RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 FMO5P49326 533 aa16.73■□□□□ 0.27
VAMP1-202ENST00000396308 MXI1P50539 228 aa16.73■□□□□ 0.27
VAMP1-202ENST00000396308 AP3M2P53677 418 aa16.73■□□□□ 0.27
VAMP1-202ENST00000396308 YARSP54577 528 aaKnown RBP16.73■□□□□ 0.27
VAMP1-202ENST00000396308 POU5F1Q01860 360 aaKnown RBP16.73■□□□□ 0.27
VAMP1-202ENST00000396308 EEF1DP3Q658K8 133 aa16.73■□□□□ 0.27
VAMP1-202ENST00000396308 BRSK2Q8IWQ3 736 aa16.73■□□□□ 0.27
VAMP1-202ENST00000396308 THNSL1Q8IYQ7 743 aa16.73■□□□□ 0.27
VAMP1-202ENST00000396308 ZNF397Q8NF99 534 aaPredicted RBP16.73■□□□□ 0.27
VAMP1-202ENST00000396308 BORCS6Q96GS4 357 aa16.73■□□□□ 0.27
VAMP1-202ENST00000396308 CDHR5Q9HBB8 845 aa16.73■□□□□ 0.27
VAMP1-202ENST00000396308 PTPRHQ9HD43 1115 aa16.73■□□□□ 0.27
VAMP1-202ENST00000396308 SQORQ9Y6N5 450 aa16.73■□□□□ 0.27
VAMP1-202ENST00000396308 TTLL13PA6NNM8 815 aa16.72■□□□□ 0.27
VAMP1-202ENST00000396308 PQBP1O60828 265 aaKnown RBP16.72■□□□□ 0.27
VAMP1-202ENST00000396308 NPTXRO95502 500 aa16.72■□□□□ 0.27
VAMP1-202ENST00000396308 TNNI1P19237 187 aa16.72■□□□□ 0.27
VAMP1-202ENST00000396308 PBX1P40424 430 aa16.72■□□□□ 0.27
VAMP1-202ENST00000396308 MGAT3Q09327 533 aa16.72■□□□□ 0.27
VAMP1-202ENST00000396308 EXOC3L4Q17RC7 722 aa16.72■□□□□ 0.27
VAMP1-202ENST00000396308 TSR1Q2NL82 804 aaKnown RBP16.72■□□□□ 0.27
VAMP1-202ENST00000396308 FAM26DQ5JW98 314 aa16.72■□□□□ 0.27
VAMP1-202ENST00000396308 TWF2Q6IBS0 349 aaKnown RBP16.72■□□□□ 0.27
VAMP1-202ENST00000396308 CNGA4Q8IV77 575 aa16.72■□□□□ 0.27
VAMP1-202ENST00000396308 FAM126BQ8IXS8 530 aa16.72■□□□□ 0.27
VAMP1-202ENST00000396308 PARD3BQ8TEW8 1205 aa16.72■□□□□ 0.27
VAMP1-202ENST00000396308 CGRRF1Q99675 332 aa16.72■□□□□ 0.27
VAMP1-202ENST00000396308 C11orf49Q9H6J7 331 aa16.72■□□□□ 0.27
VAMP1-202ENST00000396308 CHST12Q9NRB3 414 aa16.72■□□□□ 0.27
VAMP1-202ENST00000396308 TOPORSQ9NS56 1045 aaPredicted RBP16.72■□□□□ 0.27
VAMP1-202ENST00000396308 GCNT4Q9P109 453 aa16.72■□□□□ 0.27
VAMP1-202ENST00000396308 PCDH10Q9P2E7 1040 aa16.72■□□□□ 0.27
VAMP1-202ENST00000396308 ABLIM1O14639 778 aa16.71■□□□□ 0.27
VAMP1-202ENST00000396308 CHRNA1P02708 482 aa16.71■□□□□ 0.27
VAMP1-202ENST00000396308 CKBP12277 381 aa16.71■□□□□ 0.27
VAMP1-202ENST00000396308 ZSCAN20P17040 1043 aaPredicted RBP16.71■□□□□ 0.27
VAMP1-202ENST00000396308 CDK7P50613 346 aa16.71■□□□□ 0.27
VAMP1-202ENST00000396308 RBL2Q08999 1139 aa16.71■□□□□ 0.27
VAMP1-202ENST00000396308 NFX1Q12986 1120 aaKnown RBP16.71■□□□□ 0.27
VAMP1-202ENST00000396308 KRT39Q6A163 491 aa16.71■□□□□ 0.27
VAMP1-202ENST00000396308 SLC39A5Q6ZMH5 540 aa16.71■□□□□ 0.27
VAMP1-202ENST00000396308 FAM43BQ6ZT52 329 aaPredicted RBP16.71■□□□□ 0.27
VAMP1-202ENST00000396308 FAM228AQ86W67 206 aa16.71■□□□□ 0.27
VAMP1-202ENST00000396308 CDR2LQ86X02 465 aaPredicted RBP16.71■□□□□ 0.27
VAMP1-202ENST00000396308 WDR49Q8IV35 697 aa16.71■□□□□ 0.27
VAMP1-202ENST00000396308 TMEM40Q8WWA1 233 aa16.71■□□□□ 0.27
VAMP1-202ENST00000396308 DHX38Q92620 1227 aaKnown RBP16.71■□□□□ 0.27
VAMP1-202ENST00000396308 WNT8BQ93098 351 aa16.71■□□□□ 0.27
VAMP1-202ENST00000396308 FAM212AQ96EL1 285 aa16.71■□□□□ 0.27
VAMP1-202ENST00000396308 ACAP3Q96P50 834 aa16.71■□□□□ 0.27
VAMP1-202ENST00000396308 HAPLN2Q9GZV7 340 aa16.71■□□□□ 0.27
VAMP1-202ENST00000396308 TMEM8AQ9HCN3 771 aa16.71■□□□□ 0.27
VAMP1-202ENST00000396308 CPSF3Q9UKF6 684 aaKnown RBP16.71■□□□□ 0.27
VAMP1-202ENST00000396308 NOC2LQ9Y3T9 749 aaKnown RBP16.71■□□□□ 0.27
VAMP1-202ENST00000396308 DAAM1Q9Y4D1 1078 aa16.71■□□□□ 0.27
VAMP1-202ENST00000396308 PDCD11Q14690 1871 aaKnown RBP16.7■□□□□ 0.26
VAMP1-202ENST00000396308 LRRIQ3A6PVS8 624 aaPredicted RBP16.7■□□□□ 0.26
VAMP1-202ENST00000396308 CLSTN1O94985 981 aa16.7■□□□□ 0.26
VAMP1-202ENST00000396308 TNNC2P02585 160 aa16.7■□□□□ 0.26
VAMP1-202ENST00000396308 STAG3L1P0CL83 205 aa16.7■□□□□ 0.26
VAMP1-202ENST00000396308 GHRP10912 638 aa16.7■□□□□ 0.26
VAMP1-202ENST00000396308 SELPP16109 830 aa16.7■□□□□ 0.26
VAMP1-202ENST00000396308 GRM5P41594 1212 aa16.7■□□□□ 0.26
VAMP1-202ENST00000396308 ATN1P54259 1190 aaPredicted RBP16.7■□□□□ 0.26
VAMP1-202ENST00000396308 OSTNP61366 133 aa16.7■□□□□ 0.26
VAMP1-202ENST00000396308 TRIM71Q2Q1W2 868 aaKnown RBP16.7■□□□□ 0.26
VAMP1-202ENST00000396308 FIGNQ5HY92 759 aa16.7■□□□□ 0.26
VAMP1-202ENST00000396308 FBXO47Q5MNV8 452 aa16.7■□□□□ 0.26
VAMP1-202ENST00000396308 ZNF618Q5T7W0 954 aa16.7■□□□□ 0.26
VAMP1-202ENST00000396308 LRRC8DQ7L1W4 858 aa16.7■□□□□ 0.26
VAMP1-202ENST00000396308 CCDC186Q7Z3E2 898 aa16.7■□□□□ 0.26
VAMP1-202ENST00000396308 CACNA2D4Q7Z3S7 1137 aa16.7■□□□□ 0.26
VAMP1-202ENST00000396308 CD302Q8IX05 232 aa16.7■□□□□ 0.26
VAMP1-202ENST00000396308 ZSWIM2Q8NEG5 633 aa16.7■□□□□ 0.26
VAMP1-202ENST00000396308 LSM14BQ9BX40 385 aaKnown RBP16.7■□□□□ 0.26
VAMP1-202ENST00000396308 MCOLN1Q9GZU1 580 aa16.7■□□□□ 0.26
VAMP1-202ENST00000396308 ST3GAL5Q9UNP4 418 aa16.7■□□□□ 0.26
VAMP1-202ENST00000396308 AKR1B15C9JRZ8 316 aaPredicted RBP16.69■□□□□ 0.26
VAMP1-202ENST00000396308 PITPNM1O00562 1244 aa16.69■□□□□ 0.26
VAMP1-202ENST00000396308 PHACTR2O75167 634 aa16.69■□□□□ 0.26
VAMP1-202ENST00000396308 PARNO95453 639 aaKnown RBP16.69■□□□□ 0.26
VAMP1-202ENST00000396308 TMEM191BP0C7N4 346 aa16.69■□□□□ 0.26
VAMP1-202ENST00000396308 SKIP12755 728 aa16.69■□□□□ 0.26
VAMP1-202ENST00000396308 RFX1P22670 979 aa16.69■□□□□ 0.26
VAMP1-202ENST00000396308 TNFSF9P41273 254 aa16.69■□□□□ 0.26
VAMP1-202ENST00000396308 GCLMP48507 274 aa16.69■□□□□ 0.26
VAMP1-202ENST00000396308 RAB27AP51159 221 aa16.69■□□□□ 0.26
VAMP1-202ENST00000396308 BIRC3Q13489 604 aa16.69■□□□□ 0.26
VAMP1-202ENST00000396308 SEZ6Q53EL9 994 aa16.69■□□□□ 0.26
VAMP1-202ENST00000396308 HS1BP3Q53T59 392 aa16.69■□□□□ 0.26
VAMP1-202ENST00000396308 C1orf53Q5VUE5 145 aa16.69■□□□□ 0.26
VAMP1-202ENST00000396308 CRELD2Q6UXH1 353 aaPredicted RBP16.69■□□□□ 0.26
VAMP1-202ENST00000396308 ANKRD33Q7Z3H0 272 aa16.69■□□□□ 0.26
VAMP1-202ENST00000396308 NECAB2Q7Z6G3 386 aa16.69■□□□□ 0.26
VAMP1-202ENST00000396308 CACTINQ8WUQ7 758 aaKnown RBP16.69■□□□□ 0.26
VAMP1-202ENST00000396308 ANKRD36BP1Q96IX9 119 aa16.69■□□□□ 0.26
VAMP1-202ENST00000396308 TOX2Q96NM4 488 aa16.69■□□□□ 0.26
VAMP1-202ENST00000396308 IMPG2Q9BZV3 1241 aa16.69■□□□□ 0.26
VAMP1-202ENST00000396308 PDE11AQ9HCR9 933 aa16.69■□□□□ 0.26
VAMP1-202ENST00000396308 FAM207AQ9NSI2 230 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms