RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 IRAK3Q9Y616 596 aa18.7■□□□□ 0.58
RER1-202ENST00000378512 NPHP3-ACAD11A0A0J9YXS1 232 aa18.69■□□□□ 0.58
RER1-202ENST00000378512 LOC730098B7Z3J9 87 aa18.69■□□□□ 0.58
RER1-202ENST00000378512 BRD1O95696 1058 aa18.69■□□□□ 0.58
RER1-202ENST00000378512 MAPTP10636 758 aaKnown RBP18.69■□□□□ 0.58
RER1-202ENST00000378512 SCNN1GP51170 649 aa18.69■□□□□ 0.58
RER1-202ENST00000378512 GIT2Q14161 759 aa18.69■□□□□ 0.58
RER1-202ENST00000378512 HERC4Q5GLZ8 1057 aaPredicted RBP18.69■□□□□ 0.58
RER1-202ENST00000378512 GPBP1Q86WP2 473 aa18.69■□□□□ 0.58
RER1-202ENST00000378512 FEZF2Q8TBJ5 459 aa18.69■□□□□ 0.58
RER1-202ENST00000378512 SUSD6Q92537 303 aa18.69■□□□□ 0.58
RER1-202ENST00000378512 TMEM169Q96HH4 297 aa18.69■□□□□ 0.58
RER1-202ENST00000378512 RPGRIP1Q96KN7 1286 aa18.69■□□□□ 0.58
RER1-202ENST00000378512 ZNF396Q96N95 335 aaPredicted RBP18.69■□□□□ 0.58
RER1-202ENST00000378512 FIZ1Q96SL8 496 aa18.69■□□□□ 0.58
RER1-202ENST00000378512 CDCA3Q99618 268 aaPredicted RBP18.69■□□□□ 0.58
RER1-202ENST00000378512 VN1R3Q9BXE9 311 aa18.69■□□□□ 0.58
RER1-202ENST00000378512 LARSQ9P2J5 1176 aaKnown RBP18.69■□□□□ 0.58
RER1-202ENST00000378512 FSD2A1L4K1 749 aa18.68■□□□□ 0.58
RER1-202ENST00000378512 C2orf71A6NGG8 1288 aa18.68■□□□□ 0.58
RER1-202ENST00000378512 SPTLC2O15270 562 aa18.68■□□□□ 0.58
RER1-202ENST00000378512 SLC16A4O15374 487 aa18.68■□□□□ 0.58
RER1-202ENST00000378512 ALDH2P05091 517 aa18.68■□□□□ 0.58
RER1-202ENST00000378512 SCP2P22307 547 aa18.68■□□□□ 0.58
RER1-202ENST00000378512 SP100P23497 879 aaPredicted RBP18.68■□□□□ 0.58
RER1-202ENST00000378512 SMTNP53814 917 aa18.68■□□□□ 0.58
RER1-202ENST00000378512 ATL3Q6DD88 541 aa18.68■□□□□ 0.58
RER1-202ENST00000378512 ANKRD54Q6NXT1 300 aa18.68■□□□□ 0.58
RER1-202ENST00000378512 HFE2Q6ZVN8 426 aa18.68■□□□□ 0.58
RER1-202ENST00000378512 RNF168Q8IYW5 571 aaPredicted RBP18.68■□□□□ 0.58
RER1-202ENST00000378512 MRPL4Q9BYD3 311 aaKnown RBP18.68■□□□□ 0.58
RER1-202ENST00000378512 GBP3Q9H0R5 595 aa18.68■□□□□ 0.58
RER1-202ENST00000378512 ZBP1Q9H171 429 aa18.68■□□□□ 0.58
RER1-202ENST00000378512 MARCH5Q9NX47 278 aa18.68■□□□□ 0.58
RER1-202ENST00000378512 STK39Q9UEW8 545 aa18.68■□□□□ 0.58
RER1-202ENST00000378512 CCDC39Q9UFE4 941 aa18.68■□□□□ 0.58
RER1-202ENST00000378512 TCHHQ07283 1943 aa18.67■□□□□ 0.58
RER1-202ENST00000378512 PTGESO14684 152 aa18.67■□□□□ 0.58
RER1-202ENST00000378512 NRP1O14786 923 aa18.67■□□□□ 0.58
RER1-202ENST00000378512 CA8P35219 290 aa18.67■□□□□ 0.58
RER1-202ENST00000378512 GRIK3Q13003 919 aa18.67■□□□□ 0.58
RER1-202ENST00000378512 STK38Q15208 465 aa18.67■□□□□ 0.58
RER1-202ENST00000378512 NAB2Q15742 525 aa18.67■□□□□ 0.58
RER1-202ENST00000378512 KANK3Q6NY19 840 aa18.67■□□□□ 0.58
RER1-202ENST00000378512 TMEM184AQ6ZMB5 413 aa18.67■□□□□ 0.58
RER1-202ENST00000378512 MRPL43Q8N983 215 aaKnown RBP18.67■□□□□ 0.58
RER1-202ENST00000378512 APOL6Q9BWW8 343 aa18.67■□□□□ 0.58
RER1-202ENST00000378512 PHF7Q9BWX1 381 aaPredicted RBP18.67■□□□□ 0.58
RER1-202ENST00000378512 SNTG2Q9NY99 539 aa18.67■□□□□ 0.58
RER1-202ENST00000378512 TFIP11Q9UBB9 837 aaKnown RBP18.67■□□□□ 0.58
RER1-202ENST00000378512 WDFY4Q6ZS81 3184 aa18.67■□□□□ 0.58
RER1-202ENST00000378512 A0A087X0B3 334 aa18.66■□□□□ 0.58
RER1-202ENST00000378512 H0YCG3 227 aa18.66■□□□□ 0.58
RER1-202ENST00000378512 CLASP2O75122 1294 aaKnown RBP18.66■□□□□ 0.58
RER1-202ENST00000378512 RECQL4O94761 1208 aa18.66■□□□□ 0.58
RER1-202ENST00000378512 CTSAP10619 480 aa18.66■□□□□ 0.58
RER1-202ENST00000378512 LIG1P18858 919 aa18.66■□□□□ 0.58
RER1-202ENST00000378512 CACNB1Q02641 598 aaPredicted RBP18.66■□□□□ 0.58
RER1-202ENST00000378512 SMC1AQ14683 1233 aaKnown RBP18.66■□□□□ 0.58
RER1-202ENST00000378512 XKR4Q5GH76 650 aa18.66■□□□□ 0.58
RER1-202ENST00000378512 FAM193BQ96PV7 902 aaPredicted RBP18.66■□□□□ 0.58
RER1-202ENST00000378512 TARS2Q9BW92 718 aaKnown RBP18.66■□□□□ 0.58
RER1-202ENST00000378512 CDT1Q9H211 546 aa18.66■□□□□ 0.58
RER1-202ENST00000378512 CXCL16Q9H2A7 254 aa18.66■□□□□ 0.58
RER1-202ENST00000378512 PARVGQ9HBI0 331 aa18.66■□□□□ 0.58
RER1-202ENST00000378512 FAN1Q9Y2M0 1017 aa18.66■□□□□ 0.58
RER1-202ENST00000378512 HCFC2Q9Y5Z7 792 aa18.66■□□□□ 0.58
RER1-202ENST00000378512 TXLNAP40222 546 aa18.66■□□□□ 0.58
RER1-202ENST00000378512 GRM5P41594 1212 aa18.66■□□□□ 0.58
RER1-202ENST00000378512 CBX2Q14781 532 aaPredicted RBP18.66■□□□□ 0.58
RER1-202ENST00000378512 AXDND1Q5T1B0 1012 aaPredicted RBP18.66■□□□□ 0.58
RER1-202ENST00000378512 RRAGBQ5VZM2 374 aa18.66■□□□□ 0.58
RER1-202ENST00000378512 ALKAL1Q6UXT8 129 aa18.66■□□□□ 0.58
RER1-202ENST00000378512 ZPBP2Q6X784 338 aa18.66■□□□□ 0.58
RER1-202ENST00000378512 HAUS6Q7Z4H7 955 aa18.66■□□□□ 0.58
RER1-202ENST00000378512 VPS52Q8N1B4 723 aa18.66■□□□□ 0.58
RER1-202ENST00000378512 RASSF8Q8NHQ8 419 aa18.66■□□□□ 0.58
RER1-202ENST00000378512 ST6GALNAC4Q9H4F1 302 aa18.66■□□□□ 0.58
RER1-202ENST00000378512 KLK14Q9P0G3 267 aa18.66■□□□□ 0.58
RER1-202ENST00000378512 PARP2Q9UGN5 583 aa18.66■□□□□ 0.58
RER1-202ENST00000378512 ZDHHC9Q9Y397 364 aa18.66■□□□□ 0.58
RER1-202ENST00000378512 TECTAO75443 2155 aa18.65■□□□□ 0.58
RER1-202ENST00000378512 LILRB3O75022 631 aa18.65■□□□□ 0.58
RER1-202ENST00000378512 TOM1L1O75674 476 aa18.65■□□□□ 0.58
RER1-202ENST00000378512 CXCL14O95715 111 aa18.65■□□□□ 0.58
RER1-202ENST00000378512 PIGRP01833 764 aa18.65■□□□□ 0.58
RER1-202ENST00000378512 WEE2P0C1S8 567 aa18.65■□□□□ 0.58
RER1-202ENST00000378512 MCF2P10911 925 aa18.65■□□□□ 0.58
RER1-202ENST00000378512 DHX8Q14562 1220 aaKnown RBP18.65■□□□□ 0.58
RER1-202ENST00000378512 E2F4Q16254 413 aa18.65■□□□□ 0.58
RER1-202ENST00000378512 MPZL3Q6UWV2 235 aa18.65■□□□□ 0.58
RER1-202ENST00000378512 CCDC73Q6ZRK6 1079 aa18.65■□□□□ 0.58
RER1-202ENST00000378512 APBB1IPQ7Z5R6 666 aaPredicted RBP18.65■□□□□ 0.58
RER1-202ENST00000378512 C12orf76Q8N812 135 aaPredicted RBP18.65■□□□□ 0.58
RER1-202ENST00000378512 SPRYD3Q8NCJ5 442 aa18.65■□□□□ 0.58
RER1-202ENST00000378512 EDAQ92838 391 aa18.65■□□□□ 0.58
RER1-202ENST00000378512 DNAJC19Q96DA6 116 aa18.65■□□□□ 0.58
RER1-202ENST00000378512 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.64■□□□□ 0.57
RER1-202ENST00000378512 TRAK2O60296 914 aa18.64■□□□□ 0.57
RER1-202ENST00000378512 CUTAO60888 179 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms