RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 STRA6Q9BX79 667 aa20.79■□□□□ 0.92
PDLIM7-204ENST00000393546 LMAN2LQ9H0V9 348 aa20.79■□□□□ 0.92
PDLIM7-204ENST00000393546 ALG13Q9NP73 1137 aaKnown RBP20.79■□□□□ 0.92
PDLIM7-204ENST00000393546 SPG21Q9NZD8 308 aa20.79■□□□□ 0.92
PDLIM7-204ENST00000393546 EXOC7Q9UPT5 735 aa20.79■□□□□ 0.92
PDLIM7-204ENST00000393546 GRM6O15303 877 aa20.78■□□□□ 0.92
PDLIM7-204ENST00000393546 PPP1R37O75864 691 aa20.78■□□□□ 0.92
PDLIM7-204ENST00000393546 FGF18O76093 207 aa20.78■□□□□ 0.92
PDLIM7-204ENST00000393546 DDHD2O94830 711 aa20.78■□□□□ 0.92
PDLIM7-204ENST00000393546 ALDH2P05091 517 aa20.78■□□□□ 0.92
PDLIM7-204ENST00000393546 ITGB1P05556 798 aa20.78■□□□□ 0.92
PDLIM7-204ENST00000393546 MYL1P05976 194 aa20.78■□□□□ 0.92
PDLIM7-204ENST00000393546 KRT17Q04695 432 aa20.78■□□□□ 0.92
PDLIM7-204ENST00000393546 L1TD1Q5T7N2 865 aaKnown RBP20.78■□□□□ 0.92
PDLIM7-204ENST00000393546 KRBA2Q6ZNG9 492 aa20.78■□□□□ 0.92
PDLIM7-204ENST00000393546 SPPL3Q8TCT6 385 aa20.78■□□□□ 0.92
PDLIM7-204ENST00000393546 MRPL38Q96DV4 380 aaKnown RBP20.78■□□□□ 0.92
PDLIM7-204ENST00000393546 ACAP3Q96P50 834 aa20.78■□□□□ 0.92
PDLIM7-204ENST00000393546 PUF60Q9UHX1 559 aaKnown RBP20.78■□□□□ 0.92
PDLIM7-204ENST00000393546 NR1I2O75469 434 aa20.77■□□□□ 0.92
PDLIM7-204ENST00000393546 GALTP07902 379 aa20.77■□□□□ 0.92
PDLIM7-204ENST00000393546 MYBP10242 640 aa20.77■□□□□ 0.92
PDLIM7-204ENST00000393546 PBX3P40426 434 aa20.77■□□□□ 0.92
PDLIM7-204ENST00000393546 OSTNP61366 133 aa20.77■□□□□ 0.92
PDLIM7-204ENST00000393546 UBE3AQ05086 875 aa20.77■□□□□ 0.92
PDLIM7-204ENST00000393546 KYAT1Q16773 422 aa20.77■□□□□ 0.92
PDLIM7-204ENST00000393546 SLFN12LQ6IEE8 588 aa20.77■□□□□ 0.92
PDLIM7-204ENST00000393546 KANK3Q6NY19 840 aa20.77■□□□□ 0.92
PDLIM7-204ENST00000393546 CEP120Q8N960 986 aa20.77■□□□□ 0.92
PDLIM7-204ENST00000393546 GSTCDQ8NEC7 633 aa20.77■□□□□ 0.92
PDLIM7-204ENST00000393546 MAFAQ8NHW3 353 aaPredicted RBP20.77■□□□□ 0.92
PDLIM7-204ENST00000393546 TMEM175Q9BSA9 504 aa20.77■□□□□ 0.92
PDLIM7-204ENST00000393546 TOPORSQ9NS56 1045 aaPredicted RBP20.77■□□□□ 0.92
PDLIM7-204ENST00000393546 FAN1Q9Y2M0 1017 aa20.77■□□□□ 0.92
PDLIM7-204ENST00000393546 CDH23Q9H251 3354 aa20.76■□□□□ 0.91
PDLIM7-204ENST00000393546 NT5C1B-RDH14C9J2C7 533 aa20.76■□□□□ 0.91
PDLIM7-204ENST00000393546 THP07101 528 aa20.76■□□□□ 0.91
PDLIM7-204ENST00000393546 PLCB3Q01970 1234 aa20.76■□□□□ 0.91
PDLIM7-204ENST00000393546 GRIK3Q13003 919 aa20.76■□□□□ 0.91
PDLIM7-204ENST00000393546 FAM26FQ5R3K3 315 aa20.76■□□□□ 0.91
PDLIM7-204ENST00000393546 SYCP3Q8IZU3 236 aa20.76■□□□□ 0.91
PDLIM7-204ENST00000393546 SLC39A11Q8N1S5 342 aa20.76■□□□□ 0.91
PDLIM7-204ENST00000393546 MICALL1Q8N3F8 863 aa20.76■□□□□ 0.91
PDLIM7-204ENST00000393546 POF1BQ8WVV4 589 aa20.76■□□□□ 0.91
PDLIM7-204ENST00000393546 PPM1EQ8WY54 764 aa20.76■□□□□ 0.91
PDLIM7-204ENST00000393546 HPS3Q969F9 1004 aa20.76■□□□□ 0.91
PDLIM7-204ENST00000393546 TMEM206Q9H813 350 aa20.76■□□□□ 0.91
PDLIM7-204ENST00000393546 DNAJB4Q9UDY4 337 aa20.76■□□□□ 0.91
PDLIM7-204ENST00000393546 PRRC2BQ5JSZ5 2229 aaKnown RBP20.76■□□□□ 0.91
PDLIM7-204ENST00000393546 TRANK1O15050 2925 aa20.75■□□□□ 0.91
PDLIM7-204ENST00000393546 COL4A4P53420 1690 aaPredicted RBP20.75■□□□□ 0.91
PDLIM7-204ENST00000393546 A0A0B4J269 797 aa20.75■□□□□ 0.91
PDLIM7-204ENST00000393546 ANKRD63C9JTQ0 380 aa20.75■□□□□ 0.91
PDLIM7-204ENST00000393546 PRPF6O94906 941 aaKnown RBP20.75■□□□□ 0.91
PDLIM7-204ENST00000393546 OR1G1P47890 313 aa20.75■□□□□ 0.91
PDLIM7-204ENST00000393546 SLC11A1P49279 550 aa20.75■□□□□ 0.91
PDLIM7-204ENST00000393546 CASP5P51878 434 aa20.75■□□□□ 0.91
PDLIM7-204ENST00000393546 POSTNQ15063 836 aa20.75■□□□□ 0.91
PDLIM7-204ENST00000393546 CCDC85BQ15834 202 aaPredicted RBP20.75■□□□□ 0.91
PDLIM7-204ENST00000393546 SLC39A4Q6P5W5 647 aa20.75■□□□□ 0.91
PDLIM7-204ENST00000393546 COLGALT2Q8IYK4 626 aa20.75■□□□□ 0.91
PDLIM7-204ENST00000393546 FMR1NBQ8N0W7 255 aaPredicted RBP20.75■□□□□ 0.91
PDLIM7-204ENST00000393546 TMEM169Q96HH4 297 aa20.75■□□□□ 0.91
PDLIM7-204ENST00000393546 MSTO1Q9BUK6 570 aa20.75■□□□□ 0.91
PDLIM7-204ENST00000393546 FGFBP2Q9BYJ0 223 aa20.75■□□□□ 0.91
PDLIM7-204ENST00000393546 HAPLN2Q9GZV7 340 aa20.75■□□□□ 0.91
PDLIM7-204ENST00000393546 LZTS1Q9Y250 596 aa20.75■□□□□ 0.91
PDLIM7-204ENST00000393546 TDRD15B5MCY1 1934 aaKnown RBP20.74■□□□□ 0.91
PDLIM7-204ENST00000393546 NRP1O14786 923 aa20.74■□□□□ 0.91
PDLIM7-204ENST00000393546 OGTO15294 1046 aa20.74■□□□□ 0.91
PDLIM7-204ENST00000393546 CLTAP09496 248 aa20.74■□□□□ 0.91
PDLIM7-204ENST00000393546 FAM160A1Q05DH4 1040 aa20.74■□□□□ 0.91
PDLIM7-204ENST00000393546 EHHADHQ08426 723 aa20.74■□□□□ 0.91
PDLIM7-204ENST00000393546 DSC1Q08554 894 aa20.74■□□□□ 0.91
PDLIM7-204ENST00000393546 KCNA1Q09470 495 aa20.74■□□□□ 0.91
PDLIM7-204ENST00000393546 ALKAL1Q6UXT8 129 aa20.74■□□□□ 0.91
PDLIM7-204ENST00000393546 CCDC47Q96A33 483 aaKnown RBP20.74■□□□□ 0.91
PDLIM7-204ENST00000393546 EXOC1Q9NV70 894 aa20.74■□□□□ 0.91
PDLIM7-204ENST00000393546 STYXL1Q9Y6J8 313 aa20.74■□□□□ 0.91
PDLIM7-204ENST00000393546 PTGESO14684 152 aa20.73■□□□□ 0.91
PDLIM7-204ENST00000393546 EIF3DO15371 548 aaKnown RBP eCLIP20.73■□□□□ 0.91
PDLIM7-204ENST00000393546 KLRC4O43908 158 aa20.73■□□□□ 0.91
PDLIM7-204ENST00000393546 B4GALT3O60512 393 aa20.73■□□□□ 0.91
PDLIM7-204ENST00000393546 DNAJB1P25685 340 aa20.73■□□□□ 0.91
PDLIM7-204ENST00000393546 PSMD2Q13200 908 aa20.73■□□□□ 0.91
PDLIM7-204ENST00000393546 SEZ6Q53EL9 994 aa20.73■□□□□ 0.91
PDLIM7-204ENST00000393546 TIGD5Q53EQ6 642 aa20.73■□□□□ 0.91
PDLIM7-204ENST00000393546 TMEM87AQ8NBN3 555 aa20.73■□□□□ 0.91
PDLIM7-204ENST00000393546 ENGASEQ8NFI3 743 aa20.73■□□□□ 0.91
PDLIM7-204ENST00000393546 ZNF507Q8TCN5 953 aa20.73■□□□□ 0.91
PDLIM7-204ENST00000393546 MICAL1Q8TDZ2 1067 aa20.73■□□□□ 0.91
PDLIM7-204ENST00000393546 POMGNT1Q8WZA1 660 aa20.73■□□□□ 0.91
PDLIM7-204ENST00000393546 IGSF21Q96ID5 467 aa20.73■□□□□ 0.91
PDLIM7-204ENST00000393546 COLEC11Q9BWP8 271 aa20.73■□□□□ 0.91
PDLIM7-204ENST00000393546 SLC39A2Q9NP94 309 aa20.73■□□□□ 0.91
PDLIM7-204ENST00000393546 RPN1P04843 607 aaKnown RBP20.72■□□□□ 0.91
PDLIM7-204ENST00000393546 TUSC3Q13454 348 aa20.72■□□□□ 0.91
PDLIM7-204ENST00000393546 SNW1Q13573 536 aaKnown RBP20.72■□□□□ 0.91
PDLIM7-204ENST00000393546 CAMK1Q14012 370 aa20.72■□□□□ 0.91
PDLIM7-204ENST00000393546 KMT5BQ4FZB7 885 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms