RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 DAPK3O43293 454 aa17.07■□□□□ 0.32
SMARCD1-202ENST00000394963 AMHR2Q16671 573 aa17.07■□□□□ 0.32
SMARCD1-202ENST00000394963 KIZQ2M2Z5 673 aa17.07■□□□□ 0.32
SMARCD1-202ENST00000394963 TMEM130Q8N3G9 435 aa17.07■□□□□ 0.32
SMARCD1-202ENST00000394963 CHST13Q8NET6 341 aa17.07■□□□□ 0.32
SMARCD1-202ENST00000394963 RNF40O75150 1001 aa17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 KCNA2P16389 499 aa17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 ZNF564Q8TBZ8 553 aaPredicted RBP17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 PARD3BQ8TEW8 1205 aa17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 LENG1Q96BZ8 264 aaPredicted RBP17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 INPP4AQ96PE3 977 aaPredicted RBP17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 KCND2Q9NZV8 630 aa17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 ADAM22Q9P0K1 906 aa17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 ABT1Q9ULW3 272 aaKnown RBP17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 ADGRA3Q8IWK6 1321 aa17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 DCAF8L1A6NGE4 600 aa17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 PDHXO00330 501 aa17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 SART1O43290 800 aaKnown RBP17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 RGS20O76081 388 aa17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 TNNC2P02585 160 aa17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 GNA15P30679 374 aa17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 YARSP54577 528 aaKnown RBP17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 GPC5P78333 572 aa17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 SNAPC2Q13487 334 aa17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 CPNE8Q86YQ8 564 aa17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 SH2D3CQ8N5H7 860 aa17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 AGTPBP1Q9UPW5 1226 aa17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 ALG6Q9Y672 507 aa17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 IGSF9BQ9UPX0 1349 aa17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 B4GALT5O43286 388 aa17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 DHX9Q08211 1270 aaKnown RBP17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 LNX1Q8TBB1 728 aaPredicted RBP17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 EDEM3Q9BZQ6 932 aa17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 PARP2Q9UGN5 583 aa17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 TSKSQ9UJT2 592 aa17.06■□□□□ 0.32
SMARCD1-202ENST00000394963 MYH15Q9Y2K3 1946 aa17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 RAD51CO43502 376 aa17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 KRT14P02533 472 aa17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 PAK2Q13177 524 aa17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 NCOA4Q13772 614 aa17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 C2orf69Q8N8R5 385 aa17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 GRAP2O75791 330 aa17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 CTNNA1P35221 906 aaKnown RBP17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 RAP1GAPP47736 663 aa17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 IFRD2Q12894 506 aaPredicted RBP17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 EPM2AIP1Q7L775 607 aaPredicted RBP17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 FASTKD5Q7L8L6 764 aaKnown RBP17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 CREG2Q8IUH2 290 aa17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 RNF10Q8N5U6 811 aaKnown RBP17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 TPCN2Q8NHX9 752 aa17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 SELENOSQ9BQE4 189 aa17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 AIPL1Q9NZN9 384 aa17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 PCSK1NQ9UHG2 260 aa17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 GLI1P08151 1106 aa17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 COMTP21964 271 aa17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 GLRA2P23416 452 aa17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 ADSSP30520 456 aa17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 CETN2P41208 172 aa17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 CDH8P55286 799 aa17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 RNPC3Q96LT9 517 aaKnown RBP17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 FUT8Q9BYC5 575 aa17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 XPNPEP1Q9NQW7 623 aa17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 MTUS1Q9ULD2 1270 aa17.05■□□□□ 0.32
SMARCD1-202ENST00000394963 ECM29Q5VYK3 1845 aa17.04■□□□□ 0.32
SMARCD1-202ENST00000394963 LY75O60449 1722 aa17.04■□□□□ 0.32
SMARCD1-202ENST00000394963 A0A087WZ62 844 aa17.04■□□□□ 0.32
SMARCD1-202ENST00000394963 SOWAHBA6NEL2 793 aa17.04■□□□□ 0.32
SMARCD1-202ENST00000394963 SCP2P22307 547 aa17.04■□□□□ 0.32
SMARCD1-202ENST00000394963 ALCAMQ13740 583 aa17.04■□□□□ 0.32
SMARCD1-202ENST00000394963 MMS22LQ6ZRQ5 1243 aa17.04■□□□□ 0.32
SMARCD1-202ENST00000394963 NOP9Q86U38 636 aaKnown RBP17.04■□□□□ 0.32
SMARCD1-202ENST00000394963 GPRC5AQ8NFJ5 357 aa17.04■□□□□ 0.32
SMARCD1-202ENST00000394963 OR5B17Q8NGF7 314 aa17.04■□□□□ 0.32
SMARCD1-202ENST00000394963 RFFLQ8WZ73 363 aa17.04■□□□□ 0.32
SMARCD1-202ENST00000394963 CYFIP2Q96F07 1278 aa17.04■□□□□ 0.32
SMARCD1-202ENST00000394963 RPGRIP1Q96KN7 1286 aa17.04■□□□□ 0.32
SMARCD1-202ENST00000394963 PAIP2Q9BPZ3 127 aaKnown RBP17.04■□□□□ 0.32
SMARCD1-202ENST00000394963 FDXACB1Q9BRP7 624 aaPredicted RBP17.04■□□□□ 0.32
SMARCD1-202ENST00000394963 ZWILCHQ9H900 591 aa17.04■□□□□ 0.32
SMARCD1-202ENST00000394963 ARIH2O95376 493 aa17.04■□□□□ 0.32
SMARCD1-202ENST00000394963 ADORA2AP29274 412 aa17.04■□□□□ 0.32
SMARCD1-202ENST00000394963 MARCKSL1P49006 195 aa17.04■□□□□ 0.32
SMARCD1-202ENST00000394963 LIN9Q5TKA1 542 aa17.04■□□□□ 0.32
SMARCD1-202ENST00000394963 LBX2Q6XYB7 198 aa17.04■□□□□ 0.32
SMARCD1-202ENST00000394963 MKNK1Q9BUB5 465 aa17.04■□□□□ 0.32
SMARCD1-202ENST00000394963 RPF1Q9H9Y2 349 aaKnown RBP17.04■□□□□ 0.32
SMARCD1-202ENST00000394963 FRMD3A2A2Y4 597 aa17.03■□□□□ 0.32
SMARCD1-202ENST00000394963 H3BQF6 201 aa17.03■□□□□ 0.32
SMARCD1-202ENST00000394963 MAFGO15525 162 aa17.03■□□□□ 0.32
SMARCD1-202ENST00000394963 CTSHP09668 335 aa17.03■□□□□ 0.32
SMARCD1-202ENST00000394963 NOP14P78316 857 aaKnown RBP17.03■□□□□ 0.32
SMARCD1-202ENST00000394963 PPATQ06203 517 aa17.03■□□□□ 0.32
SMARCD1-202ENST00000394963 ZNF699Q32M78 642 aa17.03■□□□□ 0.32
SMARCD1-202ENST00000394963 KRT71Q3SY84 523 aa17.03■□□□□ 0.32
SMARCD1-202ENST00000394963 CYP4A22Q5TCH4 519 aa17.03■□□□□ 0.32
SMARCD1-202ENST00000394963 PAPD7Q5XG87 772 aaKnown RBP17.03■□□□□ 0.32
SMARCD1-202ENST00000394963 CATSPER4Q7RTX7 472 aa17.03■□□□□ 0.32
SMARCD1-202ENST00000394963 TRIM7Q9C029 511 aa17.03■□□□□ 0.32
SMARCD1-202ENST00000394963 TSPYL1Q9H0U9 437 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms