RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 CNGA3Q16281 694 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 DGKDQ16760 1214 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 UGP2Q16851 508 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 PROSER3Q2NL68 480 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 AASDHQ4L235 1098 aaPredicted RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 PDCD4Q53EL6 469 aaKnown RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 NOM1Q5C9Z4 860 aaKnown RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 EMC4Q5J8M3 183 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 TMEM201Q5SNT2 666 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 WASHC2DQ5SRD0 308 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 RASIP1Q5U651 963 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 PRAMEF17Q5VTA0 474 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 CD276Q5ZPR3 534 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 STEAP3Q658P3 488 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 ZNF776Q68DI1 518 aaPredicted RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 KRT40Q6A162 431 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 NAPEPLDQ6IQ20 393 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 ALKBH2Q6NS38 261 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 CYP4F22Q6NT55 531 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 TPTE2Q6XPS3 522 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 SLC39A5Q6ZMH5 540 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 CATSPERGQ6ZRH7 1159 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 SRGAP1Q7Z6B7 1085 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 PIP4P1Q86T03 277 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 PEG10Q86TG7 708 aaKnown RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 CDC20BQ86Y33 519 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 CPNE8Q86YQ8 564 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 RASAL3Q86YV0 1011 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 ERC1Q8IUD2 1116 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 ANKMY2Q8IV38 441 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 TEX2Q8IWB9 1127 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 ZZZ3Q8IYH5 903 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 IFNL3Q8IZI9 196 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 BCL6BQ8N143 479 aaPredicted RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 Q8N1Y9 231 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 PARP8Q8N3A8 854 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 RFLNBQ8N5W9 214 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 LMNTD1Q8N9Z9 388 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 ZNF548Q8NEK5 533 aaPredicted RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 ELP5Q8TE02 316 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 GCDHQ92947 438 aaPredicted RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 MIB2Q96AX9 1013 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 FBXO17Q96EF6 278 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 PHF21BQ96EK2 531 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 C1orf159Q96HA4 380 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 DDRGK1Q96HY6 314 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 ZNF845Q96IR2 970 aaPredicted RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 ZC3H10Q96K80 434 aaKnown RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 C5orf34Q96MH7 638 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 NLRP4Q96MN2 994 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 FCRL3Q96P31 734 aaPredicted RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 HAPLN3Q96S86 360 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 GPHA2Q96T91 129 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 FAM129BQ96TA1 746 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 EPYCQ99645 322 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 KIF2CQ99661 725 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 FAM118BQ9BPY3 351 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 CPPED1Q9BRF8 314 aaPredicted RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 PDCD2LQ9BRP1 358 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 TRMT61BQ9BVS5 477 aaKnown RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 RBM4Q9BWF3 364 aaKnown RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 SCRT1Q9BWW7 348 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 TRIM55Q9BYV6 548 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 CPEB1Q9BZB8 566 aaKnown RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 TM6SF1Q9BZW5 370 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 HAPLN2Q9GZV7 340 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 MYLK2Q9H1R3 596 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 ABHD16BQ9H3Z7 469 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 RETREG1Q9H6L5 497 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 SDF2L1Q9HCN8 221 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 GALNT9Q9HCQ5 603 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 NPHS2Q9NP85 383 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 CHST11Q9NPF2 352 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 ACSS2Q9NR19 701 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 THSD1Q9NS62 852 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 TMEM248Q9NWD8 314 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 BTG4Q9NY30 223 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 OGFRQ9NZT2 677 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 SH3BP4Q9P0V3 963 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 PAK5Q9P286 719 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 Q9UFV3 132 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 SERGEFQ9UGK8 458 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 KLHL3Q9UH77 587 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 FBXL21Q9UKT6 434 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 PCDHA7Q9UN72 937 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 POLIQ9UNA4 740 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 WDR3Q9UNX4 943 aaKnown RBP eCLIP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 CLCA2Q9UQC9 943 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 HDAC5Q9UQL6 1122 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 AKAP2Q9Y2D5 859 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 DLGAP4Q9Y2H0 992 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 MED16Q9Y2X0 877 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 VWA7Q9Y334 891 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 SLC6A5Q9Y345 797 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 SF3B6Q9Y3B4 125 aaKnown RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 CTDP1Q9Y5B0 961 aaPredicted RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 FHOD1Q9Y613 1164 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 HS3ST3B1Q9Y662 390 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 RNF215Q9Y6U7 377 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 DMBT1Q9UGM3 2413 aaPredicted RBP-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms