RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 PPP1R37O75864 691 aa20.44■□□□□ 0.86
CCDC50-202ENST00000392456 ANP32DO95626 131 aa20.44■□□□□ 0.86
CCDC50-202ENST00000392456 PLS3P13797 630 aa20.44■□□□□ 0.86
CCDC50-202ENST00000392456 NR2F2P24468 414 aa20.44■□□□□ 0.86
CCDC50-202ENST00000392456 MARK3P27448 753 aa20.44■□□□□ 0.86
CCDC50-202ENST00000392456 MAPK4P31152 587 aa20.44■□□□□ 0.86
CCDC50-202ENST00000392456 ADCYAP1R1P41586 468 aa20.44■□□□□ 0.86
CCDC50-202ENST00000392456 RBL2Q08999 1139 aa20.44■□□□□ 0.86
CCDC50-202ENST00000392456 CYP4F22Q6NT55 531 aa20.44■□□□□ 0.86
CCDC50-202ENST00000392456 CCDC155Q8N6L0 562 aa20.44■□□□□ 0.86
CCDC50-202ENST00000392456 DESI2Q9BSY9 194 aa20.44■□□□□ 0.86
CCDC50-202ENST00000392456 STAT5BP51692 787 aa20.43■□□□□ 0.86
CCDC50-202ENST00000392456 MKRN4PQ13434 485 aaPredicted RBP20.43■□□□□ 0.86
CCDC50-202ENST00000392456 MYBPC3Q14896 1274 aa20.43■□□□□ 0.86
CCDC50-202ENST00000392456 SMC1BQ8NDV3 1235 aa20.43■□□□□ 0.86
CCDC50-202ENST00000392456 ZFATQ9P243 1243 aa20.43■□□□□ 0.86
CCDC50-202ENST00000392456 LARSQ9P2J5 1176 aaKnown RBP20.43■□□□□ 0.86
CCDC50-202ENST00000392456 LOXHD1Q8IVV2 1947 aa20.43■□□□□ 0.86
CCDC50-202ENST00000392456 DNAH12Q6ZR08 3092 aa20.43■□□□□ 0.86
CCDC50-202ENST00000392456 K7ENM7 598 aa20.43■□□□□ 0.86
CCDC50-202ENST00000392456 PDXKO00764 312 aa20.43■□□□□ 0.86
CCDC50-202ENST00000392456 SLC16A4O15374 487 aa20.43■□□□□ 0.86
CCDC50-202ENST00000392456 CASP4P49662 377 aa20.43■□□□□ 0.86
CCDC50-202ENST00000392456 CRHR2Q13324 411 aa20.43■□□□□ 0.86
CCDC50-202ENST00000392456 SPRED3Q2MJR0 410 aa20.43■□□□□ 0.86
CCDC50-202ENST00000392456 FOXR2Q6PJQ5 311 aa20.43■□□□□ 0.86
CCDC50-202ENST00000392456 FAM114A1Q8IWE2 563 aa20.43■□□□□ 0.86
CCDC50-202ENST00000392456 CTAGE9A4FU28 777 aa20.42■□□□□ 0.86
CCDC50-202ENST00000392456 EIF3DO15371 548 aaKnown RBP eCLIP20.42■□□□□ 0.86
CCDC50-202ENST00000392456 SMIM24O75264 130 aa20.42■□□□□ 0.86
CCDC50-202ENST00000392456 GYPCP04921 128 aa20.42■□□□□ 0.86
CCDC50-202ENST00000392456 LSP1P33241 339 aa20.42■□□□□ 0.86
CCDC50-202ENST00000392456 DEUP1Q05D60 604 aa20.42■□□□□ 0.86
CCDC50-202ENST00000392456 TTLL4Q14679 1199 aa20.42■□□□□ 0.86
CCDC50-202ENST00000392456 SFMBT2Q5VUG0 894 aa20.42■□□□□ 0.86
CCDC50-202ENST00000392456 TAX1BP1Q86VP1 789 aa20.42■□□□□ 0.86
CCDC50-202ENST00000392456 ZC3H3Q8IXZ2 948 aaKnown RBP20.42■□□□□ 0.86
CCDC50-202ENST00000392456 MIPOL1Q8TD10 442 aa20.42■□□□□ 0.86
CCDC50-202ENST00000392456 SCFD2Q8WU76 684 aa20.42■□□□□ 0.86
CCDC50-202ENST00000392456 DTNBP1Q96EV8 351 aa20.42■□□□□ 0.86
CCDC50-202ENST00000392456 SELENOOQ9BVL4 669 aa20.42■□□□□ 0.86
CCDC50-202ENST00000392456 TRIM7Q9C029 511 aa20.42■□□□□ 0.86
CCDC50-202ENST00000392456 RASSF10A6NK89 507 aa20.42■□□□□ 0.86
CCDC50-202ENST00000392456 TMEM88BA6NKF7 163 aa20.42■□□□□ 0.86
CCDC50-202ENST00000392456 KIF5CO60282 957 aa20.42■□□□□ 0.86
CCDC50-202ENST00000392456 AKAP3O75969 853 aa20.42■□□□□ 0.86
CCDC50-202ENST00000392456 ZNF24P17028 368 aa20.42■□□□□ 0.86
CCDC50-202ENST00000392456 CTGFP29279 349 aa20.42■□□□□ 0.86
CCDC50-202ENST00000392456 FXR1P51114 621 aaKnown RBP eCLIP20.42■□□□□ 0.86
CCDC50-202ENST00000392456 EDRF1Q3B7T1 1238 aa20.42■□□□□ 0.86
CCDC50-202ENST00000392456 ANKRD20A8PQ5CZ79 823 aa20.42■□□□□ 0.86
CCDC50-202ENST00000392456 PPP1R15BQ5SWA1 713 aa20.42■□□□□ 0.86
CCDC50-202ENST00000392456 PRAMEF19Q5SWL8 479 aa20.42■□□□□ 0.86
CCDC50-202ENST00000392456 C17orf50Q8WW18 174 aa20.42■□□□□ 0.86
CCDC50-202ENST00000392456 TYW1Q9NV66 732 aaKnown RBP20.42■□□□□ 0.86
CCDC50-202ENST00000392456 FLRT1Q9NZU1 646 aa20.42■□□□□ 0.86
CCDC50-202ENST00000392456 DIS3Q9Y2L1 958 aaKnown RBP20.42■□□□□ 0.86
CCDC50-202ENST00000392456 GOLGA6L10A6NI86 522 aa20.41■□□□□ 0.86
CCDC50-202ENST00000392456 NOP56O00567 594 aaKnown RBP20.41■□□□□ 0.86
CCDC50-202ENST00000392456 DKC1O60832 514 aaKnown RBP eCLIP20.41■□□□□ 0.86
CCDC50-202ENST00000392456 EPB41P11171 864 aaKnown RBP20.41■□□□□ 0.86
CCDC50-202ENST00000392456 CTCFP49711 727 aaPredicted RBP20.41■□□□□ 0.86
CCDC50-202ENST00000392456 GDAP1L1Q96MZ0 367 aa20.41■□□□□ 0.86
CCDC50-202ENST00000392456 TINF2Q9BSI4 451 aa20.41■□□□□ 0.86
CCDC50-202ENST00000392456 OSBPL7Q9BZF2 842 aa20.41■□□□□ 0.86
CCDC50-202ENST00000392456 ADCY6O43306 1168 aa20.41■□□□□ 0.86
CCDC50-202ENST00000392456 NR3C1P04150 777 aa20.41■□□□□ 0.86
CCDC50-202ENST00000392456 CCDC175P0C221 793 aa20.41■□□□□ 0.86
CCDC50-202ENST00000392456 CASP14P31944 242 aa20.41■□□□□ 0.86
CCDC50-202ENST00000392456 NPTX2P47972 431 aa20.41■□□□□ 0.86
CCDC50-202ENST00000392456 ELF3P78545 371 aaPredicted RBP20.41■□□□□ 0.86
CCDC50-202ENST00000392456 ARHGAP1Q07960 439 aa20.41■□□□□ 0.86
CCDC50-202ENST00000392456 MORN1Q5T089 497 aa20.41■□□□□ 0.86
CCDC50-202ENST00000392456 NUGGCQ68CJ6 796 aa20.41■□□□□ 0.86
CCDC50-202ENST00000392456 HAUS6Q7Z4H7 955 aa20.41■□□□□ 0.86
CCDC50-202ENST00000392456 GLG1Q92896 1179 aa20.41■□□□□ 0.86
CCDC50-202ENST00000392456 TMEM143Q96AN5 459 aa20.41■□□□□ 0.86
CCDC50-202ENST00000392456 NDST4Q9H3R1 872 aa20.41■□□□□ 0.86
CCDC50-202ENST00000392456 SLC5A4Q9NY91 659 aa20.41■□□□□ 0.86
CCDC50-202ENST00000392456 ADGRA3Q8IWK6 1321 aa20.4■□□□□ 0.86
CCDC50-202ENST00000392456 DGAT1O75907 488 aa20.4■□□□□ 0.86
CCDC50-202ENST00000392456 TMEM62Q0P6H9 643 aa20.4■□□□□ 0.86
CCDC50-202ENST00000392456 CCL14Q16627 93 aa20.4■□□□□ 0.86
CCDC50-202ENST00000392456 VWA3BQ502W6 1294 aa20.4■□□□□ 0.86
CCDC50-202ENST00000392456 ZNF467Q7Z7K2 595 aaPredicted RBP20.4■□□□□ 0.86
CCDC50-202ENST00000392456 MYCBPAPQ8TBZ2 947 aa20.4■□□□□ 0.86
CCDC50-202ENST00000392456 CEP63Q96MT8 703 aa20.4■□□□□ 0.86
CCDC50-202ENST00000392456 AGAP3Q96P47 875 aa20.4■□□□□ 0.86
CCDC50-202ENST00000392456 PCDHB13Q9Y5F0 798 aa20.4■□□□□ 0.86
CCDC50-202ENST00000392456 SLC15A5A6NIM6 579 aa20.39■□□□□ 0.86
CCDC50-202ENST00000392456 CCDC169A6NNP5 214 aa20.39■□□□□ 0.86
CCDC50-202ENST00000392456 FGFR1OPO95684 399 aaKnown RBP20.39■□□□□ 0.86
CCDC50-202ENST00000392456 CCDC15Q0P6D6 951 aa20.39■□□□□ 0.86
CCDC50-202ENST00000392456 ZNF569Q5MCW4 686 aa20.39■□□□□ 0.86
CCDC50-202ENST00000392456 PPP4R3CPQ6ZMV5 832 aa20.39■□□□□ 0.86
CCDC50-202ENST00000392456 CCT8L2Q96SF2 557 aa20.39■□□□□ 0.86
CCDC50-202ENST00000392456 LZTFL1Q9NQ48 299 aa20.39■□□□□ 0.86
CCDC50-202ENST00000392456 CETN3O15182 167 aa20.39■□□□□ 0.85
CCDC50-202ENST00000392456 MPP3Q13368 585 aa20.39■□□□□ 0.85
CCDC50-202ENST00000392456 MTF1Q14872 753 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms