RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 CD58P19256 250 aa13.85□□□□□ -0.19
USP11-204ENST00000377107 RDXP35241 583 aaKnown RBP13.85□□□□□ -0.19
USP11-204ENST00000377107 ZNF131P52739 623 aa13.85□□□□□ -0.19
USP11-204ENST00000377107 PSMC5P62195 406 aa13.85□□□□□ -0.19
USP11-204ENST00000377107 STYK1Q6J9G0 422 aa13.85□□□□□ -0.19
USP11-204ENST00000377107 SEPT14Q6ZU15 432 aa13.85□□□□□ -0.19
USP11-204ENST00000377107 SV2AQ7L0J3 742 aa13.85□□□□□ -0.19
USP11-204ENST00000377107 SEC16BQ96JE7 1060 aa13.85□□□□□ -0.19
USP11-204ENST00000377107 RAB20Q9NX57 234 aa13.85□□□□□ -0.19
USP11-204ENST00000377107 TTC7AQ9ULT0 858 aaPredicted RBP13.85□□□□□ -0.19
USP11-204ENST00000377107 WNT10BO00744 389 aa13.85□□□□□ -0.19
USP11-204ENST00000377107 KIAA0391O15091 583 aaKnown RBP13.85□□□□□ -0.19
USP11-204ENST00000377107 SCP2P22307 547 aa13.85□□□□□ -0.19
USP11-204ENST00000377107 KRT17Q04695 432 aa13.85□□□□□ -0.19
USP11-204ENST00000377107 FAM182AQ5T1J6 154 aa13.85□□□□□ -0.19
USP11-204ENST00000377107 PNMA8AQ86V59 439 aaPredicted RBP13.85□□□□□ -0.19
USP11-204ENST00000377107 ZKSCAN4Q969J2 545 aaPredicted RBP13.85□□□□□ -0.19
USP11-204ENST00000377107 RIPK3Q9Y572 518 aa13.85□□□□□ -0.19
USP11-204ENST00000377107 ASTN2O75129 1339 aaPredicted RBP13.85□□□□□ -0.19
USP11-204ENST00000377107 PASKQ96RG2 1323 aa13.85□□□□□ -0.19
USP11-204ENST00000377107 H0YGN5 161 aa13.85□□□□□ -0.19
USP11-204ENST00000377107 CCNE2O96020 404 aa13.85□□□□□ -0.19
USP11-204ENST00000377107 IFNB1P01574 187 aa13.85□□□□□ -0.19
USP11-204ENST00000377107 VCAM1P19320 739 aa13.85□□□□□ -0.19
USP11-204ENST00000377107 PIK3CAP42336 1068 aa13.85□□□□□ -0.19
USP11-204ENST00000377107 KIF22Q14807 665 aa13.85□□□□□ -0.19
USP11-204ENST00000377107 KYNUQ16719 465 aa13.85□□□□□ -0.19
USP11-204ENST00000377107 SNRNP48Q6IEG0 339 aaKnown RBP13.85□□□□□ -0.19
USP11-204ENST00000377107 TMEM270Q6UE05 265 aa13.85□□□□□ -0.19
USP11-204ENST00000377107 IFT74Q96LB3 600 aa13.85□□□□□ -0.19
USP11-204ENST00000377107 JPH2Q9BR39 696 aaPredicted RBP13.85□□□□□ -0.19
USP11-204ENST00000377107 NFS1Q9Y697 457 aa13.85□□□□□ -0.19
USP11-204ENST00000377107 MIF4GDA9UHW6 222 aaKnown RBP13.84□□□□□ -0.19
USP11-204ENST00000377107 ONECUT3O60422 494 aaPredicted RBP13.84□□□□□ -0.19
USP11-204ENST00000377107 RRM1P23921 792 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 CHRNA3P32297 505 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 NSFP46459 744 aaKnown RBP13.84□□□□□ -0.19
USP11-204ENST00000377107 OSTNP61366 133 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 ICE2Q659A1 982 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 SLC13A5Q86YT5 568 aaPredicted RBP13.84□□□□□ -0.19
USP11-204ENST00000377107 CD302Q8IX05 232 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 ZDHHC14Q8IZN3 488 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 LMO3Q8TAP4 145 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 BSNDQ8WZ55 320 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 MRIQ9BWK5 157 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 PABPC3Q9H361 631 aaKnown RBP13.84□□□□□ -0.19
USP11-204ENST00000377107 CHST7Q9NS84 486 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 PCDHB4Q9Y5E5 795 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 CES2O00748 559 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 CHRNB2P17787 502 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 ADSSP30520 456 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 COILP38432 576 aaPredicted RBP13.84□□□□□ -0.19
USP11-204ENST00000377107 FMO1Q01740 532 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 E2F5Q15329 346 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 SLC15A2Q16348 729 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 WDR78Q5VTH9 848 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 DUPD1Q68J44 220 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 ZNF365Q70YC5 407 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 ZBTB33Q86T24 672 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 FMNL3Q8IVF7 1028 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 C9orf72Q96LT7 481 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 STK32BQ9NY57 414 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 CTNNAL1Q9UBT7 734 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 THAP12O43422 761 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 DPEP1P16444 411 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 ANXA13P27216 316 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 POLGP54098 1239 aaPredicted RBP13.84□□□□□ -0.19
USP11-204ENST00000377107 HMGCS2P54868 508 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 PGM5Q15124 567 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 MMS22LQ6ZRQ5 1243 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 PARD3BQ8TEW8 1205 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 ZBTB45Q96K62 511 aaPredicted RBP13.84□□□□□ -0.19
USP11-204ENST00000377107 PLVAPQ9BX97 442 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 TBC1D22BQ9NU19 505 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 HAUS2Q9NVX0 235 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 SAMD15Q9P1V8 674 aa13.84□□□□□ -0.19
USP11-204ENST00000377107 NCANO14594 1321 aa13.83□□□□□ -0.2
USP11-204ENST00000377107 CXCL9Q07325 125 aa13.83□□□□□ -0.2
USP11-204ENST00000377107 SPDYE2Q495Y8 402 aa13.83□□□□□ -0.2
USP11-204ENST00000377107 XPO6Q96QU8 1125 aaKnown RBP13.83□□□□□ -0.2
USP11-204ENST00000377107 CD248Q9HCU0 757 aa13.83□□□□□ -0.2
USP11-204ENST00000377107 KCND2Q9NZV8 630 aa13.83□□□□□ -0.2
USP11-204ENST00000377107 DHX15O43143 795 aaKnown RBP13.83□□□□□ -0.2
USP11-204ENST00000377107 NR3C2P08235 984 aa13.83□□□□□ -0.2
USP11-204ENST00000377107 DHX34Q14147 1143 aaKnown RBP13.83□□□□□ -0.2
USP11-204ENST00000377107 ANO5Q75V66 913 aa13.83□□□□□ -0.2
USP11-204ENST00000377107 CCDC13Q8IYE1 715 aa13.83□□□□□ -0.2
USP11-204ENST00000377107 PDCD2LQ9BRP1 358 aa13.83□□□□□ -0.2
USP11-204ENST00000377107 FAM187AA6NFU0 413 aa13.82□□□□□ -0.2
USP11-204ENST00000377107 O00370 1275 aa13.82□□□□□ -0.2
USP11-204ENST00000377107 ECM2O94769 699 aaPredicted RBP13.82□□□□□ -0.2
USP11-204ENST00000377107 STRN3Q13033 797 aa13.82□□□□□ -0.2
USP11-204ENST00000377107 C1orf220Q5T0J3 134 aa13.82□□□□□ -0.2
USP11-204ENST00000377107 SCARA5Q6ZMJ2 495 aa13.82□□□□□ -0.2
USP11-204ENST00000377107 CDR2LQ86X02 465 aaPredicted RBP13.82□□□□□ -0.2
USP11-204ENST00000377107 LRRC34Q8IZ02 419 aa13.82□□□□□ -0.2
USP11-204ENST00000377107 CHMP6Q96FZ7 201 aa13.82□□□□□ -0.2
USP11-204ENST00000377107 IWS1Q96ST2 819 aa13.82□□□□□ -0.2
USP11-204ENST00000377107 LTBP4Q8N2S1 1624 aa13.82□□□□□ -0.2
USP11-204ENST00000377107 CREB1P16220 341 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms