RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 CCDC38Q502W7 563 aa16.84■□□□□ 0.29
HOXA3-202ENST00000396352 EXOC3L1Q86VI1 746 aa16.84■□□□□ 0.29
HOXA3-202ENST00000396352 CBWD2Q8IUF1 395 aa16.84■□□□□ 0.29
HOXA3-202ENST00000396352 ANKS4BQ8N8V4 417 aa16.84■□□□□ 0.29
HOXA3-202ENST00000396352 HELQQ8TDG4 1101 aa16.84■□□□□ 0.29
HOXA3-202ENST00000396352 DDX1Q92499 740 aaKnown RBP16.84■□□□□ 0.29
HOXA3-202ENST00000396352 DDX23Q9BUQ8 820 aaKnown RBP16.84■□□□□ 0.29
HOXA3-202ENST00000396352 TAOK3Q9H2K8 898 aa16.84■□□□□ 0.29
HOXA3-202ENST00000396352 UVRAGQ9P2Y5 699 aa16.84■□□□□ 0.29
HOXA3-202ENST00000396352 TPX2Q9ULW0 747 aaKnown RBP16.84■□□□□ 0.29
HOXA3-202ENST00000396352 TMEM150BA6NC51 233 aa16.84■□□□□ 0.29
HOXA3-202ENST00000396352 TCP10L2B9ZVM9 353 aa16.84■□□□□ 0.29
HOXA3-202ENST00000396352 ECEL1O95672 775 aa16.84■□□□□ 0.29
HOXA3-202ENST00000396352 ADSSP30520 456 aa16.84■□□□□ 0.29
HOXA3-202ENST00000396352 MFAP3P55082 362 aa16.84■□□□□ 0.29
HOXA3-202ENST00000396352 CDR2Q01850 454 aa16.84■□□□□ 0.29
HOXA3-202ENST00000396352 NSMFQ6X4W1 530 aa16.84■□□□□ 0.29
HOXA3-202ENST00000396352 STMN4Q9H169 189 aaPredicted RBP16.84■□□□□ 0.29
HOXA3-202ENST00000396352 CDC42EP4Q9H3Q1 356 aaKnown RBP16.84■□□□□ 0.29
HOXA3-202ENST00000396352 GPRC5CQ9NQ84 441 aa16.84■□□□□ 0.29
HOXA3-202ENST00000396352 SLC16A4O15374 487 aa16.83■□□□□ 0.29
HOXA3-202ENST00000396352 CLDN3O15551 220 aa16.83■□□□□ 0.29
HOXA3-202ENST00000396352 MGRN1O60291 552 aa16.83■□□□□ 0.29
HOXA3-202ENST00000396352 GRIN3BO60391 1043 aa16.83■□□□□ 0.29
HOXA3-202ENST00000396352 NCKAP1LP55160 1127 aa16.83■□□□□ 0.29
HOXA3-202ENST00000396352 IRX3P78415 501 aaPredicted RBP16.83■□□□□ 0.29
HOXA3-202ENST00000396352 PREPLQ4J6C6 727 aaPredicted RBP16.83■□□□□ 0.29
HOXA3-202ENST00000396352 SAMD1Q6SPF0 538 aaPredicted RBP16.83■□□□□ 0.29
HOXA3-202ENST00000396352 FSCN2O14926 492 aa16.83■□□□□ 0.28
HOXA3-202ENST00000396352 SF3A3Q12874 501 aaKnown RBP eCLIP16.83■□□□□ 0.289e-11■■□□□ 14.1
HOXA3-202ENST00000396352 MKRN4PQ13434 485 aaPredicted RBP16.83■□□□□ 0.28
HOXA3-202ENST00000396352 SNRNP35Q16560 246 aaKnown RBP16.83■□□□□ 0.28
HOXA3-202ENST00000396352 TBC1D10BQ4KMP7 808 aaPredicted RBP16.83■□□□□ 0.28
HOXA3-202ENST00000396352 WLSQ5T9L3 541 aa16.83■□□□□ 0.28
HOXA3-202ENST00000396352 RHBDF2Q6PJF5 856 aa16.83■□□□□ 0.28
HOXA3-202ENST00000396352 TRMT10CQ7L0Y3 403 aaKnown RBP16.83■□□□□ 0.28
HOXA3-202ENST00000396352 CCDC25Q86WR0 208 aa16.83■□□□□ 0.28
HOXA3-202ENST00000396352 ELAC2Q9BQ52 826 aaKnown RBP16.83■□□□□ 0.28
HOXA3-202ENST00000396352 ROPN1BQ9BZX4 212 aaPredicted RBP16.83■□□□□ 0.28
HOXA3-202ENST00000396352 ROPN1Q9HAT0 212 aaPredicted RBP16.83■□□□□ 0.28
HOXA3-202ENST00000396352 AFF2P51816 1311 aa16.83■□□□□ 0.28
HOXA3-202ENST00000396352 PSME4Q14997 1843 aa16.83■□□□□ 0.28
HOXA3-202ENST00000396352 BRWD3Q6RI45 1802 aa16.83■□□□□ 0.28
HOXA3-202ENST00000396352 IFNAR2P48551 515 aa16.83■□□□□ 0.28
HOXA3-202ENST00000396352 SNRPFP62306 86 aaKnown RBP16.83■□□□□ 0.28
HOXA3-202ENST00000396352 UGCGQ16739 394 aa16.83■□□□□ 0.28
HOXA3-202ENST00000396352 LONRF1Q17RB8 773 aa16.83■□□□□ 0.28
HOXA3-202ENST00000396352 AGBL1Q96MI9 1066 aa16.83■□□□□ 0.28
HOXA3-202ENST00000396352 MYCBPQ99417 103 aaPredicted RBP16.83■□□□□ 0.28
HOXA3-202ENST00000396352 AGO4Q9HCK5 861 aaKnown RBP16.83■□□□□ 0.28
HOXA3-202ENST00000396352 WHRNQ9P202 907 aa16.83■□□□□ 0.28
HOXA3-202ENST00000396352 COQ4Q9Y3A0 265 aa16.83■□□□□ 0.28
HOXA3-202ENST00000396352 LYPLA2O95372 231 aa16.82■□□□□ 0.28
HOXA3-202ENST00000396352 OAS1P00973 400 aaKnown RBP16.82■□□□□ 0.28
HOXA3-202ENST00000396352 QARSP47897 775 aaKnown RBP16.82■□□□□ 0.28
HOXA3-202ENST00000396352 KRT17Q04695 432 aa16.82■□□□□ 0.28
HOXA3-202ENST00000396352 PPP1R7Q15435 360 aa16.82■□□□□ 0.28
HOXA3-202ENST00000396352 TAOK1Q7L7X3 1001 aa16.82■□□□□ 0.28
HOXA3-202ENST00000396352 FAM160B2Q86V87 743 aa16.82■□□□□ 0.28
HOXA3-202ENST00000396352 C1orf54Q8WWF1 131 aa16.82■□□□□ 0.28
HOXA3-202ENST00000396352 SAMD15Q9P1V8 674 aa16.82■□□□□ 0.28
HOXA3-202ENST00000396352 ZNF219Q9P2Y4 722 aaPredicted RBP16.82■□□□□ 0.28
HOXA3-202ENST00000396352 GSTA1P08263 222 aa16.82■□□□□ 0.28
HOXA3-202ENST00000396352 YWHABP31946 246 aaKnown RBP16.82■□□□□ 0.28
HOXA3-202ENST00000396352 MAP2K2P36507 400 aa16.82■□□□□ 0.28
HOXA3-202ENST00000396352 GPC3P51654 580 aa16.82■□□□□ 0.28
HOXA3-202ENST00000396352 PEX3P56589 373 aa16.82■□□□□ 0.28
HOXA3-202ENST00000396352 CALCOCO2Q13137 446 aa16.82■□□□□ 0.28
HOXA3-202ENST00000396352 LLGL1Q15334 1064 aa16.82■□□□□ 0.28
HOXA3-202ENST00000396352 MAGEC3Q8TD91 643 aa16.82■□□□□ 0.28
HOXA3-202ENST00000396352 GLIS2Q9BZE0 524 aaPredicted RBP16.82■□□□□ 0.28
HOXA3-202ENST00000396352 ZNF536O15090 1300 aa16.82■□□□□ 0.28
HOXA3-202ENST00000396352 ASTN2O75129 1339 aaPredicted RBP16.82■□□□□ 0.28
HOXA3-202ENST00000396352 VIMP08670 466 aaKnown RBP16.81■□□□□ 0.28
HOXA3-202ENST00000396352 CHKAP35790 457 aa16.81■□□□□ 0.28
HOXA3-202ENST00000396352 PDE6CP51160 858 aa16.81■□□□□ 0.28
HOXA3-202ENST00000396352 ELF3P78545 371 aaPredicted RBP16.81■□□□□ 0.28
HOXA3-202ENST00000396352 TKFCQ3LXA3 575 aa16.81■□□□□ 0.28
HOXA3-202ENST00000396352 KRT39Q6A163 491 aa16.81■□□□□ 0.28
HOXA3-202ENST00000396352 NIPA1Q7RTP0 329 aa16.81■□□□□ 0.28
HOXA3-202ENST00000396352 CCDC50Q8IVM0 306 aa16.81■□□□□ 0.28
HOXA3-202ENST00000396352 PARD3BQ8TEW8 1205 aa16.81■□□□□ 0.28
HOXA3-202ENST00000396352 DHX38Q92620 1227 aaKnown RBP16.81■□□□□ 0.28
HOXA3-202ENST00000396352 SAAL1Q96ER3 474 aa16.81■□□□□ 0.28
HOXA3-202ENST00000396352 CCDC113Q9H0I3 377 aa16.81■□□□□ 0.28
HOXA3-202ENST00000396352 CNTNAP1P78357 1384 aa16.81■□□□□ 0.28
HOXA3-202ENST00000396352 YDJCA8MPS7 323 aa16.81■□□□□ 0.28
HOXA3-202ENST00000396352 NFIBO00712 420 aa16.81■□□□□ 0.28
HOXA3-202ENST00000396352 IVDP26440 423 aa16.81■□□□□ 0.28
HOXA3-202ENST00000396352 ACAD10Q6JQN1 1059 aa16.81■□□□□ 0.28
HOXA3-202ENST00000396352 ELMO3Q96BJ8 720 aa16.81■□□□□ 0.28
HOXA3-202ENST00000396352 CCDC127Q96BQ5 260 aa16.81■□□□□ 0.28
HOXA3-202ENST00000396352 TOPORSQ9NS56 1045 aaPredicted RBP16.81■□□□□ 0.28
HOXA3-202ENST00000396352 FEM1BQ9UK73 627 aa16.81■□□□□ 0.28
HOXA3-202ENST00000396352 UBIAD1Q9Y5Z9 338 aa16.81■□□□□ 0.28
HOXA3-202ENST00000396352 CLRN2A0PK11 232 aa16.81■□□□□ 0.28
HOXA3-202ENST00000396352 ACSL3O95573 720 aa16.81■□□□□ 0.28
HOXA3-202ENST00000396352 RDXP35241 583 aaKnown RBP16.81■□□□□ 0.28
HOXA3-202ENST00000396352 MRPS9P82933 396 aaKnown RBP16.81■□□□□ 0.28
HOXA3-202ENST00000396352 SGO2Q562F6 1265 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms