RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 PARP2Q9UGN5 583 aa12.52□□□□□ -0.41
IGHV4-28-201ENST00000390612 C2orf16Q68DN1 1984 aa12.51□□□□□ -0.41
IGHV4-28-201ENST00000390612 A0A087X0B3 334 aa12.51□□□□□ -0.41
IGHV4-28-201ENST00000390612 TNFRSF10AO00220 468 aa12.51□□□□□ -0.41
IGHV4-28-201ENST00000390612 MBTPS2O43462 519 aa12.51□□□□□ -0.41
IGHV4-28-201ENST00000390612 PPP6R2O75170 966 aa12.51□□□□□ -0.41
IGHV4-28-201ENST00000390612 YEATS4O95619 227 aa12.51□□□□□ -0.41
IGHV4-28-201ENST00000390612 IL9P15248 144 aa12.51□□□□□ -0.41
IGHV4-28-201ENST00000390612 LIG1P18858 919 aa12.51□□□□□ -0.41
IGHV4-28-201ENST00000390612 SCP2P22307 547 aa12.51□□□□□ -0.41
IGHV4-28-201ENST00000390612 GRM5P41594 1212 aa12.51□□□□□ -0.41
IGHV4-28-201ENST00000390612 SMTNP53814 917 aa12.51□□□□□ -0.41
IGHV4-28-201ENST00000390612 RBM10P98175 930 aaKnown RBP12.51□□□□□ -0.41
IGHV4-28-201ENST00000390612 CACNB1Q02641 598 aaPredicted RBP12.51□□□□□ -0.41
IGHV4-28-201ENST00000390612 SMAD4Q13485 552 aaKnown RBP12.51□□□□□ -0.41
IGHV4-28-201ENST00000390612 PKP1Q13835 747 aa12.51□□□□□ -0.41
IGHV4-28-201ENST00000390612 SMAD2Q15796 467 aaKnown RBP12.51□□□□□ -0.41
IGHV4-28-201ENST00000390612 ZPBP2Q6X784 338 aa12.51□□□□□ -0.41
IGHV4-28-201ENST00000390612 CD320Q9NPF0 282 aa12.51□□□□□ -0.41
IGHV4-28-201ENST00000390612 TFIP11Q9UBB9 837 aaKnown RBP12.51□□□□□ -0.41
IGHV4-28-201ENST00000390612 CD207Q9UJ71 328 aa12.51□□□□□ -0.41
IGHV4-28-201ENST00000390612 C19orf67A6NJJ6 358 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 F8W810 466 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 SPTLC2O15270 562 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 MEFVO15553 781 aaPredicted RBP12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 CLASP2O75122 1294 aaKnown RBP12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 TOM1L1O75674 476 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 F13A1P00488 732 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 PIGRP01833 764 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 SOD2P04179 222 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 MCF2P10911 925 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 OR1G1P47890 313 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 NDUFV1P49821 464 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 TUSC3Q13454 348 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 PTPN14Q15678 1187 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 KIAA0319Q5VV43 1072 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 SYCE2Q6PIF2 218 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 MPZL3Q6UWV2 235 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 EP400NLQ6ZTU2 488 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 TAS1R1Q7RTX1 841 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 HAUS6Q7Z4H7 955 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 APBB1IPQ7Z5R6 666 aaPredicted RBP12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 GPR65Q8IYL9 337 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 CEP120Q8N960 986 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 SLC22A17Q8WUG5 538 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 AUTS2Q8WXX7 1259 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 SUSD6Q92537 303 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 DNAJC19Q96DA6 116 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 ZBTB45Q96K62 511 aaPredicted RBP12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 ZNF396Q96N95 335 aaPredicted RBP12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 PPP1R10Q96QC0 940 aaKnown RBP12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 HERC2P3Q9BVR0 1158 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 COLEC11Q9BWP8 271 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 HAPLN2Q9GZV7 340 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 S1PR5Q9H228 398 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 ST6GALNAC4Q9H4F1 302 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 PARVGQ9HBI0 331 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 CHST7Q9NS84 486 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 CCDC39Q9UFE4 941 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 PRKAG3Q9UGI9 489 aa12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 BARX2Q9UMQ3 279 aaPredicted RBP12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 PRG3Q9Y2Y8 225 aaPredicted RBP12.5□□□□□ -0.41
IGHV4-28-201ENST00000390612 DOCK8Q8NF50 2099 aa12.49□□□□□ -0.41
IGHV4-28-201ENST00000390612 MYMKA6NI61 221 aa12.49□□□□□ -0.41
IGHV4-28-201ENST00000390612 H0YCG3 227 aa12.49□□□□□ -0.41
IGHV4-28-201ENST00000390612 THP07101 528 aa12.49□□□□□ -0.41
IGHV4-28-201ENST00000390612 GTF2BQ00403 316 aa12.49□□□□□ -0.41
IGHV4-28-201ENST00000390612 MCL1Q07820 350 aa12.49□□□□□ -0.41
IGHV4-28-201ENST00000390612 DHX8Q14562 1220 aaKnown RBP12.49□□□□□ -0.41
IGHV4-28-201ENST00000390612 BMS1Q14692 1282 aaKnown RBP12.49□□□□□ -0.41
IGHV4-28-201ENST00000390612 STK38Q15208 465 aa12.49□□□□□ -0.41
IGHV4-28-201ENST00000390612 TMEM132AQ24JP5 1023 aa12.49□□□□□ -0.41
IGHV4-28-201ENST00000390612 AXDND1Q5T1B0 1012 aaPredicted RBP12.49□□□□□ -0.41
IGHV4-28-201ENST00000390612 RRAGBQ5VZM2 374 aa12.49□□□□□ -0.41
IGHV4-28-201ENST00000390612 ATL3Q6DD88 541 aa12.49□□□□□ -0.41
IGHV4-28-201ENST00000390612 ANKRD54Q6NXT1 300 aa12.49□□□□□ -0.41
IGHV4-28-201ENST00000390612 RPS6KC1Q96S38 1066 aa12.49□□□□□ -0.41
IGHV4-28-201ENST00000390612 PAAF1Q9BRP4 392 aa12.49□□□□□ -0.41
IGHV4-28-201ENST00000390612 STRA6Q9BX79 667 aa12.49□□□□□ -0.41
IGHV4-28-201ENST00000390612 GPR62Q9BZJ7 368 aa12.49□□□□□ -0.41
IGHV4-28-201ENST00000390612 RXFP1Q9HBX9 757 aa12.49□□□□□ -0.41
IGHV4-28-201ENST00000390612 CACNG4Q9UBN1 327 aa12.49□□□□□ -0.41
IGHV4-28-201ENST00000390612 FAM50BQ9Y247 325 aa12.49□□□□□ -0.41
IGHV4-28-201ENST00000390612 GDAQ9Y2T3 454 aa12.49□□□□□ -0.41
IGHV4-28-201ENST00000390612 ZDHHC9Q9Y397 364 aa12.49□□□□□ -0.41
IGHV4-28-201ENST00000390612 HCFC2Q9Y5Z7 792 aa12.49□□□□□ -0.41
IGHV4-28-201ENST00000390612 DENND4AQ7Z401 1863 aa12.48□□□□□ -0.41
IGHV4-28-201ENST00000390612 TRAK2O60296 914 aa12.48□□□□□ -0.41
IGHV4-28-201ENST00000390612 FAM189A1O60320 539 aa12.48□□□□□ -0.41
IGHV4-28-201ENST00000390612 NR1I2O75469 434 aa12.48□□□□□ -0.41
IGHV4-28-201ENST00000390612 PPP1R37O75864 691 aa12.48□□□□□ -0.41
IGHV4-28-201ENST00000390612 FAM13AO94988 1023 aa12.48□□□□□ -0.41
IGHV4-28-201ENST00000390612 HSP90AA1P07900 732 aaKnown RBP12.48□□□□□ -0.41
IGHV4-28-201ENST00000390612 CNPP09543 421 aaKnown RBP12.48□□□□□ -0.41
IGHV4-28-201ENST00000390612 KCNE1P15382 129 aa12.48□□□□□ -0.41
IGHV4-28-201ENST00000390612 HOXB8P17481 243 aaPredicted RBP12.48□□□□□ -0.41
IGHV4-28-201ENST00000390612 DSG1Q02413 1049 aa12.48□□□□□ -0.41
IGHV4-28-201ENST00000390612 ZP2Q05996 745 aa12.48□□□□□ -0.41
IGHV4-28-201ENST00000390612 STRN3Q13033 797 aa12.48□□□□□ -0.41
IGHV4-28-201ENST00000390612 HSP90AA2PQ14568 343 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms