RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 PCNX4Q63HM2 1172 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 UBXN6Q9BZV1 441 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 VAT1LQ9HCJ6 419 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 OXCT1P55809 520 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 GPRASP2Q96D09 838 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 EPSTI1Q96J88 318 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 C1orf21Q9H246 121 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 GPC4O75487 556 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 C7P10643 843 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 NLRP11P59045 1033 aaKnown RBP5.23□□□□□ -1.57
PCDH9-201ENST00000377861 ARMT1Q9H993 441 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 PLAAQ9Y263 795 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 IFRD1O00458 451 aaPredicted RBP5.23□□□□□ -1.57
PCDH9-201ENST00000377861 LMTK3Q96Q04 1460 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 PURBQ96QR8 312 aaKnown RBP5.23□□□□□ -1.57
PCDH9-201ENST00000377861 WDR24Q96S15 920 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 PRPSAP2O60256 369 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 MLNP12872 115 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 CAPRIN1Q14444 709 aaKnown RBP5.23□□□□□ -1.57
PCDH9-201ENST00000377861 PTCD2Q8WV60 388 aaKnown RBP5.23□□□□□ -1.57
PCDH9-201ENST00000377861 OSCP1Q8WVF1 389 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 VPS54Q9P1Q0 977 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 CYP2C18P33260 490 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 MSLNQ13421 630 aaPredicted RBP5.23□□□□□ -1.57
PCDH9-201ENST00000377861 RRP1BQ14684 758 aaKnown RBP5.23□□□□□ -1.57
PCDH9-201ENST00000377861 RGS9BPQ6ZS82 235 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 CCND2P30279 289 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 PBX1P40424 430 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 VAMP7P51809 220 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 ZNF543Q08ER8 600 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 RNF43Q68DV7 783 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 C16orf86Q6ZW13 317 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 ALLCQ8N6M5 410 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 MAB21L3Q8N8X9 362 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 ZNF577Q9BSK1 485 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 MPP6Q9NZW5 540 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 MYO3AQ8NEV4 1616 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 TBC1D12O60347 775 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 ARL4AP40617 200 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 NCAPG2Q86XI2 1143 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 C7orf57Q8NEG2 295 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 BEST2Q8NFU1 509 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 TNIP3Q96KP6 325 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 CYP11B2P19099 503 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 HPDP32754 393 aaPredicted RBP5.23□□□□□ -1.57
PCDH9-201ENST00000377861 ATP2B2Q01814 1243 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 EFCAB1Q9HAE3 211 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 CD4P01730 458 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 SLC26A3P40879 764 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 PDE1BQ01064 536 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 EXOC1LA0A1B0GW35 172 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 HELBQ8NG08 1087 aaPredicted RBP5.23□□□□□ -1.57
PCDH9-201ENST00000377861 MRM3Q9HC36 420 aaKnown RBP5.23□□□□□ -1.57
PCDH9-201ENST00000377861 OPLAHO14841 1288 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 MXRA7P84157 204 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 PIGOQ8TEQ8 1089 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 TSPEARQ8WU66 669 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 IRGQQ8WZA9 623 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 KCNK4Q9NYG8 393 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 FAM84BQ96KN1 310 aaPredicted RBP5.23□□□□□ -1.57
PCDH9-201ENST00000377861 GEMIN4P57678 1058 aaKnown RBP5.23□□□□□ -1.57
PCDH9-201ENST00000377861 SATB1Q01826 763 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 ANKRD40Q6AI12 368 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 VPS37AQ8NEZ2 397 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 TMEM8AQ9HCN3 771 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 PRDM10Q9NQV6 1147 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 SLC38A7Q9NVC3 462 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 PAIP2BQ9ULR5 123 aaKnown RBP5.23□□□□□ -1.57
PCDH9-201ENST00000377861 VHLP40337 213 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 BTBD9Q96Q07 612 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 KARSQ15046 597 aaKnown RBP5.22□□□□□ -1.57
PCDH9-201ENST00000377861 COMMD3-BMI1R4GMX3 469 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 A6NJR5 290 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 FDFT1P37268 417 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 SLFN13Q68D06 897 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 C11orf57Q6ZUT1 292 aaPredicted RBP5.22□□□□□ -1.57
PCDH9-201ENST00000377861 POLBP06746 335 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 ETFBP38117 255 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 ELMSAN1Q6PJG2 1045 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 TUBGCP4Q9UGJ1 667 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 SFI1A8K8P3 1242 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 DTNBO60941 627 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 A1BGP04217 495 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 NANOGNBQ7Z5D8 188 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 SPATA18Q8TC71 538 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 STK32AQ8WU08 396 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 TTC17Q96AE7 1141 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 SPC25Q9HBM1 224 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 RPS6KA2Q15349 733 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 ZNF557Q8N988 423 aaPredicted RBP5.22□□□□□ -1.57
PCDH9-201ENST00000377861 DDX50Q9BQ39 737 aaKnown RBP5.22□□□□□ -1.57
PCDH9-201ENST00000377861 NCKAP5LQ9HCH0 1330 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 TXNRD1Q16881 649 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 HIBCHQ6NVY1 386 aaPredicted RBP5.22□□□□□ -1.57
PCDH9-201ENST00000377861 STKLD1Q8NE28 680 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 CHST13Q8NET6 341 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 ANKRD36BP1Q96IX9 119 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 SLC4A7Q9Y6M7 1214 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 ROBO2Q9HCK4 1378 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 RAP1GAPP47736 663 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms