RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 VIL1P09327 827 aaKnown RBP17.8■□□□□ 0.44
PCDHA1-201ENST00000378133 VCAM1P19320 739 aa17.8■□□□□ 0.44
PCDHA1-201ENST00000378133 PPP3CAQ08209 521 aa17.8■□□□□ 0.44
PCDHA1-201ENST00000378133 LRRC14Q15048 493 aa17.8■□□□□ 0.44
PCDHA1-201ENST00000378133 ZYXQ15942 572 aaKnown RBP17.8■□□□□ 0.44
PCDHA1-201ENST00000378133 GALNTL6Q49A17 601 aa17.8■□□□□ 0.44
PCDHA1-201ENST00000378133 CAPRIN2Q6IMN6 1127 aaKnown RBP17.8■□□□□ 0.44
PCDHA1-201ENST00000378133 C18orf8Q96DM3 657 aa17.8■□□□□ 0.44
PCDHA1-201ENST00000378133 WDR11Q9BZH6 1224 aa17.8■□□□□ 0.44
PCDHA1-201ENST00000378133 MTRF1LQ9UGC7 380 aaKnown RBP17.8■□□□□ 0.44
PCDHA1-201ENST00000378133 IPO5O00410 1097 aaKnown RBP17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 SUN1O94901 812 aa17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 KRT16P08779 473 aa17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 FGFR4P22455 802 aa17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 GCLMP48507 274 aa17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 MARCKSL1P49006 195 aa17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 FKBP1AP62942 108 aaKnown RBP17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 SLC9A9Q8IVB4 645 aa17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 GBP7Q8N8V2 638 aaPredicted RBP17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 MGARPQ8TDB4 240 aa17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 STRA6Q9BX79 667 aa17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 TEKT3Q9BXF9 490 aa17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 ARHGEF10LQ9HCE6 1279 aa17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 FGFR1OP2Q9NVK5 253 aa17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 SLC5A4Q9NY91 659 aa17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 GRHL1Q9NZI5 618 aa17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 KCND2Q9NZV8 630 aa17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 A8MUI8 341 aa17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 TCP11X1B4DZS4 312 aa17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 ENTPD3O75355 529 aa17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 BAG6P46379 1132 aa17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 BNIP1Q12981 228 aa17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 AUHQ13825 339 aaKnown RBP17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 PADI6Q6TGC4 694 aa17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 RHOT2Q8IXI1 618 aa17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 RPUSD2Q8IZ73 545 aaKnown RBP17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 ZNF483Q8TF39 744 aaPredicted RBP17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 TMEM109Q9BVC6 243 aa17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 KIF9Q9HAQ2 790 aa17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 HOMER3Q9NSC5 361 aa17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.79■□□□□ 0.44
PCDHA1-201ENST00000378133 TCP10L2B9ZVM9 353 aa17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 OAS1P00973 400 aaKnown RBP17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 PEX19P40855 299 aa17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 ERICH1Q86X53 443 aa17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 ZSWIM2Q8NEG5 633 aa17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 KAT5Q92993 513 aa17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 IFT74Q96LB3 600 aa17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 SH2D3AQ9BRG2 576 aa17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 CBWD1Q9BRT8 395 aa17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 TMX2Q9Y320 296 aa17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 ZBTB12Q9Y330 459 aaPredicted RBP17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 ATRNL1Q5VV63 1379 aa17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 MUTP22033 750 aa17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 RPL21P46778 160 aaKnown RBP17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 VAMP7P51809 220 aa17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 TRAF1Q13077 416 aa17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 MESDQ14696 234 aa17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 AOC3Q16853 763 aa17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 EXOC3L1Q86VI1 746 aa17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 ZNF526Q8TF50 670 aaPredicted RBP17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 SAAL1Q96ER3 474 aa17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 RIPK2O43353 540 aa17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 SMNDC1O75940 238 aaKnown RBP eCLIP17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 MSH2P43246 934 aa17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 CC2D2BQ6DHV5 1058 aa17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 B3GNT9Q6UX72 402 aa17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 TRMT1LQ7Z2T5 733 aaKnown RBP17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 ZDHHC14Q8IZN3 488 aa17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 ACP6Q9NPH0 428 aa17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 ARHGEF3Q9NR81 526 aa17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 PARP2Q9UGN5 583 aa17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 MRPL11Q9Y3B7 192 aaKnown RBP17.78■□□□□ 0.44
PCDHA1-201ENST00000378133 PTGIRP43119 386 aa17.77■□□□□ 0.44
PCDHA1-201ENST00000378133 GPC5P78333 572 aa17.77■□□□□ 0.44
PCDHA1-201ENST00000378133 CLUL1Q15846 466 aa17.77■□□□□ 0.44
PCDHA1-201ENST00000378133 TNFAIP8L3Q5GJ75 292 aa17.77■□□□□ 0.44
PCDHA1-201ENST00000378133 NUGGCQ68CJ6 796 aa17.77■□□□□ 0.44
PCDHA1-201ENST00000378133 CDCA2Q69YH5 1023 aaPredicted RBP17.77■□□□□ 0.44
PCDHA1-201ENST00000378133 MIS18BP1Q6P0N0 1132 aa17.77■□□□□ 0.44
PCDHA1-201ENST00000378133 INTS8Q75QN2 995 aaKnown RBP17.77■□□□□ 0.44
PCDHA1-201ENST00000378133 PRELID2Q8N945 189 aa17.77■□□□□ 0.44
PCDHA1-201ENST00000378133 PODXLO00592 558 aa17.77■□□□□ 0.43
PCDHA1-201ENST00000378133 PHF2O75151 1096 aa17.77■□□□□ 0.43
PCDHA1-201ENST00000378133 COMTP21964 271 aa17.77■□□□□ 0.43
PCDHA1-201ENST00000378133 ATP11AP98196 1134 aa17.77■□□□□ 0.43
PCDHA1-201ENST00000378133 CETN1Q12798 172 aa17.77■□□□□ 0.43
PCDHA1-201ENST00000378133 UBL4BQ8N7F7 174 aa17.77■□□□□ 0.43
PCDHA1-201ENST00000378133 PCDHB18PQ96TA0 734 aa17.77■□□□□ 0.43
PCDHA1-201ENST00000378133 PLCD4Q9BRC7 762 aa17.77■□□□□ 0.43
PCDHA1-201ENST00000378133 RANBP17Q9H2T7 1088 aaKnown RBP17.77■□□□□ 0.43
PCDHA1-201ENST00000378133 EHMT1Q9H9B1 1298 aa17.77■□□□□ 0.43
PCDHA1-201ENST00000378133 SPATS2LQ9NUQ6 558 aaKnown RBP17.77■□□□□ 0.43
PCDHA1-201ENST00000378133 FBXO28Q9NVF7 368 aa17.77■□□□□ 0.43
PCDHA1-201ENST00000378133 LARSQ9P2J5 1176 aaKnown RBP17.77■□□□□ 0.43
PCDHA1-201ENST00000378133 PNMA3Q9UL41 463 aa17.77■□□□□ 0.43
PCDHA1-201ENST00000378133 ATMINO43313 823 aaPredicted RBP17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 SGPL1O95470 568 aa17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 ATP2A2P16615 1042 aaKnown RBP17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 ITGB5P18084 799 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms