RNA–Protein interactions for RNA: ENST00000377200.9

PTAR1-202, Transcript of protein prenyltransferase alpha subunit repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene PTAR1, Length 9,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTAR1-202ENST00000377200 ZNF444Q8N0Y2 327 aaPredicted RBP4.3□□□□□ -1.72
PTAR1-202ENST00000377200 JADE3Q92613 823 aa4.3□□□□□ -1.72
PTAR1-202ENST00000377200 CCDC85AQ96PX6 553 aaPredicted RBP4.3□□□□□ -1.72
PTAR1-202ENST00000377200 SAYSD1Q9NPB0 183 aa4.3□□□□□ -1.72
PTAR1-202ENST00000377200 CEP72Q9P209 647 aa4.3□□□□□ -1.72
PTAR1-202ENST00000377200 NOC2LQ9Y3T9 749 aaKnown RBP4.3□□□□□ -1.72
PTAR1-202ENST00000377200 PCDHGC5Q9Y5F6 944 aa4.3□□□□□ -1.72
PTAR1-202ENST00000377200 TUBGCP6Q96RT7 1819 aa4.3□□□□□ -1.72
PTAR1-202ENST00000377200 BBOX1O75936 387 aa4.3□□□□□ -1.72
PTAR1-202ENST00000377200 ALOX5P09917 674 aa4.3□□□□□ -1.72
PTAR1-202ENST00000377200 ERFP50548 548 aa4.3□□□□□ -1.72
PTAR1-202ENST00000377200 IL1RL1Q01638 556 aa4.3□□□□□ -1.72
PTAR1-202ENST00000377200 TOB2Q14106 344 aaPredicted RBP4.3□□□□□ -1.72
PTAR1-202ENST00000377200 KRT25Q7Z3Z0 450 aa4.3□□□□□ -1.72
PTAR1-202ENST00000377200 LRRC6Q86X45 466 aa4.3□□□□□ -1.72
PTAR1-202ENST00000377200 SPICE1Q8N0Z3 855 aa4.3□□□□□ -1.72
PTAR1-202ENST00000377200 TUBGCP5Q96RT8 1024 aa4.3□□□□□ -1.72
PTAR1-202ENST00000377200 DBNDD2Q9BQY9 259 aa4.3□□□□□ -1.72
PTAR1-202ENST00000377200 NDST4Q9H3R1 872 aa4.3□□□□□ -1.72
PTAR1-202ENST00000377200 VPS54Q9P1Q0 977 aa4.3□□□□□ -1.72
PTAR1-202ENST00000377200 STX18Q9P2W9 335 aaKnown RBP4.3□□□□□ -1.72
PTAR1-202ENST00000377200 RABL2AQ9UBK7 228 aaPredicted RBP4.3□□□□□ -1.72
PTAR1-202ENST00000377200 HERC5Q9UII4 1024 aaKnown RBP4.3□□□□□ -1.72
PTAR1-202ENST00000377200 RNF103-CHMP3A0A140T963 221 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 BTBD18B2RXH4 712 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 PDE8BO95263 885 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 POLR2EP19388 210 aaKnown RBP4.29□□□□□ -1.72
PTAR1-202ENST00000377200 CDK7P50613 346 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 FCHO2Q0JRZ9 810 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 PDAP1Q13442 181 aaKnown RBP4.29□□□□□ -1.72
PTAR1-202ENST00000377200 KRR1Q13601 381 aaKnown RBP4.29□□□□□ -1.72
PTAR1-202ENST00000377200 SF3B3Q15393 1217 aaKnown RBP4.29□□□□□ -1.72
PTAR1-202ENST00000377200 SLC10A5Q5PT55 438 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 PLEKHA7Q6IQ23 1121 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 USP38Q8NB14 1042 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 ST13P5Q8NFI4 369 aaPredicted RBP4.29□□□□□ -1.72
PTAR1-202ENST00000377200 VTI1AQ96AJ9 217 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 KLHL4Q9C0H6 718 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 HBS1LQ9Y450 684 aaKnown RBP4.29□□□□□ -1.72
PTAR1-202ENST00000377200 TTLL1O95922 423 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 FGFR4P22455 802 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 CDC25AP30304 524 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 GSTO1P78417 241 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 ART3Q13508 389 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 LONRF1Q17RB8 773 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 LETM2Q2VYF4 491 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 GALNT4Q8N4A0 578 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 KBTBD3Q8NAB2 608 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 SLC4A9Q96Q91 983 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 EYA3Q99504 573 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 HAUS7Q99871 368 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 HACD3Q9P035 362 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 A8MXQ7 604 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 H0YC42 278 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 EXOC3O60645 756 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 PRAMEP78395 509 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 PDE4BQ07343 736 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 SLC5A9Q2M3M2 681 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 SUSD4Q5VX71 490 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 SFR1Q86XK3 245 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 LRRC39Q96DD0 335 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 MAGEB18Q96M61 343 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 CYP4F11Q9HBI6 524 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 STMN3Q9NZ72 180 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 ZNF609O15014 1411 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 A0A1B0GW55 424 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 GNGT2O14610 69 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 PFDN6O15212 129 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 DUX4L2P0CJ85 424 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 DUX4L3P0CJ86 424 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 DUX4L4P0CJ87 422 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 DUX4L5P0CJ88 424 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 DUX4L6P0CJ89 424 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 DUX4L7P0CJ90 424 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 CHN2P52757 468 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 CNGA3Q16281 694 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 POTEAQ6S8J7 498 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 MTHFD1LQ6UB35 978 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 PAWRQ96IZ0 340 aaKnown RBP4.29□□□□□ -1.72
PTAR1-202ENST00000377200 GREM2Q9H772 168 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 ARPP21Q9UBL0 812 aaPredicted RBP4.29□□□□□ -1.72
PTAR1-202ENST00000377200 DUX4Q9UBX2 424 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 TRIM10Q9UDY6 481 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 DENND2AQ9ULE3 1009 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 DMTF1Q9Y222 760 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 ARAP2Q8WZ64 1704 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 RIC1Q4ADV7 1423 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 SPDYE5A6NIY4 337 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 RHOBTB1O94844 696 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 NTSR2O95665 410 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 FXR1P51114 621 aaKnown RBP eCLIP4.29□□□□□ -1.72
PTAR1-202ENST00000377200 GFPT1Q06210 699 aaPredicted RBP4.29□□□□□ -1.72
PTAR1-202ENST00000377200 CCDC103Q8IW40 242 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 ADSSL1Q8N142 457 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 GIPC3Q8TF64 312 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 SLC16A10Q8TF71 515 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 TTC25Q96NG3 672 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 TRABDQ9H4I3 376 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 PARVGQ9HBI0 331 aa4.29□□□□□ -1.72
PTAR1-202ENST00000377200 SENP1Q9P0U3 644 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms