RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 GSDMAQ96QA5 445 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 RPS6KC1Q96S38 1066 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 C17orf80Q9BSJ5 609 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 SLC39A2Q9NP94 309 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 INPP5FQ9Y2H2 1132 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 PCDHB12Q9Y5F1 795 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 ANKRD63C9JTQ0 380 aa14.46□□□□□ -0.09
CKAP2-202ENST00000378034 KIAA0391O15091 583 aaKnown RBP14.46□□□□□ -0.09
CKAP2-202ENST00000378034 CLTAP09496 248 aa14.46□□□□□ -0.09
CKAP2-202ENST00000378034 GARTP22102 1010 aa14.46□□□□□ -0.09
CKAP2-202ENST00000378034 POU5F1Q01860 360 aaKnown RBP14.46□□□□□ -0.09
CKAP2-202ENST00000378034 STK4Q13043 487 aa14.46□□□□□ -0.09
CKAP2-202ENST00000378034 PNOCQ13519 176 aa14.46□□□□□ -0.09
CKAP2-202ENST00000378034 THNSL1Q8IYQ7 743 aa14.46□□□□□ -0.09
CKAP2-202ENST00000378034 FBXO22Q8NEZ5 403 aa14.46□□□□□ -0.09
CKAP2-202ENST00000378034 SPATA20Q8TB22 786 aa14.46□□□□□ -0.09
CKAP2-202ENST00000378034 SCFD1Q8WVM8 642 aa14.46□□□□□ -0.09
CKAP2-202ENST00000378034 ARNTL2Q8WYA1 636 aa14.46□□□□□ -0.09
CKAP2-202ENST00000378034 C11orf84Q9BUA3 381 aaPredicted RBP14.46□□□□□ -0.09
CKAP2-202ENST00000378034 MSTO1Q9BUK6 570 aa14.46□□□□□ -0.09
CKAP2-202ENST00000378034 HAPLN2Q9GZV7 340 aa14.46□□□□□ -0.09
CKAP2-202ENST00000378034 GBP3Q9H0R5 595 aa14.46□□□□□ -0.09
CKAP2-202ENST00000378034 LMBRD1Q9NUN5 540 aa14.46□□□□□ -0.09
CKAP2-202ENST00000378034 CGNQ9P2M7 1197 aaKnown RBP14.46□□□□□ -0.09
CKAP2-202ENST00000378034 GDAQ9Y2T3 454 aa14.46□□□□□ -0.09
CKAP2-202ENST00000378034 HARSP12081 509 aaKnown RBP14.45□□□□□ -0.1
CKAP2-202ENST00000378034 CTNNB1P35222 781 aa14.45□□□□□ -0.1
CKAP2-202ENST00000378034 GRIK3Q13003 919 aa14.45□□□□□ -0.1
CKAP2-202ENST00000378034 GRIN2CQ14957 1233 aa14.45□□□□□ -0.1
CKAP2-202ENST00000378034 XKR4Q5GH76 650 aa14.45□□□□□ -0.1
CKAP2-202ENST00000378034 COLGALT1Q8NBJ5 622 aa14.45□□□□□ -0.1
CKAP2-202ENST00000378034 GLIS3Q8NEA6 775 aa14.45□□□□□ -0.1
CKAP2-202ENST00000378034 GSTCDQ8NEC7 633 aa14.45□□□□□ -0.1
CKAP2-202ENST00000378034 FAM193BQ96PV7 902 aaPredicted RBP14.45□□□□□ -0.1
CKAP2-202ENST00000378034 TMEM175Q9BSA9 504 aa14.45□□□□□ -0.1
CKAP2-202ENST00000378034 PLEKHA5Q9HAU0 1116 aa14.45□□□□□ -0.1
CKAP2-202ENST00000378034 AGO2Q9UKV8 859 aaKnown RBP14.45□□□□□ -0.1
CKAP2-202ENST00000378034 TDRD15B5MCY1 1934 aaKnown RBP14.45□□□□□ -0.1
CKAP2-202ENST00000378034 H3BNC9 293 aa14.45□□□□□ -0.1
CKAP2-202ENST00000378034 FAM189A1O60320 539 aa14.45□□□□□ -0.1
CKAP2-202ENST00000378034 LDHAP00338 332 aaKnown RBP14.45□□□□□ -0.1
CKAP2-202ENST00000378034 HOXD13P35453 343 aa14.45□□□□□ -0.1
CKAP2-202ENST00000378034 PPM1AP35813 382 aa14.45□□□□□ -0.1
CKAP2-202ENST00000378034 SCNN1GP51170 649 aa14.45□□□□□ -0.1
CKAP2-202ENST00000378034 ALKAL1Q6UXT8 129 aa14.45□□□□□ -0.1
CKAP2-202ENST00000378034 Q7L0L9 218 aa14.45□□□□□ -0.1
CKAP2-202ENST00000378034 CEP120Q8N960 986 aa14.45□□□□□ -0.1
CKAP2-202ENST00000378034 KIAA0895Q8NCT3 520 aa14.45□□□□□ -0.1
CKAP2-202ENST00000378034 POMGNT1Q8WZA1 660 aa14.45□□□□□ -0.1
CKAP2-202ENST00000378034 SMARCE1Q969G3 411 aa14.45□□□□□ -0.1
CKAP2-202ENST00000378034 ZFP42Q96MM3 310 aa14.45□□□□□ -0.1
CKAP2-202ENST00000378034 ZNF558Q96NG5 402 aa14.45□□□□□ -0.1
CKAP2-202ENST00000378034 TSPAN18Q96SJ8 248 aa14.45□□□□□ -0.1
CKAP2-202ENST00000378034 NRDE2Q9H7Z3 1164 aa14.45□□□□□ -0.1
CKAP2-202ENST00000378034 MTMR10Q9NXD2 777 aa14.45□□□□□ -0.1
CKAP2-202ENST00000378034 KLK14Q9P0G3 267 aa14.45□□□□□ -0.1
CKAP2-202ENST00000378034 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.45□□□□□ -0.1
CKAP2-202ENST00000378034 CITO14578 2027 aa14.44□□□□□ -0.1
CKAP2-202ENST00000378034 POMCP01189 267 aa14.44□□□□□ -0.1
CKAP2-202ENST00000378034 THP07101 528 aa14.44□□□□□ -0.1
CKAP2-202ENST00000378034 ADSSP30520 456 aa14.44□□□□□ -0.1
CKAP2-202ENST00000378034 ALDH7A1P49419 539 aaKnown RBP14.44□□□□□ -0.1
CKAP2-202ENST00000378034 AFF1P51825 1210 aaKnown RBP14.44□□□□□ -0.1
CKAP2-202ENST00000378034 OSTNP61366 133 aa14.44□□□□□ -0.1
CKAP2-202ENST00000378034 HSP90AA2PQ14568 343 aaPredicted RBP14.44□□□□□ -0.1
CKAP2-202ENST00000378034 KNOP1Q1ED39 458 aaKnown RBP14.44□□□□□ -0.1
CKAP2-202ENST00000378034 KCNT2Q6UVM3 1135 aa14.44□□□□□ -0.1
CKAP2-202ENST00000378034 HS2ST1Q7LGA3 356 aa14.44□□□□□ -0.1
CKAP2-202ENST00000378034 SPRED2Q7Z698 418 aa14.44□□□□□ -0.1
CKAP2-202ENST00000378034 CD302Q8IX05 232 aa14.44□□□□□ -0.1
CKAP2-202ENST00000378034 GOLGA5Q8TBA6 731 aa14.44□□□□□ -0.1
CKAP2-202ENST00000378034 SNX27Q96L92 541 aa14.44□□□□□ -0.1
CKAP2-202ENST00000378034 CERS4Q9HA82 394 aa14.44□□□□□ -0.1
CKAP2-202ENST00000378034 MIOSQ9NXC5 875 aa14.44□□□□□ -0.1
CKAP2-202ENST00000378034 MTUS1Q9ULD2 1270 aa14.44□□□□□ -0.1
CKAP2-202ENST00000378034 PCDHA5Q9Y5H7 936 aa14.44□□□□□ -0.1
CKAP2-202ENST00000378034 CHD9Q3L8U1 2897 aa14.44□□□□□ -0.1
CKAP2-202ENST00000378034 KCNE1P15382 129 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 DSC1Q08554 894 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 FAM161BQ96MY7 647 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 PRDM12Q9H4Q4 367 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 LMCD1Q9NZU5 365 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 CNTN3Q9P232 1028 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 CPSF3Q9UKF6 684 aaKnown RBP14.43□□□□□ -0.1
CKAP2-202ENST00000378034 TISP43B9A030 160 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 PTGESO14684 152 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 ZC3H11AO75152 810 aaKnown RBP eCLIP14.43□□□□□ -0.1
CKAP2-202ENST00000378034 DDHD2O94830 711 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 ALDH2P05091 517 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 ADRB2P07550 413 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 POU3F3P20264 500 aaPredicted RBP14.43□□□□□ -0.1
CKAP2-202ENST00000378034 BCAR1P56945 870 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 PLCB3Q01970 1234 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 UBE3AQ05086 875 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 GPM6BQ13491 265 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 SLC10A6Q3KNW5 377 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 COBLL1Q53SF7 1204 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 ARMCX5Q6P1M9 558 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 ZNF280BQ86YH2 543 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 NELFCDQ8IXH7 590 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms