RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 PRRG3Q9BZD7 231 aa4.21□□□□□ -1.74
UBR3-202ENST00000392632 ZCCHC2Q9C0B9 1178 aaKnown RBP4.21□□□□□ -1.74
UBR3-202ENST00000392632 CBX8Q9HC52 389 aa4.21□□□□□ -1.74
UBR3-202ENST00000392632 TUFT1Q9NNX1 390 aa4.21□□□□□ -1.74
UBR3-202ENST00000392632 ENTPD7Q9NQZ7 604 aa4.21□□□□□ -1.74
UBR3-202ENST00000392632 GALNT8Q9NY28 637 aa4.21□□□□□ -1.74
UBR3-202ENST00000392632 STMN3Q9NZ72 180 aa4.21□□□□□ -1.74
UBR3-202ENST00000392632 SLC9A2Q9UBY0 812 aa4.21□□□□□ -1.74
UBR3-202ENST00000392632 BLOC1S6Q9UL45 172 aa4.21□□□□□ -1.74
UBR3-202ENST00000392632 PCDHA6Q9UN73 950 aa4.21□□□□□ -1.74
UBR3-202ENST00000392632 PKP3Q9Y446 797 aa4.21□□□□□ -1.74
UBR3-202ENST00000392632 PCDHA8Q9Y5H6 950 aa4.21□□□□□ -1.74
UBR3-202ENST00000392632 COL17A1Q9UMD9 1497 aaPredicted RBP4.21□□□□□ -1.74
UBR3-202ENST00000392632 A0A1W2PP64 1363 aa4.21□□□□□ -1.74
UBR3-202ENST00000392632 KANSL1LA0AUZ9 987 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 CLIC2O15247 247 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 DGAT1O75907 488 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 GFPT2O94808 682 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 FYNP06241 537 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 CYP2C8P10632 490 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 SERPINB10P48595 397 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 KPNA1P52294 538 aaPredicted RBP4.2□□□□□ -1.74
UBR3-202ENST00000392632 RCAN1P53805 252 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 KCNQ4P56696 695 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 GNGT1P63211 74 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 KIF23Q02241 960 aaPredicted RBP4.2□□□□□ -1.74
UBR3-202ENST00000392632 GUCY2DQ02846 1103 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 RUNX1T1Q06455 604 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 PRKAA1Q13131 559 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 CDH18Q13634 790 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 SLC39A14Q15043 492 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 DGKDQ16760 1214 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 LRRC24Q50LG9 513 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 FAM83BQ5T0W9 1011 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 FBXW10Q5XX13 1052 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 ALKBH5Q6P6C2 394 aaKnown RBP4.2□□□□□ -1.74
UBR3-202ENST00000392632 APOA5Q6Q788 366 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 C4orf22Q6V702 233 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 G2E3Q7L622 706 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 PID1Q7Z2X4 250 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 ARMC2Q8NEN0 867 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 CSGALNACT1Q8TDX6 532 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 CAMKK2Q96RR4 588 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 CDK5RAP1Q96SZ6 601 aaKnown RBP4.2□□□□□ -1.74
UBR3-202ENST00000392632 CCDC3Q9BQI4 270 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 GPR63Q9BZJ6 419 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 VPS11Q9H270 941 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 TDRD3Q9H7E2 651 aaKnown RBP4.2□□□□□ -1.74
UBR3-202ENST00000392632 FAM217BQ9NTX9 383 aaPredicted RBP4.2□□□□□ -1.74
UBR3-202ENST00000392632 PRMT7Q9NVM4 692 aaPredicted RBP4.2□□□□□ -1.74
UBR3-202ENST00000392632 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.2□□□□□ -1.74
UBR3-202ENST00000392632 GABBR1Q9UBS5 961 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 CNOT8Q9UFF9 292 aaKnown RBP4.2□□□□□ -1.74
UBR3-202ENST00000392632 CNOT7Q9UIV1 285 aaKnown RBP4.2□□□□□ -1.74
UBR3-202ENST00000392632 PLA2G4CQ9UP65 541 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 CAPN7Q9Y6W3 813 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 SPATA31A6Q5VVP1 1343 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 JCADQ9P266 1359 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 NPHP4O75161 1426 aaPredicted RBP4.2□□□□□ -1.74
UBR3-202ENST00000392632 FAM135BQ49AJ0 1406 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 A0A088AWK7 358 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 PVALEFA0A1B0GWK0 134 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 PRR23D1E9PI22 279 aaPredicted RBP4.2□□□□□ -1.74
UBR3-202ENST00000392632 SMAPO00193 183 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 SLC26A4O43511 780 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 HBP1O60381 514 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 TLR2O60603 784 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 ENTPD3O75355 529 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 SASH1O94885 1247 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 IL18RAPO95256 599 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 PRR23D2P0DMB1 279 aaPredicted RBP4.2□□□□□ -1.74
UBR3-202ENST00000392632 MLNP12872 115 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 ZNF10P21506 573 aaPredicted RBP4.2□□□□□ -1.74
UBR3-202ENST00000392632 NUP62P37198 522 aaPredicted RBP4.2□□□□□ -1.74
UBR3-202ENST00000392632 AVPR1AP37288 418 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 ETF1P62495 437 aaKnown RBP4.2□□□□□ -1.74
UBR3-202ENST00000392632 GABPB1Q06547 395 aaPredicted RBP4.2□□□□□ -1.74
UBR3-202ENST00000392632 PDAP1Q13442 181 aaKnown RBP4.2□□□□□ -1.74
UBR3-202ENST00000392632 NFE2Q16621 373 aaPredicted RBP4.2□□□□□ -1.74
UBR3-202ENST00000392632 TRIM71Q2Q1W2 868 aaKnown RBP4.2□□□□□ -1.74
UBR3-202ENST00000392632 DCAF6Q58WW2 860 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 HABP4Q5JVS0 413 aaKnown RBP4.2□□□□□ -1.74
UBR3-202ENST00000392632 ZMYM1Q5SVZ6 1142 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 NAA35Q5VZE5 725 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 NLRP10Q86W26 655 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 SYT2Q8N9I0 419 aaPredicted RBP4.2□□□□□ -1.74
UBR3-202ENST00000392632 TNIP2Q8NFZ5 429 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 CAPS2Q9BXY5 557 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 CARD9Q9H257 536 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 RPAP3Q9H6T3 665 aaPredicted RBP4.2□□□□□ -1.74
UBR3-202ENST00000392632 RIC8BQ9NVN3 520 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 KANSL3Q9P2N6 904 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 SAE1Q9UBE0 346 aaPredicted RBP4.2□□□□□ -1.74
UBR3-202ENST00000392632 VTI1BQ9UEU0 232 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 TUBGCP4Q9UGJ1 667 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 MAD2L2Q9UI95 211 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 SLC39A10Q9ULF5 831 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 ASAP1Q9ULH1 1129 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 PTPN22Q9Y2R2 807 aa4.2□□□□□ -1.74
UBR3-202ENST00000392632 OVOS2A0A0G2JMS6 1433 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms