RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 FXR1P51114 621 aaKnown RBP eCLIP14.76□□□□□ -0.05
MCF2L-209ENST00000397036 DLG4P78352 724 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 PPP3CAQ08209 521 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 PTPN21Q16825 1174 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 CBWD6Q4V339 395 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 CBWD3Q5JTY5 395 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 CBWD5Q5RIA9 395 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 KRT39Q6A163 491 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 NOTUMQ6P988 496 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 C15orf39Q6ZRI6 1047 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 CCDC155Q8N6L0 562 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 USP38Q8NB14 1042 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 EHBP1Q8NDI1 1231 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 NEK11Q8NG66 645 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 DEFB118Q96PH6 123 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 FNBP1Q96RU3 617 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 DNAJC7Q99615 494 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 SENP6Q9GZR1 1112 aaPredicted RBP14.76□□□□□ -0.05
MCF2L-209ENST00000397036 TMEM117Q9H0C3 514 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 AGPAT5Q9NUQ2 364 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 RBAKQ9NYW8 714 aaPredicted RBP14.76□□□□□ -0.05
MCF2L-209ENST00000397036 MYO6Q9UM54 1294 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 ZKSCAN5Q9Y2L8 839 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 HTTP42858 3142 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 B4GALT4O60513 344 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 CSDE1O75534 798 aaKnown RBP14.76□□□□□ -0.05
MCF2L-209ENST00000397036 NOL4O94818 638 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 IL18RAPO95256 599 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 TRIM49P0CI25 452 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 TRIM49CP0CI26 452 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 RFX1P22670 979 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 KRT9P35527 623 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 KCNJ6P48051 423 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 MXI1P50539 228 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 TMEM62Q0P6H9 643 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 TMEM132AQ24JP5 1023 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 KLHDC7AQ5VTJ3 777 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 SLC27A1Q6PCB7 646 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 CD302Q8IX05 232 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 LMO3Q8TAP4 145 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 TMEM40Q8WWA1 233 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 SYN2Q92777 582 aaPredicted RBP14.76□□□□□ -0.05
MCF2L-209ENST00000397036 PCMTD1Q96MG8 357 aaPredicted RBP14.76□□□□□ -0.05
MCF2L-209ENST00000397036 KCNF1Q9H3M0 494 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 ASB7Q9H672 318 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 CHST12Q9NRB3 414 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 CEP72Q9P209 647 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 CDY2AQ9Y6F7 541 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 RNF225M0QZC1 329 aaPredicted RBP14.75□□□□□ -0.05
MCF2L-209ENST00000397036 SGPL1O95470 568 aa14.75□□□□□ -0.05
MCF2L-209ENST00000397036 CHRNA1P02708 482 aa14.75□□□□□ -0.05
MCF2L-209ENST00000397036 GRM5P41594 1212 aa14.75□□□□□ -0.05
MCF2L-209ENST00000397036 KLK7P49862 253 aa14.75□□□□□ -0.05
MCF2L-209ENST00000397036 CDK17Q00537 523 aa14.75□□□□□ -0.05
MCF2L-209ENST00000397036 MYL7Q01449 175 aa14.75□□□□□ -0.05
MCF2L-209ENST00000397036 ZACNQ401N2 412 aa14.75□□□□□ -0.05
MCF2L-209ENST00000397036 EPC2Q52LR7 807 aa14.75□□□□□ -0.05
MCF2L-209ENST00000397036 ZBTB41Q5SVQ8 909 aa14.75□□□□□ -0.05
MCF2L-209ENST00000397036 SV2AQ7L0J3 742 aa14.75□□□□□ -0.05
MCF2L-209ENST00000397036 ZBTB33Q86T24 672 aa14.75□□□□□ -0.05
MCF2L-209ENST00000397036 ZSCAN30Q86W11 494 aa14.75□□□□□ -0.05
MCF2L-209ENST00000397036 WDR49Q8IV35 697 aa14.75□□□□□ -0.05
MCF2L-209ENST00000397036 WNT8BQ93098 351 aa14.75□□□□□ -0.05
MCF2L-209ENST00000397036 CCDC127Q96BQ5 260 aa14.75□□□□□ -0.05
MCF2L-209ENST00000397036 TSPAN18Q96SJ8 248 aa14.75□□□□□ -0.05
MCF2L-209ENST00000397036 PPP1R16BQ96T49 567 aa14.75□□□□□ -0.05
MCF2L-209ENST00000397036 CGRRF1Q99675 332 aa14.75□□□□□ -0.05
MCF2L-209ENST00000397036 CRACR2AQ9BSW2 395 aa14.75□□□□□ -0.05
MCF2L-209ENST00000397036 GANQ9H2C0 597 aa14.75□□□□□ -0.05
MCF2L-209ENST00000397036 PLEKHA5Q9HAU0 1116 aa14.75□□□□□ -0.05
MCF2L-209ENST00000397036 FAM207AQ9NSI2 230 aaPredicted RBP14.75□□□□□ -0.05
MCF2L-209ENST00000397036 GCNT4Q9P109 453 aa14.75□□□□□ -0.05
MCF2L-209ENST00000397036 PLAGL2Q9UPG8 496 aa14.75□□□□□ -0.05
MCF2L-209ENST00000397036 NOD1Q9Y239 953 aa14.75□□□□□ -0.05
MCF2L-209ENST00000397036 GINS2Q9Y248 185 aa14.75□□□□□ -0.05
MCF2L-209ENST00000397036 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.75□□□□□ -0.05
MCF2L-209ENST00000397036 GPR182O15218 404 aa14.74□□□□□ -0.05
MCF2L-209ENST00000397036 ZC3H11AO75152 810 aaKnown RBP eCLIP14.74□□□□□ -0.05
MCF2L-209ENST00000397036 C4BPAP04003 597 aaKnown RBP14.74□□□□□ -0.05
MCF2L-209ENST00000397036 STAG3L1P0CL83 205 aa14.74□□□□□ -0.05
MCF2L-209ENST00000397036 SLC9A1P19634 815 aa14.74□□□□□ -0.05
MCF2L-209ENST00000397036 GCLMP48507 274 aa14.74□□□□□ -0.05
MCF2L-209ENST00000397036 ADKP55263 362 aaKnown RBP14.74□□□□□ -0.05
MCF2L-209ENST00000397036 CCZ1BP86790 482 aa14.74□□□□□ -0.05
MCF2L-209ENST00000397036 CCZ1P86791 482 aaPredicted RBP14.74□□□□□ -0.05
MCF2L-209ENST00000397036 MEA1Q16626 185 aa14.74□□□□□ -0.05
MCF2L-209ENST00000397036 TSR1Q2NL82 804 aaKnown RBP14.74□□□□□ -0.05
MCF2L-209ENST00000397036 C1orf53Q5VUE5 145 aa14.74□□□□□ -0.05
MCF2L-209ENST00000397036 TRIM65Q6PJ69 517 aa14.74□□□□□ -0.05
MCF2L-209ENST00000397036 NT5DC4Q86YG4 428 aa14.74□□□□□ -0.05
MCF2L-209ENST00000397036 ANKLE1Q8NAG6 615 aa14.74□□□□□ -0.05
MCF2L-209ENST00000397036 CPLX3Q8WVH0 158 aa14.74□□□□□ -0.05
MCF2L-209ENST00000397036 BAP1Q92560 729 aa14.74□□□□□ -0.05
MCF2L-209ENST00000397036 DHX38Q92620 1227 aaKnown RBP14.74□□□□□ -0.05
MCF2L-209ENST00000397036 CPB2Q96IY4 423 aa14.74□□□□□ -0.05
MCF2L-209ENST00000397036 FAM81BQ96LP2 452 aa14.74□□□□□ -0.05
MCF2L-209ENST00000397036 TRAIPQ9BWF2 469 aa14.74□□□□□ -0.05
MCF2L-209ENST00000397036 LSM14BQ9BX40 385 aaKnown RBP14.74□□□□□ -0.05
MCF2L-209ENST00000397036 RPF1Q9H9Y2 349 aaKnown RBP14.74□□□□□ -0.05
MCF2L-209ENST00000397036 PDE11AQ9HCR9 933 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms