RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 STK33Q9BYT3 514 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 RNPEPL1Q9HAU8 725 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 SAYSD1Q9NPB0 183 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 AAASQ9NRG9 546 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 MTMR4Q9NYA4 1195 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 SYNGAP1Q96PV0 1343 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 PNMA6FA0A0J9YX94 578 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 FAM86B1E9PN63 330 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 PODXLO00592 558 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 PEX11AO75192 247 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 FAM86B2P0C5J1 330 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 TAC1P20366 129 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 WDR4P57081 412 aaKnown RBP17.47■□□□□ 0.39
PHTF1-205ENST00000393357 NOP14P78316 857 aaKnown RBP17.47■□□□□ 0.39
PHTF1-205ENST00000393357 FASTKD3Q14CZ7 662 aaKnown RBP17.47■□□□□ 0.39
PHTF1-205ENST00000393357 COBLL1Q53SF7 1204 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 HHATQ5VTY9 493 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 DPY19L2P1Q6NXN4 242 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 PTF1AQ7RTS3 328 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 SLC25A41Q8N5S1 370 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 RAB3IPQ96QF0 476 aaPredicted RBP17.47■□□□□ 0.39
PHTF1-205ENST00000393357 APEX2Q9UBZ4 518 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 CES2O00748 559 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 CFBP00751 764 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 CD58P19256 250 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 CALB2P22676 271 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 PRKCIP41743 596 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 SERPINB4P48594 390 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 GTF2IP78347 998 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 ARHGAP4P98171 946 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 SMAD1Q15797 465 aaKnown RBP17.47■□□□□ 0.39
PHTF1-205ENST00000393357 RASIP1Q5U651 963 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 ARHGEF18Q6ZSZ5 1173 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 P2RX7Q99572 595 aaKnown RBP17.47■□□□□ 0.39
PHTF1-205ENST00000393357 ETAA1Q9NY74 926 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 ARMCX1Q9P291 453 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 ANAPC7Q9UJX3 599 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 TIAM2Q8IVF5 1701 aa17.47■□□□□ 0.39
PHTF1-205ENST00000393357 TMEM150BA6NC51 233 aa17.46■□□□□ 0.39
PHTF1-205ENST00000393357 JAM2P57087 298 aa17.46■□□□□ 0.39
PHTF1-205ENST00000393357 GPC5P78333 572 aa17.46■□□□□ 0.39
PHTF1-205ENST00000393357 IL9RQ01113 521 aa17.46■□□□□ 0.39
PHTF1-205ENST00000393357 KLC1Q07866 573 aa17.46■□□□□ 0.39
PHTF1-205ENST00000393357 PKN2Q16513 984 aaKnown RBP17.46■□□□□ 0.39
PHTF1-205ENST00000393357 TSNAXIP1Q2TAA8 658 aa17.46■□□□□ 0.39
PHTF1-205ENST00000393357 CERKLQ49MI3 558 aaPredicted RBP17.46■□□□□ 0.39
PHTF1-205ENST00000393357 VPS52Q8N1B4 723 aa17.46■□□□□ 0.39
PHTF1-205ENST00000393357 HIPK4Q8NE63 616 aa17.46■□□□□ 0.39
PHTF1-205ENST00000393357 JDP2Q8WYK2 163 aa17.46■□□□□ 0.39
PHTF1-205ENST00000393357 MCUR1Q96AQ8 359 aa17.46■□□□□ 0.39
PHTF1-205ENST00000393357 PRR11Q96HE9 360 aaPredicted RBP17.46■□□□□ 0.39
PHTF1-205ENST00000393357 TNS2Q63HR2 1409 aa17.46■□□□□ 0.39
PHTF1-205ENST00000393357 A0A1W2PPM1 405 aa17.46■□□□□ 0.39
PHTF1-205ENST00000393357 TPBGLP0DKB5 382 aa17.46■□□□□ 0.39
PHTF1-205ENST00000393357 ATF7P17544 494 aaPredicted RBP17.46■□□□□ 0.39
PHTF1-205ENST00000393357 RPA3P35244 121 aaPredicted RBP17.46■□□□□ 0.39
PHTF1-205ENST00000393357 GALNTL6Q49A17 601 aa17.46■□□□□ 0.39
PHTF1-205ENST00000393357 SEC14L1Q92503 715 aa17.46■□□□□ 0.39
PHTF1-205ENST00000393357 PI4K2AQ9BTU6 479 aa17.46■□□□□ 0.39
PHTF1-205ENST00000393357 NINJ2Q9NZG7 142 aa17.46■□□□□ 0.39
PHTF1-205ENST00000393357 KAT6AQ92794 2004 aa17.46■□□□□ 0.39
PHTF1-205ENST00000393357 PDXKO00764 312 aa17.45■□□□□ 0.38
PHTF1-205ENST00000393357 LUC7L3O95232 432 aaKnown RBP17.45■□□□□ 0.38
PHTF1-205ENST00000393357 BMP3P12645 472 aa17.45■□□□□ 0.38
PHTF1-205ENST00000393357 RRM1P23921 792 aa17.45■□□□□ 0.38
PHTF1-205ENST00000393357 PEX5P50542 639 aa17.45■□□□□ 0.38
PHTF1-205ENST00000393357 LMBRD2Q68DH5 695 aaPredicted RBP17.45■□□□□ 0.38
PHTF1-205ENST00000393357 GBP7Q8N8V2 638 aaPredicted RBP17.45■□□□□ 0.38
PHTF1-205ENST00000393357 ERMNQ8TAM6 284 aa17.45■□□□□ 0.38
PHTF1-205ENST00000393357 STK32AQ8WU08 396 aa17.45■□□□□ 0.38
PHTF1-205ENST00000393357 RIOX1Q9H6W3 641 aa17.45■□□□□ 0.38
PHTF1-205ENST00000393357 METTL14Q9HCE5 456 aaKnown RBP17.45■□□□□ 0.38
PHTF1-205ENST00000393357 FBXO6Q9NRD1 293 aaPredicted RBP17.45■□□□□ 0.38
PHTF1-205ENST00000393357 ZFP69BQ9UJL9 534 aa17.45■□□□□ 0.38
PHTF1-205ENST00000393357 USP20Q9Y2K6 914 aa17.45■□□□□ 0.38
PHTF1-205ENST00000393357 CAPN9O14815 690 aa17.45■□□□□ 0.38
PHTF1-205ENST00000393357 SPATA31C1P0DKV0 1188 aa17.45■□□□□ 0.38
PHTF1-205ENST00000393357 RBM5P52756 815 aaKnown RBP eCLIP17.45■□□□□ 0.38
PHTF1-205ENST00000393357 EIF1ADQ8N9N8 165 aaKnown RBP17.45■□□□□ 0.38
PHTF1-205ENST00000393357 CPA5Q8WXQ8 436 aa17.45■□□□□ 0.38
PHTF1-205ENST00000393357 TTC1Q99614 292 aa17.45■□□□□ 0.38
PHTF1-205ENST00000393357 TXLNGQ9NUQ3 528 aa17.45■□□□□ 0.38
PHTF1-205ENST00000393357 PARP2Q9UGN5 583 aa17.45■□□□□ 0.38
PHTF1-205ENST00000393357 GYS1P13807 737 aa17.45■□□□□ 0.38
PHTF1-205ENST00000393357 KPNB1Q14974 876 aaKnown RBP17.45■□□□□ 0.38
PHTF1-205ENST00000393357 ZYXQ15942 572 aaKnown RBP17.45■□□□□ 0.38
PHTF1-205ENST00000393357 ZNF804AQ7Z570 1209 aa17.45■□□□□ 0.38
PHTF1-205ENST00000393357 WDR66Q8TBY9 1149 aa17.45■□□□□ 0.38
PHTF1-205ENST00000393357 RUNDC3BQ96NL0 473 aa17.45■□□□□ 0.38
PHTF1-205ENST00000393357 COL5A2P05997 1499 aaPredicted RBP17.45■□□□□ 0.38
PHTF1-205ENST00000393357 ATP9AO75110 1047 aa17.44■□□□□ 0.38
PHTF1-205ENST00000393357 TTC4O95801 387 aa17.44■□□□□ 0.38
PHTF1-205ENST00000393357 KRT10P13645 584 aa17.44■□□□□ 0.38
PHTF1-205ENST00000393357 PECAM1P16284 738 aaPredicted RBP17.44■□□□□ 0.38
PHTF1-205ENST00000393357 STRN3Q13033 797 aa17.44■□□□□ 0.38
PHTF1-205ENST00000393357 EIF2AK1Q9BQI3 630 aaKnown RBP17.44■□□□□ 0.38
PHTF1-205ENST00000393357 NMRK1Q9NWW6 199 aa17.44■□□□□ 0.38
PHTF1-205ENST00000393357 GDF11O95390 407 aa17.44■□□□□ 0.38
PHTF1-205ENST00000393357 PLS3P13797 630 aa17.44■□□□□ 0.38
PHTF1-205ENST00000393357 KCNA3P22001 575 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms