RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 FILIP1LQ4L180 1135 aa17.17■□□□□ 0.34
CCDC107-204ENST00000378409 DCAF17Q5H9S7 520 aaPredicted RBP17.17■□□□□ 0.34
CCDC107-204ENST00000378409 CRELD2Q6UXH1 353 aaPredicted RBP17.17■□□□□ 0.34
CCDC107-204ENST00000378409 INTS8Q75QN2 995 aaKnown RBP17.17■□□□□ 0.34
CCDC107-204ENST00000378409 BORCS6Q96GS4 357 aa17.17■□□□□ 0.34
CCDC107-204ENST00000378409 SCLYQ96I15 445 aa17.17■□□□□ 0.34
CCDC107-204ENST00000378409 EIF2AQ9BY44 585 aaKnown RBP17.17■□□□□ 0.34
CCDC107-204ENST00000378409 IFIH1Q9BYX4 1025 aaKnown RBP17.17■□□□□ 0.34
CCDC107-204ENST00000378409 CHST12Q9NRB3 414 aa17.17■□□□□ 0.34
CCDC107-204ENST00000378409 RBAKQ9NYW8 714 aaPredicted RBP17.17■□□□□ 0.34
CCDC107-204ENST00000378409 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.17■□□□□ 0.34
CCDC107-204ENST00000378409 MICAL3Q7RTP6 2002 aa17.16■□□□□ 0.34
CCDC107-204ENST00000378409 CBFA2T2O43439 604 aa17.16■□□□□ 0.34
CCDC107-204ENST00000378409 STAG3L1P0CL83 205 aa17.16■□□□□ 0.34
CCDC107-204ENST00000378409 ZSCAN20P17040 1043 aaPredicted RBP17.16■□□□□ 0.34
CCDC107-204ENST00000378409 BFSP1Q12934 665 aa17.16■□□□□ 0.34
CCDC107-204ENST00000378409 KYAT1Q16773 422 aa17.16■□□□□ 0.34
CCDC107-204ENST00000378409 UBXN11Q5T124 520 aa17.16■□□□□ 0.34
CCDC107-204ENST00000378409 CCDC127Q96BQ5 260 aa17.16■□□□□ 0.34
CCDC107-204ENST00000378409 MFSD14AQ96MC6 490 aa17.16■□□□□ 0.34
CCDC107-204ENST00000378409 NAP1L5Q96NT1 182 aaPredicted RBP17.16■□□□□ 0.34
CCDC107-204ENST00000378409 XPO4Q9C0E2 1151 aaKnown RBP17.16■□□□□ 0.34
CCDC107-204ENST00000378409 WNT8AQ9H1J5 351 aa17.16■□□□□ 0.34
CCDC107-204ENST00000378409 TMX1Q9H3N1 280 aa17.16■□□□□ 0.34
CCDC107-204ENST00000378409 CPSF3Q9UKF6 684 aaKnown RBP17.16■□□□□ 0.34
CCDC107-204ENST00000378409 LRRC10BA6NIK2 292 aa17.15■□□□□ 0.34
CCDC107-204ENST00000378409 NBNO60934 754 aa17.15■□□□□ 0.34
CCDC107-204ENST00000378409 CLTAP09496 248 aa17.15■□□□□ 0.34
CCDC107-204ENST00000378409 TRIM49P0CI25 452 aa17.15■□□□□ 0.34
CCDC107-204ENST00000378409 TRIM49CP0CI26 452 aa17.15■□□□□ 0.34
CCDC107-204ENST00000378409 VAMP7P51809 220 aa17.15■□□□□ 0.34
CCDC107-204ENST00000378409 ZNF75DP51815 510 aa17.15■□□□□ 0.34
CCDC107-204ENST00000378409 PPP2R3AQ06190 1150 aa17.15■□□□□ 0.34
CCDC107-204ENST00000378409 VWA3BQ502W6 1294 aa17.15■□□□□ 0.34
CCDC107-204ENST00000378409 MIIPQ5JXC2 388 aa17.15■□□□□ 0.34
CCDC107-204ENST00000378409 BRSK2Q8IWQ3 736 aa17.15■□□□□ 0.34
CCDC107-204ENST00000378409 TMEM192Q8IY95 271 aa17.15■□□□□ 0.34
CCDC107-204ENST00000378409 FAM212AQ96EL1 285 aa17.15■□□□□ 0.34
CCDC107-204ENST00000378409 RPF1Q9H9Y2 349 aaKnown RBP17.15■□□□□ 0.34
CCDC107-204ENST00000378409 A0A1B0GTH6 734 aa17.14■□□□□ 0.33
CCDC107-204ENST00000378409 TRIM43BA6NCK2 446 aa17.14■□□□□ 0.33
CCDC107-204ENST00000378409 LGALS16A8MUM7 142 aa17.14■□□□□ 0.33
CCDC107-204ENST00000378409 MGEA5O60502 916 aa17.14■□□□□ 0.33
CCDC107-204ENST00000378409 PARNO95453 639 aaKnown RBP17.14■□□□□ 0.33
CCDC107-204ENST00000378409 ADCY5O95622 1261 aa17.14■□□□□ 0.33
CCDC107-204ENST00000378409 TPM3P06753 285 aa17.14■□□□□ 0.33
CCDC107-204ENST00000378409 CXCL8P10145 99 aa17.14■□□□□ 0.33
CCDC107-204ENST00000378409 GRM5P41594 1212 aa17.14■□□□□ 0.33
CCDC107-204ENST00000378409 DLG4P78352 724 aa17.14■□□□□ 0.33
CCDC107-204ENST00000378409 DSC3Q14574 896 aa17.14■□□□□ 0.33
CCDC107-204ENST00000378409 GPNMBQ14956 572 aa17.14■□□□□ 0.33
CCDC107-204ENST00000378409 PSMD6Q15008 389 aa17.14■□□□□ 0.33
CCDC107-204ENST00000378409 ENOX2Q16206 610 aaKnown RBP17.14■□□□□ 0.33
CCDC107-204ENST00000378409 USP37Q86T82 979 aa17.14■□□□□ 0.33
CCDC107-204ENST00000378409 PLEKHO2Q8TD55 490 aa17.14■□□□□ 0.33
CCDC107-204ENST00000378409 TMC2Q8TDI7 906 aa17.14■□□□□ 0.33
CCDC107-204ENST00000378409 PARD3BQ8TEW8 1205 aa17.14■□□□□ 0.33
CCDC107-204ENST00000378409 ANP32BQ92688 251 aaKnown RBP17.14■□□□□ 0.33
CCDC107-204ENST00000378409 SLC35C1Q96A29 364 aa17.14■□□□□ 0.33
CCDC107-204ENST00000378409 TRIM43Q96BQ3 446 aaPredicted RBP17.14■□□□□ 0.33
CCDC107-204ENST00000378409 ACAP3Q96P50 834 aa17.14■□□□□ 0.33
CCDC107-204ENST00000378409 FNBP1Q96RU3 617 aa17.14■□□□□ 0.33
CCDC107-204ENST00000378409 ADAM2Q99965 735 aa17.14■□□□□ 0.33
CCDC107-204ENST00000378409 CCDC94Q9BW85 323 aaPredicted RBP17.14■□□□□ 0.33
CCDC107-204ENST00000378409 APOL6Q9BWW8 343 aa17.14■□□□□ 0.33
CCDC107-204ENST00000378409 NDST4Q9H3R1 872 aa17.14■□□□□ 0.33
CCDC107-204ENST00000378409 NXF3Q9H4D5 531 aaKnown RBP17.14■□□□□ 0.33
CCDC107-204ENST00000378409 MMRN2Q9H8L6 949 aa17.14■□□□□ 0.33
CCDC107-204ENST00000378409 RTN4Q9NQC3 1192 aaKnown RBP17.14■□□□□ 0.33
CCDC107-204ENST00000378409 SNTG2Q9NY99 539 aa17.14■□□□□ 0.33
CCDC107-204ENST00000378409 HES2Q9Y543 173 aa17.14■□□□□ 0.33
CCDC107-204ENST00000378409 PCDHB2Q9Y5E7 798 aa17.14■□□□□ 0.33
CCDC107-204ENST00000378409 TDRD15B5MCY1 1934 aaKnown RBP17.13■□□□□ 0.33
CCDC107-204ENST00000378409 KIAA0355O15063 1070 aa17.13■□□□□ 0.33
CCDC107-204ENST00000378409 TIMP1P01033 207 aa17.13■□□□□ 0.33
CCDC107-204ENST00000378409 AFPP02771 609 aaKnown RBP17.13■□□□□ 0.33
CCDC107-204ENST00000378409 DLATP10515 647 aaKnown RBP17.13■□□□□ 0.33
CCDC107-204ENST00000378409 RAG1P15918 1043 aa17.13■□□□□ 0.33
CCDC107-204ENST00000378409 IBSPP21815 317 aaPredicted RBP17.13■□□□□ 0.33
CCDC107-204ENST00000378409 KCNH2Q12809 1159 aa17.13■□□□□ 0.33
CCDC107-204ENST00000378409 NR1I3Q14994 352 aa17.13■□□□□ 0.33
CCDC107-204ENST00000378409 PLEKHG4Q58EX7 1191 aa17.13■□□□□ 0.33
CCDC107-204ENST00000378409 DEFB128Q7Z7B8 93 aa17.13■□□□□ 0.33
CCDC107-204ENST00000378409 SEPT8Q92599 483 aa17.13■□□□□ 0.33
CCDC107-204ENST00000378409 PDE11AQ9HCR9 933 aa17.13■□□□□ 0.33
CCDC107-204ENST00000378409 FAM105AQ9NUU6 356 aa17.13■□□□□ 0.33
CCDC107-204ENST00000378409 INTS13Q9NVM9 706 aa17.13■□□□□ 0.33
CCDC107-204ENST00000378409 IPPQ9Y573 584 aa17.13■□□□□ 0.33
CCDC107-204ENST00000378409 LTBP2Q14767 1821 aa17.12■□□□□ 0.33
CCDC107-204ENST00000378409 LRRIQ3A6PVS8 624 aaPredicted RBP17.12■□□□□ 0.33
CCDC107-204ENST00000378409 TEX33O43247 280 aa17.12■□□□□ 0.33
CCDC107-204ENST00000378409 IL18RAPO95256 599 aa17.12■□□□□ 0.33
CCDC107-204ENST00000378409 RAB27AP51159 221 aa17.12■□□□□ 0.33
CCDC107-204ENST00000378409 YARSP54577 528 aaKnown RBP17.12■□□□□ 0.33
CCDC107-204ENST00000378409 WNT7BP56706 349 aa17.12■□□□□ 0.33
CCDC107-204ENST00000378409 UBXN1Q04323 297 aa17.12■□□□□ 0.33
CCDC107-204ENST00000378409 SURF1Q15526 300 aa17.12■□□□□ 0.33
CCDC107-204ENST00000378409 C1orf220Q5T0J3 134 aa17.12■□□□□ 0.33
CCDC107-204ENST00000378409 FKBP15Q5T1M5 1219 aa17.12■□□□□ 0.33
CCDC107-204ENST00000378409 SMG8Q8ND04 991 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms