RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 CCT8L2Q96SF2 557 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 NOC4LQ9BVI4 516 aaKnown RBP5.79□□□□□ -1.48
VPS41-203ENST00000395969 FGFBP2Q9BYJ0 223 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 JPH1Q9HDC5 661 aaPredicted RBP5.79□□□□□ -1.48
VPS41-203ENST00000395969 BTBD7Q9P203 1132 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 CPSF2Q9P2I0 782 aaKnown RBP5.79□□□□□ -1.48
VPS41-203ENST00000395969 RBPJLQ9UBG7 517 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 PASKQ96RG2 1323 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 EME2A4GXA9 379 aaPredicted RBP5.78□□□□□ -1.48
VPS41-203ENST00000395969 ASB14A6NK59 587 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 PON1P27169 355 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 CDR1P51861 262 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 GTF2A2P52657 109 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 APBA1Q02410 837 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 SNAPC2Q13487 334 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 SLC18A3Q16572 532 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 TBC1D10BQ4KMP7 808 aaPredicted RBP5.78□□□□□ -1.48
VPS41-203ENST00000395969 IQCEQ6IPM2 695 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 MIGA2Q7L4E1 593 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 NLRP14Q86W24 1093 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 ZNF677Q86XU0 584 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 SMYD4Q8IYR2 804 aaPredicted RBP5.78□□□□□ -1.48
VPS41-203ENST00000395969 IQCKQ8N0W5 287 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 NLRP7Q8WX94 980 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 PHF12Q96QT6 1004 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 PCYT2Q99447 389 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 SH3GL3Q99963 347 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 EBF2Q9HAK2 575 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 PTPRHQ9HD43 1115 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 ETAA1Q9NY74 926 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 SLC9A2Q9UBY0 812 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 TMEM59LQ9UK28 342 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 GUCA1BQ9UMX6 200 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 GSTTP1A0A1W2PQM5 241 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 TLR2O60603 784 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 AKAP3O75969 853 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 MYBP10242 640 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 CETPP11597 493 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 ATP4AP20648 1035 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 HOXA13P31271 388 aaPredicted RBP5.78□□□□□ -1.48
VPS41-203ENST00000395969 GCNT1Q02742 428 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 BAATQ14032 418 aaPredicted RBP5.78□□□□□ -1.48
VPS41-203ENST00000395969 PSMD6Q15008 389 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 NAB2Q15742 525 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 SLC4A8Q2Y0W8 1093 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 CELF3Q5SZQ8 465 aaKnown RBP5.78□□□□□ -1.48
VPS41-203ENST00000395969 MORN1Q5T089 497 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 DPY19L2Q6NUT2 758 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 NT5DC4Q86YG4 428 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 CREG2Q8IUH2 290 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 ZBTB10Q96DT7 871 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 SCLT1Q96NL6 688 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 ZIM3Q96PE6 472 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 OSBPL7Q9BZF2 842 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 FAM129AQ9BZQ8 928 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 BHMT2Q9H2M3 363 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 RAVER2Q9HCJ3 691 aaKnown RBP5.78□□□□□ -1.48
VPS41-203ENST00000395969 SLC39A2Q9NP94 309 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 XPNPEP1Q9NQW7 623 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 ARHGAP20Q9P2F6 1191 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 STXBP5LQ9Y2K9 1186 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 FARP1Q9Y4F1 1045 aaPredicted RBP5.78□□□□□ -1.48
VPS41-203ENST00000395969 CSADQ9Y600 493 aa5.78□□□□□ -1.48
VPS41-203ENST00000395969 GOLGA6L7A0A1B0GV03 622 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 DNM1LO00429 736 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 MAP3K13O43283 966 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 CREB3O43889 395 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 SH3BP5O60239 455 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 ZNF862O60290 1169 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 HSF2BPO75031 334 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 HIP1RO75146 1068 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 TBCAO75347 108 aaKnown RBP5.77□□□□□ -1.49
VPS41-203ENST00000395969 UPP2O95045 317 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 RECKO95980 971 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 CFBP00751 764 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 GZMAP12544 262 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 FERP16591 822 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 GJA5P36382 358 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 MDH1P40925 334 aaKnown RBP5.77□□□□□ -1.49
VPS41-203ENST00000395969 EFNA5P52803 228 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 C2orf54Q08AI8 447 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 USH1GQ495M9 461 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 ANKRD20A8PQ5CZ79 823 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 SPDYCQ5MJ68 293 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 ARHGEF16Q5VV41 709 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 SLFN12LQ6IEE8 588 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 SNRNP48Q6IEG0 339 aaKnown RBP5.77□□□□□ -1.49
VPS41-203ENST00000395969 IFNL1Q8IU54 200 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 SULF1Q8IWU6 871 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 MREGQ8N565 214 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 CCDC26Q8TAB7 109 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 SEC14L1Q92503 715 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 WNK4Q96J92 1243 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 CHP1Q99653 195 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 ASCC2Q9H1I8 757 aaPredicted RBP5.77□□□□□ -1.49
VPS41-203ENST00000395969 ISCUQ9H1K1 167 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 CYP26B1Q9NR63 512 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 HOMER3Q9NSC5 361 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 TAB2Q9NYJ8 693 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 ARMCX3Q9UH62 379 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms