RNA–Protein interactions for RNA: ENST00000396344.4

HOXA10-202, Transcript of homeobox A10, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HOXA10, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10-202ENST00000396344 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.32■□□□□ 0.52
HOXA10-202ENST00000396344 SIX2Q9NPC8 291 aa18.32■□□□□ 0.52
HOXA10-202ENST00000396344 TMEM39AQ9NV64 488 aa18.32■□□□□ 0.52
HOXA10-202ENST00000396344 APEX2Q9UBZ4 518 aa18.32■□□□□ 0.52
HOXA10-202ENST00000396344 TBX21Q9UL17 535 aa18.32■□□□□ 0.52
HOXA10-202ENST00000396344 INTUQ9ULD6 942 aa18.32■□□□□ 0.52
HOXA10-202ENST00000396344 IGKV6D-21A0A0A0MT36 114 aa18.31■□□□□ 0.52
HOXA10-202ENST00000396344 MACROD2A1Z1Q3 448 aa18.31■□□□□ 0.52
HOXA10-202ENST00000396344 STBD1O95210 358 aa18.31■□□□□ 0.52
HOXA10-202ENST00000396344 PRLRP16471 622 aa18.31■□□□□ 0.52
HOXA10-202ENST00000396344 TCP1P17987 556 aaKnown RBP18.31■□□□□ 0.52
HOXA10-202ENST00000396344 UBA1P22314 1058 aaKnown RBP18.31■□□□□ 0.52
HOXA10-202ENST00000396344 MCM3P25205 808 aa18.31■□□□□ 0.52
HOXA10-202ENST00000396344 STRN3Q13033 797 aa18.31■□□□□ 0.52
HOXA10-202ENST00000396344 ITGA7Q13683 1181 aa18.31■□□□□ 0.52
HOXA10-202ENST00000396344 BMS1Q14692 1282 aaKnown RBP18.31■□□□□ 0.52
HOXA10-202ENST00000396344 EMC2Q15006 297 aa18.31■□□□□ 0.52
HOXA10-202ENST00000396344 TMEM63BQ5T3F8 832 aa18.31■□□□□ 0.52
HOXA10-202ENST00000396344 METTL7BQ6UX53 244 aa18.31■□□□□ 0.52
HOXA10-202ENST00000396344 SEPT14Q6ZU15 432 aa18.31■□□□□ 0.52
HOXA10-202ENST00000396344 CYFIP1Q7L576 1253 aa18.31■□□□□ 0.52
HOXA10-202ENST00000396344 KSR1Q8IVT5 923 aa18.31■□□□□ 0.52
HOXA10-202ENST00000396344 FAM126BQ8IXS8 530 aa18.31■□□□□ 0.52
HOXA10-202ENST00000396344 AFAP1L1Q8TED9 768 aa18.31■□□□□ 0.52
HOXA10-202ENST00000396344 SLC7A3Q8WY07 619 aa18.31■□□□□ 0.52
HOXA10-202ENST00000396344 NIFKQ9BYG3 293 aaKnown RBP18.31■□□□□ 0.52
HOXA10-202ENST00000396344 LACRTQ9GZZ8 138 aa18.31■□□□□ 0.52
HOXA10-202ENST00000396344 TRIM10Q9UDY6 481 aa18.31■□□□□ 0.52
HOXA10-202ENST00000396344 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.31■□□□□ 0.52
HOXA10-202ENST00000396344 V9GYY5 206 aaPredicted RBP18.31■□□□□ 0.52
HOXA10-202ENST00000396344 RAG1P15918 1043 aa18.3■□□□□ 0.52
HOXA10-202ENST00000396344 H2AFXP16104 143 aaPredicted RBP18.3■□□□□ 0.52
HOXA10-202ENST00000396344 SOX5P35711 763 aa18.3■□□□□ 0.52
HOXA10-202ENST00000396344 NAMPTP43490 491 aa18.3■□□□□ 0.52
HOXA10-202ENST00000396344 GFPT1Q06210 699 aaPredicted RBP18.3■□□□□ 0.52
HOXA10-202ENST00000396344 CCDC70Q6NSX1 233 aa18.3■□□□□ 0.52
HOXA10-202ENST00000396344 DPY19L2P1Q6NXN4 242 aa18.3■□□□□ 0.52
HOXA10-202ENST00000396344 TMC2Q8TDI7 906 aa18.3■□□□□ 0.52
HOXA10-202ENST00000396344 CALR3Q96L12 384 aaKnown RBP18.3■□□□□ 0.52
HOXA10-202ENST00000396344 JPH2Q9BR39 696 aaPredicted RBP18.3■□□□□ 0.52
HOXA10-202ENST00000396344 POLR3FQ9H1D9 316 aaPredicted RBP18.3■□□□□ 0.52
HOXA10-202ENST00000396344 BCAS3Q9H6U6 928 aa18.3■□□□□ 0.52
HOXA10-202ENST00000396344 GPRC5CQ9NQ84 441 aa18.3■□□□□ 0.52
HOXA10-202ENST00000396344 USP20Q9Y2K6 914 aa18.3■□□□□ 0.52
HOXA10-202ENST00000396344 SCN10AQ9Y5Y9 1956 aa18.3■□□□□ 0.52
HOXA10-202ENST00000396344 GH1P01241 217 aa18.3■□□□□ 0.52
HOXA10-202ENST00000396344 CD4P01730 458 aa18.3■□□□□ 0.52
HOXA10-202ENST00000396344 ACTN1P12814 892 aa18.3■□□□□ 0.52
HOXA10-202ENST00000396344 MXI1P50539 228 aa18.3■□□□□ 0.52
HOXA10-202ENST00000396344 PURAQ00577 322 aaKnown RBP18.3■□□□□ 0.52
HOXA10-202ENST00000396344 SP4Q02446 784 aa18.3■□□□□ 0.52
HOXA10-202ENST00000396344 MTERF2Q49AM1 385 aa18.3■□□□□ 0.52
HOXA10-202ENST00000396344 BADQ92934 168 aa18.3■□□□□ 0.52
HOXA10-202ENST00000396344 EMID1Q96A84 441 aaPredicted RBP18.3■□□□□ 0.52
HOXA10-202ENST00000396344 MTG1Q9BT17 334 aaPredicted RBP18.3■□□□□ 0.52
HOXA10-202ENST00000396344 CCDC94Q9BW85 323 aaPredicted RBP18.3■□□□□ 0.52
HOXA10-202ENST00000396344 AZI2Q9H6S1 392 aa18.3■□□□□ 0.52
HOXA10-202ENST00000396344 ARHGAP28Q9P2N2 729 aa18.3■□□□□ 0.52
HOXA10-202ENST00000396344 HYOU1Q9Y4L1 999 aa18.3■□□□□ 0.52
HOXA10-202ENST00000396344 F8VZ95 297 aa18.29■□□□□ 0.52
HOXA10-202ENST00000396344 ARIH2O95376 493 aa18.29■□□□□ 0.52
HOXA10-202ENST00000396344 TIMP1P01033 207 aa18.29■□□□□ 0.52
HOXA10-202ENST00000396344 TRIM49P0CI25 452 aa18.29■□□□□ 0.52
HOXA10-202ENST00000396344 TRIM49CP0CI26 452 aa18.29■□□□□ 0.52
HOXA10-202ENST00000396344 SLC26A2P50443 739 aa18.29■□□□□ 0.52
HOXA10-202ENST00000396344 NAB2Q15742 525 aa18.29■□□□□ 0.52
HOXA10-202ENST00000396344 SLFN12LQ6IEE8 588 aa18.29■□□□□ 0.52
HOXA10-202ENST00000396344 TMCO3Q6UWJ1 677 aa18.29■□□□□ 0.52
HOXA10-202ENST00000396344 IRF2BP2Q7Z5L9 587 aa18.29■□□□□ 0.52
HOXA10-202ENST00000396344 CAGE1Q8TC20 777 aa18.29■□□□□ 0.52
HOXA10-202ENST00000396344 SEPT1Q8WYJ6 367 aa18.29■□□□□ 0.52
HOXA10-202ENST00000396344 BICD1Q96G01 975 aa18.29■□□□□ 0.52
HOXA10-202ENST00000396344 CBWD1Q9BRT8 395 aa18.29■□□□□ 0.52
HOXA10-202ENST00000396344 DHX33Q9H6R0 707 aaKnown RBP18.29■□□□□ 0.52
HOXA10-202ENST00000396344 MLXIPQ9HAP2 919 aa18.29■□□□□ 0.52
HOXA10-202ENST00000396344 RNF14Q9UBS8 474 aa18.29■□□□□ 0.52
HOXA10-202ENST00000396344 DDX41Q9UJV9 622 aaKnown RBP18.29■□□□□ 0.52
HOXA10-202ENST00000396344 DNAJC12Q9UKB3 198 aa18.29■□□□□ 0.52
HOXA10-202ENST00000396344 EMSYQ7Z589 1322 aa18.28■□□□□ 0.52
HOXA10-202ENST00000396344 TMEM150BA6NC51 233 aa18.28■□□□□ 0.52
HOXA10-202ENST00000396344 RCCD1A6NED2 376 aa18.28■□□□□ 0.52
HOXA10-202ENST00000396344 HNRNPDLO14979 420 aaKnown RBP18.28■□□□□ 0.52
HOXA10-202ENST00000396344 ARID5AQ03989 594 aa18.28■□□□□ 0.52
HOXA10-202ENST00000396344 SNRNP35Q16560 246 aaKnown RBP18.28■□□□□ 0.52
HOXA10-202ENST00000396344 GPD1LQ8N335 351 aa18.28■□□□□ 0.52
HOXA10-202ENST00000396344 DEPTORQ8TB45 409 aa18.28■□□□□ 0.52
HOXA10-202ENST00000396344 TCP11Q8WWU5 503 aa18.28■□□□□ 0.52
HOXA10-202ENST00000396344 POMGNT1Q8WZA1 660 aa18.28■□□□□ 0.52
HOXA10-202ENST00000396344 GRIN2DO15399 1336 aa18.27■□□□□ 0.52
HOXA10-202ENST00000396344 A0A0A6YYK5 440 aaPredicted RBP18.27■□□□□ 0.52
HOXA10-202ENST00000396344 ATP8B1O43520 1251 aa18.27■□□□□ 0.52
HOXA10-202ENST00000396344 ERLIN1O75477 346 aa18.27■□□□□ 0.52
HOXA10-202ENST00000396344 ATP1A1P05023 1023 aaKnown RBP18.27■□□□□ 0.52
HOXA10-202ENST00000396344 LIG4P49917 911 aa18.27■□□□□ 0.52
HOXA10-202ENST00000396344 STAT5BP51692 787 aa18.27■□□□□ 0.52
HOXA10-202ENST00000396344 NAP1L1P55209 391 aaKnown RBP18.27■□□□□ 0.52
HOXA10-202ENST00000396344 PTK2Q05397 1052 aa18.27■□□□□ 0.52
HOXA10-202ENST00000396344 PTPN11Q06124 597 aaPredicted RBP18.27■□□□□ 0.52
HOXA10-202ENST00000396344 ARHGAP1Q07960 439 aa18.27■□□□□ 0.52
HOXA10-202ENST00000396344 NAA30Q147X3 362 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms