RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 FZD1Q9UP38 647 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 PCDHB4Q9Y5E5 795 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 LOC102724159A0A0B4J2E5 919 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 PIK3CDO00329 1044 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 ATF2P15336 505 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 CYP11B1P15538 503 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 CD58P19256 250 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 PIK3CAP42336 1068 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 BAATQ14032 418 aaPredicted RBP11.29□□□□□ -0.6
ACTN1-203ENST00000394419 PWP2Q15269 919 aaKnown RBP11.29□□□□□ -0.6
ACTN1-203ENST00000394419 SPOPLQ6IQ16 392 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 SLFN11Q7Z7L1 901 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 SLC13A5Q86YT5 568 aaPredicted RBP11.29□□□□□ -0.6
ACTN1-203ENST00000394419 SUPT20HQ8NEM7 779 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 EPS8L1Q8TE68 723 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 SEMA4DQ92854 862 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 HVCN1Q96D96 273 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 C9orf72Q96LT7 481 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 NSRP1Q9H0G5 558 aaKnown RBP11.29□□□□□ -0.6
ACTN1-203ENST00000394419 RAB20Q9NX57 234 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 STXBP5LQ9Y2K9 1186 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 DIS3Q9Y2L1 958 aaKnown RBP11.29□□□□□ -0.6
ACTN1-203ENST00000394419 WDR64B1ANS9 1081 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 POC1B-GALNT4F8VUJ3 575 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 COILP38432 576 aaPredicted RBP11.28□□□□□ -0.6
ACTN1-203ENST00000394419 CAP2P40123 477 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 STRN3Q13033 797 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 BYSLQ13895 437 aaKnown RBP11.28□□□□□ -0.6
ACTN1-203ENST00000394419 SEPT7Q16181 437 aaKnown RBP11.28□□□□□ -0.6
ACTN1-203ENST00000394419 C6orf118Q5T5N4 469 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 WDR78Q5VTH9 848 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 RSBN1LQ6PCB5 846 aaPredicted RBP11.28□□□□□ -0.6
ACTN1-203ENST00000394419 TMEM270Q6UE05 265 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 BTNL9Q6UXG8 535 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 ZC3H3Q8IXZ2 948 aaKnown RBP11.28□□□□□ -0.6
ACTN1-203ENST00000394419 ARHGEF2Q92974 986 aaKnown RBP11.28□□□□□ -0.6
ACTN1-203ENST00000394419 ANAPC5Q9UJX4 755 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 BTAF1O14981 1849 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 AHDC1Q5TGY3 1603 aaPredicted RBP11.28□□□□□ -0.6
ACTN1-203ENST00000394419 KIAA0391O15091 583 aaKnown RBP11.28□□□□□ -0.6
ACTN1-203ENST00000394419 GJB6O95452 261 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 STX2P32856 288 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 NPTX2P47972 431 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 PSMC5P62195 406 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 SLC20A2Q08357 652 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 MTMR2Q13614 643 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 UBAP2Q5T6F2 1119 aaKnown RBP11.28□□□□□ -0.6
ACTN1-203ENST00000394419 AGBL2Q5U5Z8 902 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 CHADLQ6NUI6 762 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 EP400NLQ6ZTU2 488 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 SEPT14Q6ZU15 432 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 EEPD1Q7L9B9 569 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 PRUNE1Q86TP1 453 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 SRRM1Q8IYB3 904 aaKnown RBP11.28□□□□□ -0.6
ACTN1-203ENST00000394419 LRRC34Q8IZ02 419 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 RASGEF1CQ8N431 466 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 JDP2Q8WYK2 163 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 BORCS6Q96GS4 357 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 WNT8AQ9H1J5 351 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 CNOT10Q9H9A5 744 aaKnown RBP11.28□□□□□ -0.6
ACTN1-203ENST00000394419 KLC4Q9NSK0 619 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 ZNF148Q9UQR1 794 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 TRAPPC3O43617 180 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 POLGP54098 1239 aaPredicted RBP11.28□□□□□ -0.6
ACTN1-203ENST00000394419 PPATQ06203 517 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 DUPD1Q68J44 220 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 TTC27Q6P3X3 843 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 DCUN1D2Q6PH85 259 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 SV2AQ7L0J3 742 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 TMEM143Q96AN5 459 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 KREMEN1Q96MU8 473 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 HOMER3Q9NSC5 361 aa11.28□□□□□ -0.6
ACTN1-203ENST00000394419 SPATA31A6Q5VVP1 1343 aa11.27□□□□□ -0.6
ACTN1-203ENST00000394419 KLRG2A4D1S0 409 aaPredicted RBP11.27□□□□□ -0.61
ACTN1-203ENST00000394419 HSPA6P17066 643 aa11.27□□□□□ -0.61
ACTN1-203ENST00000394419 RRM1P23921 792 aa11.27□□□□□ -0.61
ACTN1-203ENST00000394419 DYNLT1P63172 113 aa11.27□□□□□ -0.61
ACTN1-203ENST00000394419 ADCY2Q08462 1091 aa11.27□□□□□ -0.61
ACTN1-203ENST00000394419 SLMAPQ14BN4 828 aa11.27□□□□□ -0.61
ACTN1-203ENST00000394419 BRDTQ58F21 947 aaPredicted RBP11.27□□□□□ -0.61
ACTN1-203ENST00000394419 FAM47EQ6ZV65 393 aa11.27□□□□□ -0.61
ACTN1-203ENST00000394419 FLAD1Q8NFF5 587 aa11.27□□□□□ -0.61
ACTN1-203ENST00000394419 ACSF2Q96CM8 615 aaPredicted RBP11.27□□□□□ -0.61
ACTN1-203ENST00000394419 NKIRAS1Q9NYS0 192 aa11.27□□□□□ -0.61
ACTN1-203ENST00000394419 KCND2Q9NZV8 630 aa11.27□□□□□ -0.61
ACTN1-203ENST00000394419 TBX20Q9UMR3 447 aa11.27□□□□□ -0.61
ACTN1-203ENST00000394419 RPSAP08865 295 aaKnown RBP11.27□□□□□ -0.61
ACTN1-203ENST00000394419 KIF22Q14807 665 aa11.27□□□□□ -0.61
ACTN1-203ENST00000394419 DPY19L2P1Q6NXN4 242 aa11.27□□□□□ -0.61
ACTN1-203ENST00000394419 PLEKHO2Q8TD55 490 aa11.27□□□□□ -0.61
ACTN1-203ENST00000394419 SYTL5Q8TDW5 730 aaPredicted RBP11.27□□□□□ -0.61
ACTN1-203ENST00000394419 CCDC77Q9BR77 488 aa11.27□□□□□ -0.61
ACTN1-203ENST00000394419 GPR88Q9GZN0 384 aa11.27□□□□□ -0.61
ACTN1-203ENST00000394419 RANBP17Q9H2T7 1088 aaKnown RBP11.27□□□□□ -0.61
ACTN1-203ENST00000394419 CHST7Q9NS84 486 aa11.27□□□□□ -0.61
ACTN1-203ENST00000394419 RNF146Q9NTX7 359 aa11.27□□□□□ -0.61
ACTN1-203ENST00000394419 TBC1D22BQ9NU19 505 aa11.27□□□□□ -0.61
ACTN1-203ENST00000394419 DMAC2Q9NW81 257 aa11.27□□□□□ -0.61
ACTN1-203ENST00000394419 CTNNAL1Q9UBT7 734 aa11.27□□□□□ -0.61
ACTN1-203ENST00000394419 PFASO15067 1338 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms