RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 FARP2O94887 1054 aaPredicted RBP15.04■□□□□ -0
SNCA-204ENST00000394989 EDN1P05305 212 aa15.04■□□□□ -0
SNCA-204ENST00000394989 GLRA2P23416 452 aa15.04■□□□□ -0
SNCA-204ENST00000394989 MFAP3P55082 362 aa15.04■□□□□ -0
SNCA-204ENST00000394989 HADHBP55084 474 aaKnown RBP15.04■□□□□ -0
SNCA-204ENST00000394989 FMO1Q01740 532 aa15.04■□□□□ -0
SNCA-204ENST00000394989 TTC19Q6DKK2 380 aaPredicted RBP15.04■□□□□ -0
SNCA-204ENST00000394989 C15orf39Q6ZRI6 1047 aa15.04■□□□□ -0
SNCA-204ENST00000394989 IFT81Q8WYA0 676 aa15.04■□□□□ -0
SNCA-204ENST00000394989 BICD1Q96G01 975 aa15.04■□□□□ -0
SNCA-204ENST00000394989 PI4K2AQ9BTU6 479 aa15.04■□□□□ -0
SNCA-204ENST00000394989 PORCNQ9H237 461 aa15.04■□□□□ -0
SNCA-204ENST00000394989 GSTTP1A0A1W2PQM5 241 aa15.03■□□□□ -0
SNCA-204ENST00000394989 GOLGA6BA6NDN3 693 aa15.03■□□□□ -0
SNCA-204ENST00000394989 SPATC1LQ9H0A9 340 aa15.03■□□□□ -0
SNCA-204ENST00000394989 DDX47Q9H0S4 455 aaKnown RBP15.03■□□□□ -0
SNCA-204ENST00000394989 NR2E1Q9Y466 385 aa15.03■□□□□ -0
SNCA-204ENST00000394989 SART1O43290 800 aaKnown RBP15.03■□□□□ -0
SNCA-204ENST00000394989 CYP11B1P15538 503 aa15.03■□□□□ -0
SNCA-204ENST00000394989 ECHS1P30084 290 aa15.03■□□□□ -0
SNCA-204ENST00000394989 GTF2H1P32780 548 aa15.03■□□□□ -0
SNCA-204ENST00000394989 ERVK-9P63128 1117 aa15.03■□□□□ -0
SNCA-204ENST00000394989 EP400NLQ6ZTU2 488 aa15.03■□□□□ -0
SNCA-204ENST00000394989 DDX1Q92499 740 aaKnown RBP15.03■□□□□ -0
SNCA-204ENST00000394989 ALG3Q92685 438 aa15.03■□□□□ -0
SNCA-204ENST00000394989 CLMNQ96JQ2 1002 aa15.03■□□□□ -0
SNCA-204ENST00000394989 ADARB2Q9NS39 739 aaKnown RBP15.03■□□□□ -0
SNCA-204ENST00000394989 PSD3Q9NYI0 1048 aa15.03■□□□□ -0
SNCA-204ENST00000394989 PTPRJQ12913 1337 aa15.02■□□□□ -0
SNCA-204ENST00000394989 BHMG1C9JSJ3 638 aaPredicted RBP15.02■□□□□ -0
SNCA-204ENST00000394989 ATMINO43313 823 aaPredicted RBP15.02■□□□□ -0
SNCA-204ENST00000394989 RTN2O75298 545 aa15.02■□□□□ -0
SNCA-204ENST00000394989 ARL2P36404 184 aa15.02■□□□□ -0
SNCA-204ENST00000394989 NLRP11P59045 1033 aaKnown RBP15.02■□□□□ -0
SNCA-204ENST00000394989 CLDN10P78369 228 aa15.02■□□□□ -0
SNCA-204ENST00000394989 TCEAL1Q15170 157 aa15.02■□□□□ -0
SNCA-204ENST00000394989 LMBRD2Q68DH5 695 aaPredicted RBP15.02■□□□□ -0
SNCA-204ENST00000394989 RHOT2Q8IXI1 618 aa15.02■□□□□ -0
SNCA-204ENST00000394989 NIFKQ9BYG3 293 aaKnown RBP15.02■□□□□ -0
SNCA-204ENST00000394989 STYXL1Q9Y6J8 313 aa15.02■□□□□ -0
SNCA-204ENST00000394989 A0A0G2JLL6 359 aaPredicted RBP15.02□□□□□ -0.01
SNCA-204ENST00000394989 KRIT1O00522 736 aa15.02□□□□□ -0.01
SNCA-204ENST00000394989 GRIN3BO60391 1043 aa15.02□□□□□ -0.01
SNCA-204ENST00000394989 CNMDO75829 334 aa15.02□□□□□ -0.01
SNCA-204ENST00000394989 LIG3P49916 1009 aa15.02□□□□□ -0.01
SNCA-204ENST00000394989 CRELD2Q6UXH1 353 aaPredicted RBP15.02□□□□□ -0.01
SNCA-204ENST00000394989 GADL1Q6ZQY3 521 aa15.02□□□□□ -0.01
SNCA-204ENST00000394989 PRRT2Q7Z6L0 340 aaPredicted RBP15.02□□□□□ -0.01
SNCA-204ENST00000394989 NCAPG2Q86XI2 1143 aa15.02□□□□□ -0.01
SNCA-204ENST00000394989 KCNN1Q92952 543 aa15.02□□□□□ -0.01
SNCA-204ENST00000394989 ZBTB45Q96K62 511 aaPredicted RBP15.02□□□□□ -0.01
SNCA-204ENST00000394989 NT5C1BQ96P26 610 aa15.02□□□□□ -0.01
SNCA-204ENST00000394989 ELP3Q9H9T3 547 aa15.02□□□□□ -0.01
SNCA-204ENST00000394989 TTC7AQ9ULT0 858 aaPredicted RBP15.02□□□□□ -0.01
SNCA-204ENST00000394989 CSADQ9Y600 493 aa15.02□□□□□ -0.01
SNCA-204ENST00000394989 ALG6Q9Y672 507 aa15.02□□□□□ -0.01
SNCA-204ENST00000394989 EXTL3O43909 919 aa15.01□□□□□ -0.01
SNCA-204ENST00000394989 CALCAP01258 141 aa15.01□□□□□ -0.01
SNCA-204ENST00000394989 GZMAP12544 262 aa15.01□□□□□ -0.01
SNCA-204ENST00000394989 LIG4P49917 911 aa15.01□□□□□ -0.01
SNCA-204ENST00000394989 GPC5P78333 572 aa15.01□□□□□ -0.01
SNCA-204ENST00000394989 DNAJC21Q5F1R6 531 aaKnown RBP15.01□□□□□ -0.01
SNCA-204ENST00000394989 MOB2Q70IA6 237 aa15.01□□□□□ -0.01
SNCA-204ENST00000394989 PSPC1Q8WXF1 523 aaKnown RBP15.01□□□□□ -0.01
SNCA-204ENST00000394989 OTUD5Q96G74 571 aa15.01□□□□□ -0.01
SNCA-204ENST00000394989 ZNF233A6NK53 670 aa15.01□□□□□ -0.01
SNCA-204ENST00000394989 FGGP02679 453 aa15.01□□□□□ -0.01
SNCA-204ENST00000394989 ACOT2P49753 483 aa15.01□□□□□ -0.01
SNCA-204ENST00000394989 TARBP2Q15633 366 aaKnown RBP15.01□□□□□ -0.01
SNCA-204ENST00000394989 ZBTB41Q5SVQ8 909 aa15.01□□□□□ -0.01
SNCA-204ENST00000394989 LRRC31Q6UY01 552 aa15.01□□□□□ -0.01
SNCA-204ENST00000394989 CTTNBP2NLQ9P2B4 639 aa15.01□□□□□ -0.01
SNCA-204ENST00000394989 FBXO40Q9UH90 709 aa15.01□□□□□ -0.01
SNCA-204ENST00000394989 NAMPTP43490 491 aa15.01□□□□□ -0.01
SNCA-204ENST00000394989 ENPEPQ07075 957 aa15.01□□□□□ -0.01
SNCA-204ENST00000394989 PAK2Q13177 524 aa15.01□□□□□ -0.01
SNCA-204ENST00000394989 NNTQ13423 1086 aa15.01□□□□□ -0.01
SNCA-204ENST00000394989 DRP2Q13474 957 aa15.01□□□□□ -0.01
SNCA-204ENST00000394989 EEPD1Q7L9B9 569 aa15.01□□□□□ -0.01
SNCA-204ENST00000394989 SULF1Q8IWU6 871 aa15.01□□□□□ -0.01
SNCA-204ENST00000394989 DCPSQ96C86 337 aaKnown RBP15.01□□□□□ -0.01
SNCA-204ENST00000394989 SH3GL2Q99962 352 aa15.01□□□□□ -0.01
SNCA-204ENST00000394989 AMACRQ9UHK6 382 aa15.01□□□□□ -0.01
SNCA-204ENST00000394989 IVLP07476 585 aa15□□□□□ -0.01
SNCA-204ENST00000394989 MARCKSL1P49006 195 aa15□□□□□ -0.01
SNCA-204ENST00000394989 CDR2Q01850 454 aa15□□□□□ -0.01
SNCA-204ENST00000394989 POU5F1Q01860 360 aaKnown RBP15□□□□□ -0.01
SNCA-204ENST00000394989 C11orf63Q6NUN7 778 aa15□□□□□ -0.01
SNCA-204ENST00000394989 AADACL2Q6P093 401 aa15□□□□□ -0.01
SNCA-204ENST00000394989 KRT35Q92764 455 aa15□□□□□ -0.01
SNCA-204ENST00000394989 RNPC3Q96LT9 517 aaKnown RBP15□□□□□ -0.01
SNCA-204ENST00000394989 FGD4Q96M96 766 aa15□□□□□ -0.01
SNCA-204ENST00000394989 PAGR1Q9BTK6 254 aa15□□□□□ -0.01
SNCA-204ENST00000394989 ASCC2Q9H1I8 757 aaPredicted RBP15□□□□□ -0.01
SNCA-204ENST00000394989 CARD9Q9H257 536 aa15□□□□□ -0.01
SNCA-204ENST00000394989 TXNRD2Q9NNW7 524 aa15□□□□□ -0.01
SNCA-204ENST00000394989 LRRIQ4A6NIV6 560 aa15□□□□□ -0.01
SNCA-204ENST00000394989 H0YCG3 227 aa15□□□□□ -0.01
SNCA-204ENST00000394989 CCDC188H7C350 402 aa15□□□□□ -0.01
SNCA-204ENST00000394989 ARIH2O95376 493 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms