RNA–Protein interactions for RNA: ENST00000395363.5

HLA-DQA1-203, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-203ENST00000395363 TMEM175Q9BSA9 504 aa12.79□□□□□ -0.36
HLA-DQA1-203ENST00000395363 HERC2P3Q9BVR0 1158 aa12.79□□□□□ -0.36
HLA-DQA1-203ENST00000395363 TARS2Q9BW92 718 aaKnown RBP12.79□□□□□ -0.36
HLA-DQA1-203ENST00000395363 PHF7Q9BWX1 381 aaPredicted RBP12.79□□□□□ -0.36
HLA-DQA1-203ENST00000395363 C1QTNF1Q9BXJ1 281 aa12.79□□□□□ -0.36
HLA-DQA1-203ENST00000395363 C2orf40Q9H1Z8 148 aa12.79□□□□□ -0.36
HLA-DQA1-203ENST00000395363 DNM3Q9UQ16 869 aa12.79□□□□□ -0.36
HLA-DQA1-203ENST00000395363 GIT1Q9Y2X7 761 aa12.79□□□□□ -0.36
HLA-DQA1-203ENST00000395363 KIF3AQ9Y496 699 aa12.79□□□□□ -0.36
HLA-DQA1-203ENST00000395363 CLIC4Q9Y696 253 aa12.79□□□□□ -0.36
HLA-DQA1-203ENST00000395363 COL4A3Q01955 1670 aa12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 C2CD4DB7Z1M9 353 aa12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 I3L4J1 428 aa12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 ACKR2O00590 384 aa12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 TEX28O15482 410 aa12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 RFPL2O75678 378 aa12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 EFEMP2O95967 443 aa12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 SOD2P04179 222 aa12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 KLRC2P26717 231 aa12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 MARCKSP29966 332 aaPredicted RBP12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 CLCN4P51793 760 aa12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 SOX4Q06945 474 aaPredicted RBP12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 NCBP1Q09161 790 aaKnown RBP12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 GRIK3Q13003 919 aa12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 SF3A1Q15459 793 aaKnown RBP12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 NAB2Q15742 525 aa12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 FOXD4L5Q5VV16 416 aaPredicted RBP12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 FUT10Q6P4F1 479 aa12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 HFE2Q6ZVN8 426 aa12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 CABP7Q86V35 215 aa12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 RNF168Q8IYW5 571 aaPredicted RBP12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 TMEM87AQ8NBN3 555 aa12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 CNNM3Q8NE01 707 aa12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 FOXD4L4Q8WXT5 416 aaPredicted RBP12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 KIFAP3Q92845 792 aa12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 CASP10Q92851 521 aa12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 PRIMPOLQ96LW4 560 aa12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 CDT1Q9H211 546 aa12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 KANSL3Q9P2N6 904 aa12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.78□□□□□ -0.36
HLA-DQA1-203ENST00000395363 WDR87Q6ZQQ6 2873 aa12.77□□□□□ -0.36
HLA-DQA1-203ENST00000395363 LAD1O00515 517 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 ADAM12O43184 909 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 GPR37L1O60883 481 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 URODP06132 367 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 ASGR2P07307 311 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 PLA2G4BP0C869 781 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 PLCG1P19174 1290 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 MUTP22033 750 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 GLUD2P49448 558 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 MCM2P49736 904 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 SLC12A3P55017 1021 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 RESTQ13127 1097 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 MCM6Q14566 821 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 PPP2R5AQ15172 486 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 PCBP1Q15365 356 aaKnown RBP eCLIP12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 ZNF568Q3ZCX4 644 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 ARSHQ5FYA8 562 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 RTP2Q5QGT7 225 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 HYIQ5T013 277 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 KIAA0319Q5VV43 1072 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 PALB2Q86YC2 1186 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 C3orf58Q8NDZ4 430 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 RIN2Q8WYP3 895 aaPredicted RBP12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 FBXL18Q96ME1 805 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 CLIC6Q96NY7 704 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 POP1Q99575 1024 aaKnown RBP12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 ACO2Q99798 780 aaKnown RBP12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 RAB34Q9BZG1 259 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 HAPLN2Q9GZV7 340 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 IKZF4Q9H2S9 585 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 UBN1Q9NPG3 1134 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 KMT5AQ9NQR1 393 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 MAN1C1Q9NR34 630 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 MRPL17Q9NRX2 175 aaKnown RBP12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 BLOC1S4Q9NUP1 217 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 ARHGAP28Q9P2N2 729 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 ANKFY1Q9P2R3 1169 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 ADAM28Q9UKQ2 775 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 IRAK3Q9Y616 596 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 PHLPP2Q6ZVD8 1323 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 CACNA1HO95180 2353 aa12.77□□□□□ -0.37
HLA-DQA1-203ENST00000395363 VPS13AQ96RL7 3174 aa12.76□□□□□ -0.37
HLA-DQA1-203ENST00000395363 K7ERI5 159 aa12.76□□□□□ -0.37
HLA-DQA1-203ENST00000395363 ABLIM1O14639 778 aa12.76□□□□□ -0.37
HLA-DQA1-203ENST00000395363 SRGAP2BP0DMP2 458 aa12.76□□□□□ -0.37
HLA-DQA1-203ENST00000395363 SYT1P21579 422 aa12.76□□□□□ -0.37
HLA-DQA1-203ENST00000395363 SPAG1Q07617 926 aa12.76□□□□□ -0.37
HLA-DQA1-203ENST00000395363 DMP1Q13316 513 aaPredicted RBP12.76□□□□□ -0.37
HLA-DQA1-203ENST00000395363 TUSC3Q13454 348 aa12.76□□□□□ -0.37
HLA-DQA1-203ENST00000395363 HSP90AA2PQ14568 343 aaPredicted RBP12.76□□□□□ -0.37
HLA-DQA1-203ENST00000395363 HERC4Q5GLZ8 1057 aaPredicted RBP12.76□□□□□ -0.37
HLA-DQA1-203ENST00000395363 GPBP1Q86WP2 473 aa12.76□□□□□ -0.37
HLA-DQA1-203ENST00000395363 EPSTI1Q96J88 318 aa12.76□□□□□ -0.37
HLA-DQA1-203ENST00000395363 CDK5RAP3Q96JB5 506 aa12.76□□□□□ -0.37
HLA-DQA1-203ENST00000395363 ZMAT2Q96NC0 199 aaKnown RBP12.76□□□□□ -0.37
HLA-DQA1-203ENST00000395363 REEP2Q9BRK0 252 aa12.76□□□□□ -0.37
HLA-DQA1-203ENST00000395363 ADAM7Q9H2U9 754 aa12.76□□□□□ -0.37
HLA-DQA1-203ENST00000395363 PDGFBP01127 241 aaPredicted RBP12.75□□□□□ -0.37
HLA-DQA1-203ENST00000395363 BRCC3P46736 316 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms