RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 SNTG2Q9NY99 539 aa18.63■□□□□ 0.57
SMN2-201ENST00000380741 USP20Q9Y2K6 914 aa18.63■□□□□ 0.57
SMN2-201ENST00000380741 CASTOR2A6NHX0 329 aa18.62■□□□□ 0.57
SMN2-201ENST00000380741 PTGESO14684 152 aa18.62■□□□□ 0.57
SMN2-201ENST00000380741 TGM5O43548 720 aa18.62■□□□□ 0.57
SMN2-201ENST00000380741 TADA2AO75478 443 aa18.62■□□□□ 0.57
SMN2-201ENST00000380741 PRKCBP05771 671 aa18.62■□□□□ 0.57
SMN2-201ENST00000380741 RPL17P18621 184 aaKnown RBP18.62■□□□□ 0.57
SMN2-201ENST00000380741 LIG1P18858 919 aa18.62■□□□□ 0.57
SMN2-201ENST00000380741 RBM25P49756 843 aaKnown RBP18.62■□□□□ 0.57
SMN2-201ENST00000380741 NUBP1P53384 320 aa18.62■□□□□ 0.57
SMN2-201ENST00000380741 HMGN5P82970 282 aaKnown RBP18.62■□□□□ 0.57
SMN2-201ENST00000380741 TUSC3Q13454 348 aa18.62■□□□□ 0.57
SMN2-201ENST00000380741 TDGQ13569 410 aa18.62■□□□□ 0.57
SMN2-201ENST00000380741 NBR1Q14596 966 aa18.62■□□□□ 0.57
SMN2-201ENST00000380741 ECM1Q16610 540 aa18.62■□□□□ 0.57
SMN2-201ENST00000380741 MAPK6Q16659 721 aa18.62■□□□□ 0.57
SMN2-201ENST00000380741 TMEM132AQ24JP5 1023 aa18.62■□□□□ 0.57
SMN2-201ENST00000380741 HAUS3Q68CZ6 603 aa18.62■□□□□ 0.57
SMN2-201ENST00000380741 CYP26C1Q6V0L0 522 aa18.62■□□□□ 0.57
SMN2-201ENST00000380741 NOSTRINQ8IVI9 506 aa18.62■□□□□ 0.57
SMN2-201ENST00000380741 GPR65Q8IYL9 337 aa18.62■□□□□ 0.57
SMN2-201ENST00000380741 ZNF707Q96C28 371 aaPredicted RBP18.62■□□□□ 0.57
SMN2-201ENST00000380741 KIFC3Q9BVG8 833 aa18.62■□□□□ 0.57
SMN2-201ENST00000380741 CXCL16Q9H2A7 254 aa18.62■□□□□ 0.57
SMN2-201ENST00000380741 MFSD1Q9H3U5 465 aa18.62■□□□□ 0.57
SMN2-201ENST00000380741 FNIP2Q9P278 1114 aa18.62■□□□□ 0.57
SMN2-201ENST00000380741 CLUHO75153 1309 aa18.62■□□□□ 0.57
SMN2-201ENST00000380741 TRIP11Q15643 1979 aa18.62■□□□□ 0.57
SMN2-201ENST00000380741 CFAP54Q96N23 3096 aa18.61■□□□□ 0.57
SMN2-201ENST00000380741 VWA8A3KMH1 1905 aa18.61■□□□□ 0.57
SMN2-201ENST00000380741 SF3B1O75533 1304 aaKnown RBP eCLIP18.61■□□□□ 0.57
SMN2-201ENST00000380741 H0Y858 1186 aa18.61■□□□□ 0.57
SMN2-201ENST00000380741 ACKR2O00590 384 aa18.61■□□□□ 0.57
SMN2-201ENST00000380741 GALR2O43603 387 aaPredicted RBP18.61■□□□□ 0.57
SMN2-201ENST00000380741 RECQL4O94761 1208 aa18.61■□□□□ 0.57
SMN2-201ENST00000380741 MUTP22033 750 aa18.61■□□□□ 0.57
SMN2-201ENST00000380741 NAMPTP43490 491 aa18.61■□□□□ 0.57
SMN2-201ENST00000380741 TRAPPC10P48553 1259 aa18.61■□□□□ 0.57
SMN2-201ENST00000380741 GNL2Q13823 731 aaKnown RBP18.61■□□□□ 0.57
SMN2-201ENST00000380741 RTP2Q5QGT7 225 aa18.61■□□□□ 0.57
SMN2-201ENST00000380741 ASTLQ6HA08 431 aaPredicted RBP18.61■□□□□ 0.57
SMN2-201ENST00000380741 PRSS55Q6UWB4 352 aaPredicted RBP18.61■□□□□ 0.57
SMN2-201ENST00000380741 C4orf32Q8N8J7 132 aa18.61■□□□□ 0.57
SMN2-201ENST00000380741 FAM184AQ8NB25 1140 aa18.61■□□□□ 0.57
SMN2-201ENST00000380741 DEPTORQ8TB45 409 aa18.61■□□□□ 0.57
SMN2-201ENST00000380741 HASPINQ8TF76 798 aa18.61■□□□□ 0.57
SMN2-201ENST00000380741 HDAC7Q8WUI4 952 aa18.61■□□□□ 0.57
SMN2-201ENST00000380741 SMG7Q92540 1137 aaKnown RBP18.61■□□□□ 0.57
SMN2-201ENST00000380741 STAMQ92783 540 aa18.61■□□□□ 0.57
SMN2-201ENST00000380741 ATOH1Q92858 354 aaPredicted RBP18.61■□□□□ 0.57
SMN2-201ENST00000380741 PLEKHA4Q9H4M7 779 aa18.61■□□□□ 0.57
SMN2-201ENST00000380741 POLD4Q9HCU8 107 aa18.61■□□□□ 0.57
SMN2-201ENST00000380741 DUSP12Q9UNI6 340 aa18.61■□□□□ 0.57
SMN2-201ENST00000380741 DOCK6Q96HP0 2047 aa18.61■□□□□ 0.57
SMN2-201ENST00000380741 ZFHX2Q9C0A1 2572 aaPredicted RBP18.6■□□□□ 0.57
SMN2-201ENST00000380741 KIF4AO95239 1232 aa18.6■□□□□ 0.57
SMN2-201ENST00000380741 PAPLNO95428 1278 aa18.6■□□□□ 0.57
SMN2-201ENST00000380741 C1RP00736 705 aa18.6■□□□□ 0.57
SMN2-201ENST00000380741 GBP2P32456 591 aaPredicted RBP18.6■□□□□ 0.57
SMN2-201ENST00000380741 CCT6AP40227 531 aaKnown RBP18.6■□□□□ 0.57
SMN2-201ENST00000380741 FXR2P51116 673 aaKnown RBP eCLIP18.6■□□□□ 0.57
SMN2-201ENST00000380741 CREMQ03060 361 aa18.6■□□□□ 0.57
SMN2-201ENST00000380741 PPP2R5AQ15172 486 aa18.6■□□□□ 0.57
SMN2-201ENST00000380741 NAB2Q15742 525 aa18.6■□□□□ 0.57
SMN2-201ENST00000380741 EEF1DP3Q658K8 133 aa18.6■□□□□ 0.57
SMN2-201ENST00000380741 LILRA6Q6PI73 481 aa18.6■□□□□ 0.57
SMN2-201ENST00000380741 ZSCAN31Q96LW9 406 aaPredicted RBP18.6■□□□□ 0.57
SMN2-201ENST00000380741 ADPGKQ9BRR6 497 aa18.6■□□□□ 0.57
SMN2-201ENST00000380741 IRF2BPLQ9H1B7 796 aa18.6■□□□□ 0.57
SMN2-201ENST00000380741 BHMT2Q9H2M3 363 aa18.6■□□□□ 0.57
SMN2-201ENST00000380741 IGSF9Q9P2J2 1179 aa18.6■□□□□ 0.57
SMN2-201ENST00000380741 LRWD1Q9UFC0 647 aa18.6■□□□□ 0.57
SMN2-201ENST00000380741 NOL7Q9UMY1 257 aaKnown RBP18.6■□□□□ 0.57
SMN2-201ENST00000380741 THP07101 528 aa18.59■□□□□ 0.57
SMN2-201ENST00000380741 CWF19L1Q69YN2 538 aaKnown RBP18.59■□□□□ 0.57
SMN2-201ENST00000380741 MYADMQ96S97 322 aa18.59■□□□□ 0.57
SMN2-201ENST00000380741 KIF2CQ99661 725 aa18.59■□□□□ 0.57
SMN2-201ENST00000380741 NT5C3AQ9H0P0 336 aa18.59■□□□□ 0.57
SMN2-201ENST00000380741 PIDD1Q9HB75 910 aa18.59■□□□□ 0.57
SMN2-201ENST00000380741 SH2B1Q9NRF2 756 aaPredicted RBP18.59■□□□□ 0.57
SMN2-201ENST00000380741 ZDHHC7Q9NXF8 308 aa18.59■□□□□ 0.57
SMN2-201ENST00000380741 KIAA1024Q9UPX6 916 aa18.59■□□□□ 0.57
SMN2-201ENST00000380741 NARSO43776 548 aaKnown RBP18.58■□□□□ 0.56
SMN2-201ENST00000380741 CLCN5P51795 746 aa18.58■□□□□ 0.56
SMN2-201ENST00000380741 NT5DC1Q5TFE4 455 aa18.58■□□□□ 0.56
SMN2-201ENST00000380741 FAM171A1Q5VUB5 890 aa18.58■□□□□ 0.56
SMN2-201ENST00000380741 FLCNQ8NFG4 579 aa18.58■□□□□ 0.56
SMN2-201ENST00000380741 RSAD2Q8WXG1 361 aa18.58■□□□□ 0.56
SMN2-201ENST00000380741 KIFAP3Q92845 792 aa18.58■□□□□ 0.56
SMN2-201ENST00000380741 IFT74Q96LB3 600 aa18.58■□□□□ 0.56
SMN2-201ENST00000380741 TTPALQ9BTX7 342 aa18.58■□□□□ 0.56
SMN2-201ENST00000380741 PRKD2Q9BZL6 878 aa18.58■□□□□ 0.56
SMN2-201ENST00000380741 DDX19AQ9NUU7 478 aaKnown RBP18.58■□□□□ 0.56
SMN2-201ENST00000380741 EPS15L1Q9UBC2 864 aa18.58■□□□□ 0.56
SMN2-201ENST00000380741 GDAQ9Y2T3 454 aa18.58■□□□□ 0.56
SMN2-201ENST00000380741 NPR3P17342 541 aa18.57■□□□□ 0.56
SMN2-201ENST00000380741 U2AF2P26368 475 aaKnown RBP eCLIP18.57■□□□□ 0.564e-10■■■□□ 18.5
SMN2-201ENST00000380741 TOB1P50616 345 aaPredicted RBP18.57■□□□□ 0.56
SMN2-201ENST00000380741 EFNA5P52803 228 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms