RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 CD4P01730 458 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 THP07101 528 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 GOLGA6DP0CG33 693 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 SMIM10L2AP0DMW4 78 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 SMIM10L2BP0DMW5 78 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 EZRP15311 586 aaKnown RBP9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 TBXAS1P24557 533 aaPredicted RBP9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 SNX1Q13596 522 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 DUSP28Q4G0W2 176 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 HAUS1Q96CS2 278 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 TEPSINQ96N21 525 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 GAD1Q99259 594 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 HAUS4Q9H6D7 363 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 AAASQ9NRG9 546 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 GOLGA6AQ9NYA3 693 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 DDX41Q9UJV9 622 aaKnown RBP9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 ANAPC7Q9UJX3 599 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 GLI3P10071 1580 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 TTC26A0AVF1 554 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 FGRP09769 529 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 VEGFBP49765 207 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 NOP14P78316 857 aaKnown RBP9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 CFAP221Q4G0U5 840 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 FAM102AQ5T9C2 384 aaPredicted RBP9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 BTBD8Q5XKL5 378 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 CC2D1AQ6P1N0 951 aaPredicted RBP9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 OTOP2Q7RTS6 562 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 VSTM4Q8IW00 320 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 KCTD6Q8NC69 237 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 SLC30A5Q8TAD4 765 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 HAS1Q92839 578 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 C17orf75Q9HAS0 396 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 C10orf71Q711Q0 1435 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 ALDH2P05091 517 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 SERPING1P05155 500 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 EIF4BP23588 611 aaKnown RBP9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 HOXA7P31268 230 aaPredicted RBP9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 FMO5P49326 533 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 LBX1P52954 281 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 KYAT1Q16773 422 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 CCDC14Q49A88 953 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 FBXL16Q8N461 479 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 CREBZFQ9NS37 354 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 FAN1Q9Y2M0 1017 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 HYOU1Q9Y4L1 999 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 UBIAD1Q9Y5Z9 338 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 SAR1BQ9Y6B6 198 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 CDY2AQ9Y6F7 541 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 CREB3O43889 395 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 ATP2A2P16615 1042 aaKnown RBP9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 SGSM1Q2NKQ1 1148 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 UBLCP1Q8WVY7 318 aaPredicted RBP9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 COLEC11Q9BWP8 271 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 PTPN22Q9Y2R2 807 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 AFDNP55196 1824 aaKnown RBP9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 SYNGAP1Q96PV0 1343 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 SOWAHBA6NEL2 793 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 ITGB3BPQ13352 177 aaPredicted RBP9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 IKBKEQ14164 716 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 DNAJC21Q5F1R6 531 aaKnown RBP9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 MPZL3Q6UWV2 235 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 ZNF720Q7Z2F6 126 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 FRMD5Q7Z6J6 570 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 CTAGE3PQ8IX95 158 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 KIAA0319LQ8IZA0 1049 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 HTATIP2Q9BUP3 242 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 IGFLR1Q9H665 355 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 DPP3Q9NY33 737 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 STRIP2Q9ULQ0 834 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 UBQLN1Q9UMX0 589 aaKnown RBP9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 NRCAMQ92823 1304 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 EXTL3O43909 919 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 FARP2O94887 1054 aaPredicted RBP9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 KRT1P04264 644 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 PNMA6AP0CW24 399 aaPredicted RBP9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 CD52P31358 61 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 SDC4P31431 198 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 GNL1P36915 607 aaPredicted RBP9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 TAF6P49848 677 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 TOGARAM2Q6ZUX3 1019 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 REM2Q8IYK8 340 aaPredicted RBP9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 UBA3Q8TBC4 463 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 PNMA5Q96PV4 448 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 HIPK3Q9H422 1215 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 SPATA31C2B4DYI2 1134 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 TISP43B9A030 160 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 PSMD10O75832 226 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 MOCS3O95396 460 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 FTLP02792 175 aaPredicted RBP9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 SNHG28P0DPA3 235 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 ADCY8P40145 1251 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 ACCSLQ4AC99 568 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 RASAL3Q86YV0 1011 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 SLAIN1Q8ND83 568 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 PDCD6IPQ8WUM4 868 aaKnown RBP9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 DPH5Q9H2P9 285 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 ARFGAP3Q9NP61 516 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 SRRDQ9UH36 339 aa9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 UTP11Q9Y3A2 253 aaKnown RBP9.04□□□□□ -0.96
CRNKL1-202ENST00000377340 FAM208AQ9UK61 1670 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms