKnown RBP16.18■□□□□ 0.18
CAPN3-207ENST00000397200 TISP43B9A030 160 aa16.17■□□□□ 0.18
CAPN3-207ENST00000397200 ANKRD63C9JTQ0 380 aa16.17■□□□□ 0.18
CAPN3-207ENST00000397200 GPR182O15218 404 aa16.17■□□□□ 0.18
CAPN3-207ENST00000397200 CLIC2O15247 247 aa16.17■□□□□ 0.18
CAPN3-207ENST00000397200 TOM1L1O75674 476 aa16.17■□□□□ 0.18
CAPN3-207ENST00000397200 ARF4P18085 180 aaPredicted RBP16.17■□□□□ 0.18
CAPN3-207ENST00000397200 NR2F2P24468 414 aa16.17■□□□□ 0.18
CAPN3-207ENST00000397200 AXLP30530 894 aa16.17■□□□□ 0.18
CAPN3-207ENST00000397200 CD52P31358 61 aa16.17■□□□□ 0.18
CAPN3-207ENST00000397200 CYLC1P35663 651 aaPredicted RBP16.17■□□□□ 0.18
CAPN3-207ENST00000397200 MATR3P43243 847 aaKnown RBP eCLIP16.17■□□□□ 0.18
CAPN3-207ENST00000397200 NFX1Q12986 1120 aaKnown RBP16.17■□□□□ 0.18
CAPN3-207ENST00000397200 ADAM9Q13443 819 aa16.17■□□□□ 0.18
CAPN3-207ENST00000397200 ARHGAP29Q52LW3 1261 aa16.17■□□□□ 0.18
CAPN3-207ENST00000397200 SLFN12LQ6IEE8 588 aa16.17■□□□□ 0.18
CAPN3-207ENST00000397200 SLC39A4Q6P5W5 647 aa16.17■□□□□ 0.18
CAPN3-207ENST00000397200 PCMTD1Q96MG8 357 aaPredicted RBP16.17■□□□□ 0.18
CAPN3-207ENST00000397200 IRX2Q9BZI1 471 aaPredicted RBP16.17■□□□□ 0.18
CAPN3-207ENST00000397200 PDCL3Q9H2J4 239 aa16.17■□□□□ 0.18
CAPN3-207ENST00000397200 ANKFY1Q9P2R3 1169 aa16.17■□□□□ 0.18
CAPN3-207ENST00000397200 ST3GAL5Q9UNP4 418 aa16.17■□□□□ 0.18
CAPN3-207ENST00000397200 TNFSF13BQ9Y275 285 aa16.17■□□□□ 0.18
CAPN3-207ENST00000397200 KIAA0355O15063 1070 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 URI1O94763 535 aaPredicted RBP16.16■□□□□ 0.18
CAPN3-207ENST00000397200 LCA5LO95447 670 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 PARNO95453 639 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms