RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 CATSPER3Q86XQ3 398 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 C7orf31Q8N865 590 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 FAM193BQ96PV7 902 aaPredicted RBP18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 THTPAQ9BU02 230 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 ADNPQ9H2P0 1102 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 HEY1Q9Y5J3 304 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 CYP2D7A0A087X1C5 515 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 B2RBV5 119 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 PYGLP06737 847 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 FCER1AP12319 257 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 PRUNE1Q86TP1 453 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 PRPF38AQ8NAV1 312 aaKnown RBP18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 DDHD1Q8NEL9 900 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 FSD1LQ9BXM9 530 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 BFARQ9NZS9 450 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 PADI6Q6TGC4 694 aa18.04■□□□□ 0.48
COL4A3BP-203ENST00000380494 AURKCQ9UQB9 309 aa18.04■□□□□ 0.48
COL4A3BP-203ENST00000380494 SERPINB1P30740 379 aa18.04■□□□□ 0.48
COL4A3BP-203ENST00000380494 TNFAIP2Q03169 654 aa18.04■□□□□ 0.48
COL4A3BP-203ENST00000380494 TBC1D10BQ4KMP7 808 aaPredicted RBP18.04■□□□□ 0.48
COL4A3BP-203ENST00000380494 EP400NLQ6ZTU2 488 aa18.04■□□□□ 0.48
COL4A3BP-203ENST00000380494 MAGEB18Q96M61 343 aa18.04■□□□□ 0.48
COL4A3BP-203ENST00000380494 ZNF212Q9UDV6 495 aa18.04■□□□□ 0.48
COL4A3BP-203ENST00000380494 TRIM10Q9UDY6 481 aa18.04■□□□□ 0.48
COL4A3BP-203ENST00000380494 ZCWPW2Q504Y3 356 aa18.04■□□□□ 0.48
COL4A3BP-203ENST00000380494 MANSC1Q9H8J5 431 aa18.04■□□□□ 0.48
COL4A3BP-203ENST00000380494 L1RE1Q9UN81 338 aa18.04■□□□□ 0.48
COL4A3BP-203ENST00000380494 ANGPT2O15123 496 aa18.04■□□□□ 0.48
COL4A3BP-203ENST00000380494 SRP72O76094 671 aaKnown RBP18.04■□□□□ 0.48
COL4A3BP-203ENST00000380494 HSPA2P54652 639 aa18.04■□□□□ 0.48
COL4A3BP-203ENST00000380494 TSTA3Q13630 321 aaPredicted RBP18.04■□□□□ 0.48
COL4A3BP-203ENST00000380494 ARHGAP27Q6ZUM4 889 aa18.04■□□□□ 0.48
COL4A3BP-203ENST00000380494 PASD1Q8IV76 773 aa18.04■□□□□ 0.48
COL4A3BP-203ENST00000380494 PIGOQ8TEQ8 1089 aa18.04■□□□□ 0.48
COL4A3BP-203ENST00000380494 NEU2Q9Y3R4 380 aa18.04■□□□□ 0.48
COL4A3BP-203ENST00000380494 ADCY3O60266 1144 aa18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 SEC24DO94855 1032 aaPredicted RBP18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 WLSQ5T9L3 541 aa18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 CCDC24Q8N4L8 307 aa18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 MAML3Q96JK9 1138 aa18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 APOL6Q9BWW8 343 aa18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 PDE5AO76074 875 aa18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 SDC4P31431 198 aa18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 IMPG1Q17R60 797 aa18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 ZNF699Q32M78 642 aa18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 FAM47CQ5HY64 1035 aa18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 AP4S1Q9Y587 144 aa18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 APOL1O14791 398 aa18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 ATP6V1G2O95670 118 aa18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 TMEM253P0C7T8 217 aa18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 BCAR1P56945 870 aa18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 ZBTB10Q96DT7 871 aa18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 CARD9Q9H257 536 aa18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 AKAP10O43572 662 aa18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 TMCC1O94876 653 aa18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 BTNL9Q6UXG8 535 aa18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 LRRC34Q8IZ02 419 aa18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 TRIM9Q9C026 710 aa18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 OLFML3Q9NRN5 406 aa18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 CSADQ9Y600 493 aa18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 ZNF200P98182 395 aaPredicted RBP18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 HABP4Q5JVS0 413 aaKnown RBP18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 TTC39BQ5VTQ0 682 aaPredicted RBP18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 BEGAINQ9BUH8 593 aa18.03■□□□□ 0.48
COL4A3BP-203ENST00000380494 POTEB3A0JP26 581 aa18.02■□□□□ 0.48
COL4A3BP-203ENST00000380494 POTECB2RU33 542 aa18.02■□□□□ 0.48
COL4A3BP-203ENST00000380494 POTEBQ6S5H4 581 aa18.02■□□□□ 0.48
COL4A3BP-203ENST00000380494 SNX19Q92543 992 aa18.02■□□□□ 0.48
COL4A3BP-203ENST00000380494 USP11P51784 963 aa18.02■□□□□ 0.48
COL4A3BP-203ENST00000380494 GALCP54803 685 aa18.02■□□□□ 0.48
COL4A3BP-203ENST00000380494 KRR1Q13601 381 aaKnown RBP18.02■□□□□ 0.48
COL4A3BP-203ENST00000380494 MDH1BQ5I0G3 518 aa18.02■□□□□ 0.48
COL4A3BP-203ENST00000380494 USPL1Q5W0Q7 1092 aa18.02■□□□□ 0.48
COL4A3BP-203ENST00000380494 KRT27Q7Z3Y8 459 aa18.02■□□□□ 0.48
COL4A3BP-203ENST00000380494 NCAPG2Q86XI2 1143 aa18.02■□□□□ 0.48
COL4A3BP-203ENST00000380494 ANKMY2Q8IV38 441 aa18.02■□□□□ 0.48
COL4A3BP-203ENST00000380494 DDX17Q92841 729 aaKnown RBP18.02■□□□□ 0.48
COL4A3BP-203ENST00000380494 CAVIN3Q969G5 261 aa18.02■□□□□ 0.48
COL4A3BP-203ENST00000380494 PHF20Q9BVI0 1012 aa18.02■□□□□ 0.48
COL4A3BP-203ENST00000380494 AGPAT5Q9NUQ2 364 aa18.02■□□□□ 0.48
COL4A3BP-203ENST00000380494 PI4KBQ9UBF8 816 aa18.02■□□□□ 0.48
COL4A3BP-203ENST00000380494 APEX2Q9UBZ4 518 aa18.02■□□□□ 0.48
COL4A3BP-203ENST00000380494 BARGINQ6ZT62 677 aa18.02■□□□□ 0.48
COL4A3BP-203ENST00000380494 RSPH10B2B2RC85 870 aa18.02■□□□□ 0.47
COL4A3BP-203ENST00000380494 RSPH10BP0C881 870 aa18.02■□□□□ 0.47
COL4A3BP-203ENST00000380494 LRRC36Q1X8D7 754 aa18.02■□□□□ 0.47
COL4A3BP-203ENST00000380494 SPICE1Q8N0Z3 855 aa18.02■□□□□ 0.47
COL4A3BP-203ENST00000380494 TMEM47Q9BQJ4 181 aa18.02■□□□□ 0.47
COL4A3BP-203ENST00000380494 TBC1D22BQ9NU19 505 aa18.02■□□□□ 0.47
COL4A3BP-203ENST00000380494 CCDC15Q0P6D6 951 aa18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 PAGR1Q9BTK6 254 aa18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 DCLRE1BQ9H816 532 aa18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 SEC31BQ9NQW1 1179 aa18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 PMS1P54277 932 aaKnown RBP18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 NSUN2Q08J23 767 aaKnown RBP eCLIP18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 ZNF746Q6NUN9 644 aaPredicted RBP18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 LVRNQ6Q4G3 990 aa18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 ANGPTL8Q6UXH0 198 aa18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 PRPF39Q86UA1 669 aaKnown RBP18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 KIAA0825Q8IV33 1275 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms