RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 LINC00116Q8NCU8 138 aa17.86■□□□□ 0.45
VARS-215ENST00000375663 ATP6V0A4Q9HBG4 840 aa17.86■□□□□ 0.45
VARS-215ENST00000375663 RAVER2Q9HCJ3 691 aaKnown RBP17.86■□□□□ 0.45
VARS-215ENST00000375663 ALG13Q9NP73 1137 aaKnown RBP17.86■□□□□ 0.45
VARS-215ENST00000375663 AGPAT3Q9NRZ7 376 aa17.86■□□□□ 0.45
VARS-215ENST00000375663 CCND1P24385 295 aa17.86■□□□□ 0.45
VARS-215ENST00000375663 P3H1Q32P28 736 aa17.86■□□□□ 0.45
VARS-215ENST00000375663 SH2D4BQ5SQS7 431 aa17.86■□□□□ 0.45
VARS-215ENST00000375663 THNSL1Q8IYQ7 743 aa17.86■□□□□ 0.45
VARS-215ENST00000375663 CCNYQ8ND76 341 aa17.86■□□□□ 0.45
VARS-215ENST00000375663 CPA5Q8WXQ8 436 aa17.86■□□□□ 0.45
VARS-215ENST00000375663 CCDC97Q96F63 343 aaPredicted RBP17.86■□□□□ 0.45
VARS-215ENST00000375663 FAM118BQ9BPY3 351 aa17.86■□□□□ 0.45
VARS-215ENST00000375663 ZSWIM1Q9BR11 485 aa17.86■□□□□ 0.45
VARS-215ENST00000375663 RUSC1Q9BVN2 902 aa17.86■□□□□ 0.45
VARS-215ENST00000375663 KLHL11Q9NVR0 708 aa17.86■□□□□ 0.45
VARS-215ENST00000375663 EPHB6O15197 1021 aa17.85■□□□□ 0.45
VARS-215ENST00000375663 ITGA8P53708 1063 aa17.85■□□□□ 0.45
VARS-215ENST00000375663 PDZD4Q76G19 769 aaPredicted RBP17.85■□□□□ 0.45
VARS-215ENST00000375663 LDHDQ86WU2 507 aa17.85■□□□□ 0.45
VARS-215ENST00000375663 TMEM117Q9H0C3 514 aa17.85■□□□□ 0.45
VARS-215ENST00000375663 DDX20Q9UHI6 824 aaKnown RBP17.85■□□□□ 0.45
VARS-215ENST00000375663 GOLGA8RI6L899 631 aa17.85■□□□□ 0.45
VARS-215ENST00000375663 GIPC1O14908 333 aa17.85■□□□□ 0.45
VARS-215ENST00000375663 KRT38O76015 456 aa17.85■□□□□ 0.45
VARS-215ENST00000375663 GIT2Q14161 759 aa17.85■□□□□ 0.45
VARS-215ENST00000375663 TFDP1Q14186 410 aa17.85■□□□□ 0.45
VARS-215ENST00000375663 TTMPQ5BVD1 217 aa17.85■□□□□ 0.45
VARS-215ENST00000375663 GDF3Q9NR23 364 aa17.85■□□□□ 0.45
VARS-215ENST00000375663 GABBR1Q9UBS5 961 aa17.85■□□□□ 0.45
VARS-215ENST00000375663 SMG5Q9UPR3 1016 aaKnown RBP17.85■□□□□ 0.45
VARS-215ENST00000375663 TFDP2Q14188 446 aa17.85■□□□□ 0.45
VARS-215ENST00000375663 HIF1AQ16665 826 aa17.85■□□□□ 0.45
VARS-215ENST00000375663 GRAMD1BQ3KR37 738 aa17.85■□□□□ 0.45
VARS-215ENST00000375663 HSP90AA5PQ58FG0 334 aa17.85■□□□□ 0.45
VARS-215ENST00000375663 FAM161BQ96MY7 647 aa17.85■□□□□ 0.45
VARS-215ENST00000375663 RIOX1Q9H6W3 641 aa17.85■□□□□ 0.45
VARS-215ENST00000375663 ZNF408Q9H9D4 720 aa17.85■□□□□ 0.45
VARS-215ENST00000375663 CACNA1FO60840 1977 aa17.85■□□□□ 0.45
VARS-215ENST00000375663 F8VZ95 297 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 LPXNO60711 386 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 MMP10P09238 476 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 NPEPPSP55786 919 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 IL17AQ16552 155 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 SNRNP35Q16560 246 aaKnown RBP17.84■□□□□ 0.45
VARS-215ENST00000375663 ANKMY2Q8IV38 441 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 GPD1LQ8N335 351 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 OSBPL8Q9BZF1 889 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 SMYD2Q9NRG4 433 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 FEM1BQ9UK73 627 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 G3BP2Q9UN86 482 aaKnown RBP17.84■□□□□ 0.45
VARS-215ENST00000375663 TBXAS1P24557 533 aaPredicted RBP17.84■□□□□ 0.45
VARS-215ENST00000375663 POLD1P28340 1107 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 ZNF844Q08AG5 666 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 SEPT6Q14141 434 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 CDC42EP5Q6NZY7 148 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 NCAPG2Q86XI2 1143 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 IRF2BP1Q8IU81 584 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 KCND2Q9NZV8 630 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 PRR12Q9ULL5 1215 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 SFNP31947 248 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 PPP6R3Q5H9R7 873 aaPredicted RBP17.84■□□□□ 0.45
VARS-215ENST00000375663 RAPH1Q70E73 1250 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 AGGF1Q8N302 714 aaeCLIP17.84■□□□□ 0.45
VARS-215ENST00000375663 C7orf31Q8N865 590 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 NSMCE1Q8WV22 266 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 MASTLQ96GX5 879 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 FAM129AQ9BZQ8 928 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 SLC9A2Q9UBY0 812 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 MSH4O15457 936 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 GPC4O75487 556 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 RARGP13631 454 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 YWHABP31946 246 aaKnown RBP17.84■□□□□ 0.45
VARS-215ENST00000375663 RPS6KA2Q15349 733 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 SURF1Q15526 300 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 ZNF667Q5HYK9 610 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 MIIPQ5JXC2 388 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 C1orf146Q5VVC0 180 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 CYFIP1Q7L576 1253 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 DNAAF3Q8N9W5 541 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 HEXIM2Q96MH2 286 aaKnown RBP17.84■□□□□ 0.45
VARS-215ENST00000375663 TTC1Q99614 292 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 KLC2Q9H0B6 622 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 NEU2Q9Y3R4 380 aa17.84■□□□□ 0.45
VARS-215ENST00000375663 ADRA2BP18089 450 aa17.83■□□□□ 0.45
VARS-215ENST00000375663 ECE1P42892 770 aa17.83■□□□□ 0.45
VARS-215ENST00000375663 ZNF662Q6ZS27 426 aa17.83■□□□□ 0.45
VARS-215ENST00000375663 RHPN2Q8IUC4 686 aa17.83■□□□□ 0.45
VARS-215ENST00000375663 SP8Q8IXZ3 490 aa17.83■□□□□ 0.45
VARS-215ENST00000375663 DEPDC1BQ8WUY9 529 aa17.83■□□□□ 0.45
VARS-215ENST00000375663 LBHD1Q9BQE6 289 aaPredicted RBP17.83■□□□□ 0.45
VARS-215ENST00000375663 POLR3CQ9BUI4 534 aaPredicted RBP17.83■□□□□ 0.45
VARS-215ENST00000375663 HEY1Q9Y5J3 304 aa17.83■□□□□ 0.45
VARS-215ENST00000375663 A0A0A6YYK5 440 aaPredicted RBP17.83■□□□□ 0.44
VARS-215ENST00000375663 KRT7P08729 469 aa17.83■□□□□ 0.44
VARS-215ENST00000375663 KITP10721 976 aa17.83■□□□□ 0.44
VARS-215ENST00000375663 FNTAP49354 379 aa17.83■□□□□ 0.44
VARS-215ENST00000375663 MMEL1Q495T6 779 aa17.83■□□□□ 0.44
VARS-215ENST00000375663 PRR5LQ6MZQ0 368 aa17.83■□□□□ 0.44
VARS-215ENST00000375663 PARVAQ9NVD7 372 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms