RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 WRAP73Q9P2S5 460 aaPredicted RBP19.34■□□□□ 0.69
HMGN1-203ENST00000380748 FRYQ5TBA9 3013 aa19.34■□□□□ 0.69
HMGN1-203ENST00000380748 CEP295Q9C0D2 2601 aa19.34■□□□□ 0.69
HMGN1-203ENST00000380748 CCDC196A0A1B0GTZ2 297 aa19.33■□□□□ 0.68
HMGN1-203ENST00000380748 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.33■□□□□ 0.68
HMGN1-203ENST00000380748 NCAM2O15394 837 aa19.33■□□□□ 0.68
HMGN1-203ENST00000380748 AKAP5P24588 427 aa19.33■□□□□ 0.68
HMGN1-203ENST00000380748 RNF20Q5VTR2 975 aa19.33■□□□□ 0.68
HMGN1-203ENST00000380748 NOTUMQ6P988 496 aa19.33■□□□□ 0.68
HMGN1-203ENST00000380748 ZNF852Q6ZMS4 543 aa19.33■□□□□ 0.68
HMGN1-203ENST00000380748 RASEFQ8IZ41 740 aa19.33■□□□□ 0.68
HMGN1-203ENST00000380748 CCDC148Q8NFR7 591 aa19.33■□□□□ 0.68
HMGN1-203ENST00000380748 HASPINQ8TF76 798 aa19.33■□□□□ 0.68
HMGN1-203ENST00000380748 PAAF1Q9BRP4 392 aa19.33■□□□□ 0.68
HMGN1-203ENST00000380748 FAM126AQ9BYI3 521 aaPredicted RBP19.33■□□□□ 0.68
HMGN1-203ENST00000380748 PLA2G2FQ9BZM2 168 aa19.33■□□□□ 0.68
HMGN1-203ENST00000380748 CSRNP2Q9H175 543 aa19.33■□□□□ 0.68
HMGN1-203ENST00000380748 RAB23Q9ULC3 237 aa19.33■□□□□ 0.68
HMGN1-203ENST00000380748 GIT1Q9Y2X7 761 aa19.33■□□□□ 0.68
HMGN1-203ENST00000380748 F5P12259 2224 aa19.33■□□□□ 0.68
HMGN1-203ENST00000380748 SF3B1O75533 1304 aaKnown RBP eCLIP19.32■□□□□ 0.684e-6■□□□□ 8.6
HMGN1-203ENST00000380748 ADAM12O43184 909 aa19.32■□□□□ 0.68
HMGN1-203ENST00000380748 XYLBO75191 536 aa19.32■□□□□ 0.68
HMGN1-203ENST00000380748 TADA2AO75478 443 aa19.32■□□□□ 0.68
HMGN1-203ENST00000380748 AXLP30530 894 aa19.32■□□□□ 0.68
HMGN1-203ENST00000380748 HOXA9P31269 272 aa19.32■□□□□ 0.68
HMGN1-203ENST00000380748 QARSP47897 775 aaKnown RBP19.32■□□□□ 0.68
HMGN1-203ENST00000380748 ADCY1Q08828 1119 aa19.32■□□□□ 0.68
HMGN1-203ENST00000380748 LAIR1Q6GTX8 287 aa19.32■□□□□ 0.68
HMGN1-203ENST00000380748 FERMT3Q86UX7 667 aa19.32■□□□□ 0.68
HMGN1-203ENST00000380748 SLC7A14Q8TBB6 771 aa19.32■□□□□ 0.68
HMGN1-203ENST00000380748 CCDC51Q96ER9 411 aa19.32■□□□□ 0.68
HMGN1-203ENST00000380748 KLK14Q9P0G3 267 aa19.32■□□□□ 0.68
HMGN1-203ENST00000380748 FAM208BQ5VWN6 2430 aa19.32■□□□□ 0.68
HMGN1-203ENST00000380748 CYP3A7-CYP3A51PA0A087WV96 503 aa19.31■□□□□ 0.68
HMGN1-203ENST00000380748 CYP3A7P24462 503 aa19.31■□□□□ 0.68
HMGN1-203ENST00000380748 RFC5P40937 340 aa19.31■□□□□ 0.68
HMGN1-203ENST00000380748 GRIK3Q13003 919 aa19.31■□□□□ 0.68
HMGN1-203ENST00000380748 HSP90AA2PQ14568 343 aaPredicted RBP19.31■□□□□ 0.68
HMGN1-203ENST00000380748 EMC2Q15006 297 aa19.31■□□□□ 0.68
HMGN1-203ENST00000380748 PSMD5Q16401 504 aa19.31■□□□□ 0.68
HMGN1-203ENST00000380748 CEP57Q86XR8 500 aa19.31■□□□□ 0.68
HMGN1-203ENST00000380748 ZNF687Q8N1G0 1237 aa19.31■□□□□ 0.68
HMGN1-203ENST00000380748 LNX1Q8TBB1 728 aaPredicted RBP19.31■□□□□ 0.68
HMGN1-203ENST00000380748 PIK3R5Q8WYR1 880 aa19.31■□□□□ 0.68
HMGN1-203ENST00000380748 TTPALQ9BTX7 342 aa19.31■□□□□ 0.68
HMGN1-203ENST00000380748 TRIM6Q9C030 488 aaPredicted RBP19.31■□□□□ 0.68
HMGN1-203ENST00000380748 DNMT3BQ9UBC3 853 aaKnown RBP19.31■□□□□ 0.68
HMGN1-203ENST00000380748 ECI2O75521 394 aa19.3■□□□□ 0.68
HMGN1-203ENST00000380748 CPA1P15085 419 aa19.3■□□□□ 0.68
HMGN1-203ENST00000380748 KCNA4P22459 653 aa19.3■□□□□ 0.68
HMGN1-203ENST00000380748 PTENP60484 403 aa19.3■□□□□ 0.68
HMGN1-203ENST00000380748 AKAP17AQ02040 695 aaKnown RBP19.3■□□□□ 0.68
HMGN1-203ENST00000380748 PABPC1LQ4VXU2 614 aaKnown RBP19.3■□□□□ 0.68
HMGN1-203ENST00000380748 POTEHQ6S545 545 aa19.3■□□□□ 0.68
HMGN1-203ENST00000380748 PRR23BQ6ZRT6 265 aa19.3■□□□□ 0.68
HMGN1-203ENST00000380748 TCP11Q8WWU5 503 aa19.3■□□□□ 0.68
HMGN1-203ENST00000380748 SLC26A6Q9BXS9 759 aa19.3■□□□□ 0.68
HMGN1-203ENST00000380748 KCNH3Q9ULD8 1083 aa19.3■□□□□ 0.68
HMGN1-203ENST00000380748 NDRG2Q9UN36 371 aaKnown RBP19.3■□□□□ 0.68
HMGN1-203ENST00000380748 MRPS17Q9Y2R5 130 aaKnown RBP19.3■□□□□ 0.68
HMGN1-203ENST00000380748 NID2Q14112 1375 aa19.3■□□□□ 0.68
HMGN1-203ENST00000380748 INO80B-WBP1J3KQ70 363 aa19.29■□□□□ 0.68
HMGN1-203ENST00000380748 ASAP2O43150 1006 aa19.29■□□□□ 0.68
HMGN1-203ENST00000380748 GDF9O60383 454 aa19.29■□□□□ 0.68
HMGN1-203ENST00000380748 KIF4AO95239 1232 aa19.29■□□□□ 0.68
HMGN1-203ENST00000380748 RETP07949 1114 aa19.29■□□□□ 0.68
HMGN1-203ENST00000380748 ARF4P18085 180 aaPredicted RBP19.29■□□□□ 0.68
HMGN1-203ENST00000380748 NLRP5P59047 1200 aa19.29■□□□□ 0.68
HMGN1-203ENST00000380748 FGD1P98174 961 aa19.29■□□□□ 0.68
HMGN1-203ENST00000380748 AMHR2Q16671 573 aa19.29■□□□□ 0.68
HMGN1-203ENST00000380748 AXDND1Q5T1B0 1012 aaPredicted RBP19.29■□□□□ 0.68
HMGN1-203ENST00000380748 FAM171A1Q5VUB5 890 aa19.29■□□□□ 0.68
HMGN1-203ENST00000380748 CDR2LQ86X02 465 aaPredicted RBP19.29■□□□□ 0.68
HMGN1-203ENST00000380748 EXOC8Q8IYI6 725 aa19.29■□□□□ 0.68
HMGN1-203ENST00000380748 HACE1Q8IYU2 909 aa19.29■□□□□ 0.68
HMGN1-203ENST00000380748 CELF5Q8N6W0 485 aaKnown RBP19.29■□□□□ 0.68
HMGN1-203ENST00000380748 MCRS1Q96EZ8 462 aa19.29■□□□□ 0.68
HMGN1-203ENST00000380748 CHRDQ9H2X0 955 aa19.29■□□□□ 0.68
HMGN1-203ENST00000380748 SEMA4GQ9NTN9 838 aa19.29■□□□□ 0.68
HMGN1-203ENST00000380748 VAV3Q9UKW4 847 aa19.29■□□□□ 0.68
HMGN1-203ENST00000380748 PPME1Q9Y570 386 aa19.29■□□□□ 0.68
HMGN1-203ENST00000380748 ARID2Q68CP9 1835 aa19.29■□□□□ 0.68
HMGN1-203ENST00000380748 VWA8A3KMH1 1905 aa19.28■□□□□ 0.68
HMGN1-203ENST00000380748 CASTOR2A6NHX0 329 aa19.28■□□□□ 0.68
HMGN1-203ENST00000380748 B4GALT5O43286 388 aa19.28■□□□□ 0.68
HMGN1-203ENST00000380748 SLC37A4O43826 429 aa19.28■□□□□ 0.68
HMGN1-203ENST00000380748 LRP3O75074 770 aa19.28■□□□□ 0.68
HMGN1-203ENST00000380748 NPTXRO95502 500 aa19.28■□□□□ 0.68
HMGN1-203ENST00000380748 POU2F2P09086 479 aa19.28■□□□□ 0.68
HMGN1-203ENST00000380748 NRLP54845 237 aa19.28■□□□□ 0.68
HMGN1-203ENST00000380748 MBTD1Q05BQ5 628 aa19.28■□□□□ 0.68
HMGN1-203ENST00000380748 PCBP1Q15365 356 aaKnown RBP eCLIP19.28■□□□□ 0.68
HMGN1-203ENST00000380748 NTRK3Q16288 839 aa19.28■□□□□ 0.68
HMGN1-203ENST00000380748 SLC5A9Q2M3M2 681 aa19.28■□□□□ 0.68
HMGN1-203ENST00000380748 TSGA10IPQ3SY00 556 aa19.28■□□□□ 0.68
HMGN1-203ENST00000380748 TANGO2Q6ICL3 276 aa19.28■□□□□ 0.68
HMGN1-203ENST00000380748 PRR23CQ6ZRP0 262 aa19.28■□□□□ 0.68
HMGN1-203ENST00000380748 BRF1Q92994 677 aa19.28■□□□□ 0.68
HMGN1-203ENST00000380748 RNF26Q9BY78 433 aaPredicted RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms